data_2BDO # _model_server_result.job_id 0xLt4JYCj9TlVWnqwZPLgg _model_server_result.datetime_utc '2024-11-14 23:41:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bdo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":222}' # _entry.id 2BDO # _exptl.entry_id 2BDO _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BDO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BDO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 46 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 122 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C11 _struct_conn.ptnr2_label_comp_id BTN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BTN _struct_conn.ptnr2_auth_seq_id 222 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.329 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 2BDO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id BTN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 222 _pdbx_nonpoly_scheme.auth_seq_num 122 _pdbx_nonpoly_scheme.pdb_mon_id BTN _pdbx_nonpoly_scheme.auth_mon_id BTN _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . B 2 -14.78 -9.676 2.096 1 0 ? C11 BTN 222 A 1 HETATM 2 O O11 BTN . . . B 2 -15.077 -10.77 1.614 1 0 ? O11 BTN 222 A 1 HETATM 3 C C10 BTN . . . B 2 -15.012 -9.449 3.577 1 0 ? C10 BTN 222 A 1 HETATM 4 C C9 BTN . . . B 2 -13.872 -8.688 4.234 1 0 ? C9 BTN 222 A 1 HETATM 5 C C8 BTN . . . B 2 -12.53 -9.347 3.958 1 0 ? C8 BTN 222 A 1 HETATM 6 C C7 BTN . . . B 2 -11.421 -8.722 4.789 1 0 ? C7 BTN 222 A 1 HETATM 7 C C2 BTN . . . B 2 -10.022 -8.94 4.204 1 0 ? C2 BTN 222 A 1 HETATM 8 S S1 BTN . . . B 2 -9.351 -10.646 4.367 1 0 ? S1 BTN 222 A 1 HETATM 9 C C6 BTN . . . B 2 -7.623 -10.027 4.256 1 0 ? C6 BTN 222 A 1 HETATM 10 C C5 BTN . . . B 2 -7.619 -8.697 5.001 1 0 ? C5 BTN 222 A 1 HETATM 11 N N1 BTN . . . B 2 -7.471 -8.866 6.443 1 0 ? N1 BTN 222 A 1 HETATM 12 C C3 BTN . . . B 2 -8.504 -8.421 7.16 1 0 ? C3 BTN 222 A 1 HETATM 13 O O3 BTN . . . B 2 -8.614 -8.454 8.385 1 0 ? O3 BTN 222 A 1 HETATM 14 N N2 BTN . . . B 2 -9.397 -7.938 6.298 1 0 ? N2 BTN 222 A 1 HETATM 15 C C4 BTN . . . B 2 -8.992 -8.035 4.901 1 0 ? C4 BTN 222 A 1 HETATM 16 H H101 BTN . . . B 2 -15.117 -10.409 4.06 1 0 ? H101 BTN 222 A 1 HETATM 17 H H102 BTN . . . B 2 -15.922 -8.884 3.701 1 0 ? H102 BTN 222 A 1 HETATM 18 H H91 BTN . . . B 2 -14.038 -8.663 5.302 1 0 ? H91 BTN 222 A 1 HETATM 19 H H92 BTN . . . B 2 -13.853 -7.681 3.848 1 0 ? H92 BTN 222 A 1 HETATM 20 H H81 BTN . . . B 2 -12.293 -9.231 2.91 1 0 ? H81 BTN 222 A 1 HETATM 21 H H82 BTN . . . B 2 -12.599 -10.397 4.199 1 0 ? H82 BTN 222 A 1 HETATM 22 H H71 BTN . . . B 2 -11.456 -9.153 5.779 1 0 ? H71 BTN 222 A 1 HETATM 23 H H72 BTN . . . B 2 -11.607 -7.662 4.86 1 0 ? H72 BTN 222 A 1 HETATM 24 H H2 BTN . . . B 2 -10.036 -8.689 3.154 1 0 ? H2 BTN 222 A 1 HETATM 25 H H61 BTN . . . B 2 -7.314 -9.856 3.235 1 0 ? H61 BTN 222 A 1 HETATM 26 H H62 BTN . . . B 2 -6.919 -10.693 4.729 1 0 ? H62 BTN 222 A 1 HETATM 27 H H5 BTN . . . B 2 -6.859 -8.03 4.622 1 0 ? H5 BTN 222 A 1 HETATM 28 H HN1 BTN . . . B 2 -6.677 -9.272 6.852 1 0 ? HN1 BTN 222 A 1 HETATM 29 H HN2 BTN . . . B 2 -10.252 -7.55 6.579 1 0 ? HN2 BTN 222 A 1 HETATM 30 H H4 BTN . . . B 2 -8.934 -7.066 4.436 1 0 ? H4 BTN 222 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 6506 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #