data_2BE7 # _model_server_result.job_id CHpp9ejdx8Zz2Ys15vxBAQ _model_server_result.datetime_utc '2025-04-06 18:16:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2be7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1108}' # _entry.id 2BE7 # _exptl.entry_id 2BE7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2BE7 _cell.length_a 129.238 _cell.length_b 129.238 _cell.length_c 207.232 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BE7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -69.077333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D SG CYS 108 D CYS 108 1_555 J ZN ZN . D ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc2 D SG CYS 113 D CYS 113 1_555 J ZN ZN . D ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc3 D SG CYS 137 D CYS 137 1_555 J ZN ZN . D ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc4 D SG CYS 140 D CYS 140 1_555 J ZN ZN . D ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 E SG CYS 108 E CYS 108 1_555 K ZN ZN . E ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc6 E SG CYS 113 E CYS 113 1_555 K ZN ZN . E ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc7 E SG CYS 137 E CYS 137 1_555 K ZN ZN . E ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc8 E SG CYS 140 E CYS 140 1_555 K ZN ZN . E ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc9 F SG CYS 108 F CYS 108 1_555 L ZN ZN . F ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc10 F SG CYS 113 F CYS 113 1_555 L ZN ZN . F ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc11 F SG CYS 137 F CYS 137 1_555 L ZN ZN . F ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc12 F SG CYS 140 F CYS 140 1_555 L ZN ZN . F ZN 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2BE7 _atom_sites.fract_transf_matrix[1][1] 0.007738 _atom_sites.fract_transf_matrix[1][2] 0.004467 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004826 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 SO4 A 1 311 1 SO4 SO4 . H 3 SO4 B 1 311 3 SO4 SO4 . I 3 SO4 C 1 311 2 SO4 SO4 . J 4 ZN D 1 1108 109 ZN ZN2 . K 4 ZN E 1 1108 109 ZN ZN2 . L 4 ZN F 1 1108 109 ZN ZN2 . M 5 HOH A 1 312 13 HOH HOH . M 5 HOH A 2 313 18 HOH HOH . M 5 HOH A 3 314 23 HOH HOH . M 5 HOH A 4 315 25 HOH HOH . M 5 HOH A 5 316 31 HOH HOH . M 5 HOH A 6 317 34 HOH HOH . M 5 HOH A 7 318 35 HOH HOH . M 5 HOH A 8 319 39 HOH HOH . M 5 HOH A 9 320 40 HOH HOH . M 5 HOH A 10 321 48 HOH HOH . M 5 HOH A 11 322 66 HOH HOH . M 5 HOH A 12 323 67 HOH HOH . M 5 HOH A 13 324 68 HOH HOH . M 5 HOH A 14 325 69 HOH HOH . N 5 HOH B 1 312 6 HOH HOH . N 5 HOH B 2 313 12 HOH HOH . N 5 HOH B 3 314 21 HOH HOH . N 5 HOH B 4 315 22 HOH HOH . N 5 HOH B 5 316 36 HOH HOH . N 5 HOH B 6 317 45 HOH HOH . N 5 HOH B 7 318 50 HOH HOH . N 5 HOH B 8 319 56 HOH HOH . N 5 HOH B 9 320 65 HOH HOH . N 5 HOH B 10 321 73 HOH HOH . O 5 HOH C 1 312 3 HOH HOH . O 5 HOH C 2 313 15 HOH HOH . O 5 HOH C 3 314 47 HOH HOH . O 5 HOH C 4 315 49 HOH HOH . O 5 HOH C 5 316 59 HOH HOH . O 5 HOH C 6 317 61 HOH HOH . O 5 HOH C 7 318 70 HOH HOH . O 5 HOH C 8 319 71 HOH HOH . O 5 HOH C 9 320 72 HOH HOH . P 5 HOH D 1 1109 41 HOH HOH . P 5 HOH D 2 1110 74 HOH HOH . P 5 HOH D 3 1111 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x 13.509 _atom_site.Cartn_y -61.855 _atom_site.Cartn_z -25.188 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1108 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #