data_2BD9
#
_model_server_result.job_id            kMzoLYa2zpGvIQ9dVIWzIQ 
_model_server_result.datetime_utc      '2024-12-03 15:34:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bd9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":260}' 
#
_entry.id    2BD9 
#
_exptl.entry_id    2BD9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BD9 
_cell.length_a            51.38 
_cell.length_b            57.59 
_cell.length_c            74.758 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BD9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 30 A CYS 42 1_555 A SG CYS 46 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 174 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 214 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc1 A OE1 GLU 59 A GLU 70 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc2 A OE2 GLU 59 A GLU 70 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? 
metalc ? metalc3 A O ASN 61 A ASN 72 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc4 A O GLN 64 A GLN 75 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 A ND2 ASN 66 A ASN 77 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc6 A OE1 GLU 69 A GLU 80 1_555 B CA CA . A CA 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc7 B CA CA . A CA 260 1_555 D O HOH . A HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2BD9 
_atom_sites.fract_transf_matrix[1][1]    0.01946 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01736 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01338 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 260 260 CA CA . 
C 3 SO4 A 1 270 270 SO4 SO4 . 
D 4 HOH A 1 271 1 HOH HOH . 
D 4 HOH A 2 272 2 HOH HOH . 
D 4 HOH A 3 273 3 HOH HOH . 
D 4 HOH A 4 274 4 HOH HOH . 
D 4 HOH A 5 275 5 HOH HOH . 
D 4 HOH A 6 276 6 HOH HOH . 
D 4 HOH A 7 277 7 HOH HOH . 
D 4 HOH A 8 278 8 HOH HOH . 
D 4 HOH A 9 279 9 HOH HOH . 
D 4 HOH A 10 280 10 HOH HOH . 
D 4 HOH A 11 281 11 HOH HOH . 
D 4 HOH A 12 282 12 HOH HOH . 
D 4 HOH A 13 283 13 HOH HOH . 
D 4 HOH A 14 284 14 HOH HOH . 
D 4 HOH A 15 285 15 HOH HOH . 
D 4 HOH A 16 286 16 HOH HOH . 
D 4 HOH A 17 287 17 HOH HOH . 
D 4 HOH A 18 288 18 HOH HOH . 
D 4 HOH A 19 289 19 HOH HOH . 
D 4 HOH A 20 290 20 HOH HOH . 
D 4 HOH A 21 291 21 HOH HOH . 
D 4 HOH A 22 292 22 HOH HOH . 
D 4 HOH A 23 293 23 HOH HOH . 
D 4 HOH A 24 294 24 HOH HOH . 
D 4 HOH A 25 295 25 HOH HOH . 
D 4 HOH A 26 296 26 HOH HOH . 
D 4 HOH A 27 297 27 HOH HOH . 
D 4 HOH A 28 298 28 HOH HOH . 
D 4 HOH A 29 299 29 HOH HOH . 
D 4 HOH A 30 300 30 HOH HOH . 
D 4 HOH A 31 301 31 HOH HOH . 
D 4 HOH A 32 302 32 HOH HOH . 
D 4 HOH A 33 303 33 HOH HOH . 
D 4 HOH A 34 304 34 HOH HOH . 
D 4 HOH A 35 305 35 HOH HOH . 
D 4 HOH A 36 306 36 HOH HOH . 
D 4 HOH A 37 307 37 HOH HOH . 
D 4 HOH A 38 308 38 HOH HOH . 
D 4 HOH A 39 309 39 HOH HOH . 
D 4 HOH A 40 310 40 HOH HOH . 
D 4 HOH A 41 311 41 HOH HOH . 
D 4 HOH A 42 312 42 HOH HOH . 
D 4 HOH A 43 313 43 HOH HOH . 
D 4 HOH A 44 314 44 HOH HOH . 
D 4 HOH A 45 315 45 HOH HOH . 
D 4 HOH A 46 316 46 HOH HOH . 
D 4 HOH A 47 317 47 HOH HOH . 
D 4 HOH A 48 318 48 HOH HOH . 
D 4 HOH A 49 319 49 HOH HOH . 
D 4 HOH A 50 320 50 HOH HOH . 
D 4 HOH A 51 321 51 HOH HOH . 
D 4 HOH A 52 322 52 HOH HOH . 
D 4 HOH A 53 323 53 HOH HOH . 
D 4 HOH A 54 324 54 HOH HOH . 
D 4 HOH A 55 325 55 HOH HOH . 
D 4 HOH A 56 326 56 HOH HOH . 
D 4 HOH A 57 327 57 HOH HOH . 
D 4 HOH A 58 328 58 HOH HOH . 
D 4 HOH A 59 329 59 HOH HOH . 
D 4 HOH A 60 330 60 HOH HOH . 
D 4 HOH A 61 331 61 HOH HOH . 
D 4 HOH A 62 332 62 HOH HOH . 
D 4 HOH A 63 333 63 HOH HOH . 
D 4 HOH A 64 334 64 HOH HOH . 
D 4 HOH A 65 335 65 HOH HOH . 
D 4 HOH A 66 336 66 HOH HOH . 
D 4 HOH A 67 337 67 HOH HOH . 
D 4 HOH A 68 338 68 HOH HOH . 
D 4 HOH A 69 339 69 HOH HOH . 
D 4 HOH A 70 340 70 HOH HOH . 
D 4 HOH A 71 341 71 HOH HOH . 
D 4 HOH A 72 342 72 HOH HOH . 
D 4 HOH A 73 343 73 HOH HOH . 
D 4 HOH A 74 344 74 HOH HOH . 
D 4 HOH A 75 345 75 HOH HOH . 
D 4 HOH A 76 346 76 HOH HOH . 
D 4 HOH A 77 347 77 HOH HOH . 
D 4 HOH A 78 348 78 HOH HOH . 
D 4 HOH A 79 349 79 HOH HOH . 
D 4 HOH A 80 350 80 HOH HOH . 
D 4 HOH A 81 351 81 HOH HOH . 
D 4 HOH A 82 352 82 HOH HOH . 
D 4 HOH A 83 353 83 HOH HOH . 
D 4 HOH A 84 354 84 HOH HOH . 
D 4 HOH A 85 355 85 HOH HOH . 
D 4 HOH A 86 356 86 HOH HOH . 
D 4 HOH A 87 357 87 HOH HOH . 
D 4 HOH A 88 358 88 HOH HOH . 
D 4 HOH A 89 359 89 HOH HOH . 
D 4 HOH A 90 360 90 HOH HOH . 
D 4 HOH A 91 361 91 HOH HOH . 
D 4 HOH A 92 362 92 HOH HOH . 
D 4 HOH A 93 363 93 HOH HOH . 
D 4 HOH A 94 364 94 HOH HOH . 
D 4 HOH A 95 365 95 HOH HOH . 
D 4 HOH A 96 366 96 HOH HOH . 
D 4 HOH A 97 367 97 HOH HOH . 
D 4 HOH A 98 368 98 HOH HOH . 
D 4 HOH A 99 369 99 HOH HOH . 
D 4 HOH A 100 370 100 HOH HOH . 
D 4 HOH A 101 371 101 HOH HOH . 
D 4 HOH A 102 372 102 HOH HOH . 
D 4 HOH A 103 373 103 HOH HOH . 
D 4 HOH A 104 374 104 HOH HOH . 
D 4 HOH A 105 375 105 HOH HOH . 
D 4 HOH A 106 376 106 HOH HOH . 
D 4 HOH A 107 377 107 HOH HOH . 
D 4 HOH A 108 378 108 HOH HOH . 
D 4 HOH A 109 379 109 HOH HOH . 
D 4 HOH A 110 380 110 HOH HOH . 
D 4 HOH A 111 381 111 HOH HOH . 
D 4 HOH A 112 382 112 HOH HOH . 
D 4 HOH A 113 383 113 HOH HOH . 
D 4 HOH A 114 384 114 HOH HOH . 
D 4 HOH A 115 385 115 HOH HOH . 
D 4 HOH A 116 386 116 HOH HOH . 
D 4 HOH A 117 387 117 HOH HOH . 
D 4 HOH A 118 388 118 HOH HOH . 
D 4 HOH A 119 389 119 HOH HOH . 
D 4 HOH A 120 390 120 HOH HOH . 
D 4 HOH A 121 391 121 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               5.243 
_atom_site.Cartn_y               37.293 
_atom_site.Cartn_z               29.787 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.07 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           260 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           213 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#