data_2BD2 # _model_server_result.job_id hhydlG-JT4ljuW5sYquPCA _model_server_result.datetime_utc '2024-10-12 15:32:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bd2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":260}' # _entry.id 2BD2 # _exptl.entry_id 2BD2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BD2 _cell.length_a 50.195 _cell.length_b 57.883 _cell.length_c 74.605 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BD2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 30 A CYS 42 1_555 B SG CYS 46 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 127 A CYS 136 1_555 B SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 B SG CYS 158 A CYS 168 1_555 B SG CYS 174 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 B SG CYS 184 A CYS 191 1_555 B SG CYS 214 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 A C ILE 7 P ILE 7 1_555 A N ARG 8 P ARG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 A C ILE 7 P ILE 7 1_555 B OG SER 188 A SER 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale3 A C ARG 8 P ARG 8 1_555 A N PHE 9 P PHE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 B OE1 GLU 59 A GLU 70 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc2 B OE2 GLU 59 A GLU 70 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc3 B O ASN 61 A ASN 72 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc4 B O GLN 64 A GLN 75 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc5 B ND2 ASN 66 A ASN 77 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc6 B OE1 GLU 69 A GLU 80 1_555 C CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc7 C CA CA . A CA 260 1_555 E O HOH . A HOH 1110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2BD2 _atom_sites.fract_transf_matrix[1][1] 0.01992 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 260 260 CA CA . D 4 SO4 A 1 270 270 SO4 SO4 . E 5 HOH A 1 1003 1 HOH HOH . E 5 HOH A 2 1004 2 HOH HOH . E 5 HOH A 3 1005 3 HOH HOH . E 5 HOH A 4 1006 4 HOH HOH . E 5 HOH A 5 1007 5 HOH HOH . E 5 HOH A 6 1008 6 HOH HOH . E 5 HOH A 7 1009 7 HOH HOH . E 5 HOH A 8 1010 8 HOH HOH . E 5 HOH A 9 1011 9 HOH HOH . E 5 HOH A 10 1012 10 HOH HOH . E 5 HOH A 11 1013 11 HOH HOH . E 5 HOH A 12 1014 12 HOH HOH . E 5 HOH A 13 1015 13 HOH HOH . E 5 HOH A 14 1016 14 HOH HOH . E 5 HOH A 15 1017 15 HOH HOH . E 5 HOH A 16 1018 16 HOH HOH . E 5 HOH A 17 1019 17 HOH HOH . E 5 HOH A 18 1020 18 HOH HOH . E 5 HOH A 19 1021 19 HOH HOH . E 5 HOH A 20 1022 20 HOH HOH . E 5 HOH A 21 1023 21 HOH HOH . E 5 HOH A 22 1024 22 HOH HOH . E 5 HOH A 23 1025 23 HOH HOH . E 5 HOH A 24 1026 24 HOH HOH . E 5 HOH A 25 1027 25 HOH HOH . E 5 HOH A 26 1028 26 HOH HOH . E 5 HOH A 27 1029 27 HOH HOH . E 5 HOH A 28 1030 28 HOH HOH . E 5 HOH A 29 1031 29 HOH HOH . E 5 HOH A 30 1032 30 HOH HOH . E 5 HOH A 31 1033 31 HOH HOH . E 5 HOH A 32 1034 32 HOH HOH . E 5 HOH A 33 1035 33 HOH HOH . E 5 HOH A 34 1036 34 HOH HOH . E 5 HOH A 35 1037 35 HOH HOH . E 5 HOH A 36 1038 36 HOH HOH . E 5 HOH A 37 1039 37 HOH HOH . E 5 HOH A 38 1040 38 HOH HOH . E 5 HOH A 39 1041 39 HOH HOH . E 5 HOH A 40 1042 40 HOH HOH . E 5 HOH A 41 1043 41 HOH HOH . E 5 HOH A 42 1044 42 HOH HOH . E 5 HOH A 43 1045 43 HOH HOH . E 5 HOH A 44 1046 44 HOH HOH . E 5 HOH A 45 1047 45 HOH HOH . E 5 HOH A 46 1048 46 HOH HOH . E 5 HOH A 47 1049 47 HOH HOH . E 5 HOH A 48 1050 48 HOH HOH . E 5 HOH A 49 1051 49 HOH HOH . E 5 HOH A 50 1052 50 HOH HOH . E 5 HOH A 51 1053 51 HOH HOH . E 5 HOH A 52 1054 52 HOH HOH . E 5 HOH A 53 1055 53 HOH HOH . E 5 HOH A 54 1056 54 HOH HOH . E 5 HOH A 55 1057 55 HOH HOH . E 5 HOH A 56 1058 56 HOH HOH . E 5 HOH A 57 1059 57 HOH HOH . E 5 HOH A 58 1060 58 HOH HOH . E 5 HOH A 59 1061 59 HOH HOH . E 5 HOH A 60 1062 60 HOH HOH . E 5 HOH A 61 1063 61 HOH HOH . E 5 HOH A 62 1064 62 HOH HOH . E 5 HOH A 63 1065 63 HOH HOH . E 5 HOH A 64 1066 64 HOH HOH . E 5 HOH A 65 1067 65 HOH HOH . E 5 HOH A 66 1068 66 HOH HOH . E 5 HOH A 67 1069 67 HOH HOH . E 5 HOH A 68 1070 68 HOH HOH . E 5 HOH A 69 1071 69 HOH HOH . E 5 HOH A 70 1072 70 HOH HOH . E 5 HOH A 71 1073 71 HOH HOH . E 5 HOH A 72 1074 72 HOH HOH . E 5 HOH A 73 1075 73 HOH HOH . E 5 HOH A 74 1076 74 HOH HOH . E 5 HOH A 75 1077 75 HOH HOH . E 5 HOH A 76 1078 76 HOH HOH . E 5 HOH A 77 1079 77 HOH HOH . E 5 HOH A 78 1080 78 HOH HOH . E 5 HOH A 79 1081 79 HOH HOH . E 5 HOH A 80 1082 80 HOH HOH . E 5 HOH A 81 1083 81 HOH HOH . E 5 HOH A 82 1084 82 HOH HOH . E 5 HOH A 83 1085 83 HOH HOH . E 5 HOH A 84 1086 84 HOH HOH . E 5 HOH A 85 1087 85 HOH HOH . E 5 HOH A 86 1088 86 HOH HOH . E 5 HOH A 87 1089 87 HOH HOH . E 5 HOH A 88 1090 88 HOH HOH . E 5 HOH A 89 1091 89 HOH HOH . E 5 HOH A 90 1092 90 HOH HOH . E 5 HOH A 91 1093 91 HOH HOH . E 5 HOH A 92 1094 92 HOH HOH . E 5 HOH A 93 1095 93 HOH HOH . E 5 HOH A 94 1096 94 HOH HOH . E 5 HOH A 95 1097 95 HOH HOH . E 5 HOH A 96 1098 96 HOH HOH . E 5 HOH A 97 1099 97 HOH HOH . E 5 HOH A 98 1100 98 HOH HOH . E 5 HOH A 99 1101 99 HOH HOH . E 5 HOH A 100 1102 100 HOH HOH . E 5 HOH A 101 1103 101 HOH HOH . E 5 HOH A 102 1104 102 HOH HOH . E 5 HOH A 103 1105 103 HOH HOH . E 5 HOH A 104 1106 104 HOH HOH . E 5 HOH A 105 1107 105 HOH HOH . E 5 HOH A 106 1108 106 HOH HOH . E 5 HOH A 107 1109 107 HOH HOH . E 5 HOH A 108 1110 108 HOH HOH . E 5 HOH A 109 1111 109 HOH HOH . E 5 HOH A 110 1112 110 HOH HOH . E 5 HOH A 111 1113 111 HOH HOH . E 5 HOH A 112 1114 112 HOH HOH . E 5 HOH A 113 1115 113 HOH HOH . E 5 HOH A 114 1116 114 HOH HOH . E 5 HOH A 115 1117 115 HOH HOH . E 5 HOH A 116 1118 116 HOH HOH . E 5 HOH A 117 1119 117 HOH HOH . E 5 HOH A 118 1120 118 HOH HOH . E 5 HOH A 119 1121 119 HOH HOH . E 5 HOH A 120 1122 120 HOH HOH . E 5 HOH A 121 1123 121 HOH HOH . E 5 HOH A 122 1124 122 HOH HOH . E 5 HOH A 123 1125 123 HOH HOH . E 5 HOH A 124 1126 124 HOH HOH . E 5 HOH A 125 1127 125 HOH HOH . E 5 HOH A 126 1128 126 HOH HOH . E 5 HOH A 127 1129 127 HOH HOH . E 5 HOH A 128 1130 128 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.07 _atom_site.Cartn_y 37.565 _atom_site.Cartn_z 29.773 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 260 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #