data_2BFA
#
_model_server_result.job_id            TsgjNHi_bGcstQt0XUIsXA 
_model_server_result.datetime_utc      '2024-11-27 06:00:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bfa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1293}' 
#
_entry.id    2BFA 
#
_exptl.entry_id    2BFA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BFA 
_cell.length_a            94.538 
_cell.length_b            103.834 
_cell.length_c            137.045 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BFA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 L N N 
? 4 Q N N 
? 4 R N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 143 n n 
C1 C2 EDO sing 144 n n 
C1 H11 EDO sing 145 n n 
C1 H12 EDO sing 146 n n 
O1 HO1 EDO sing 147 n n 
C2 O2 EDO sing 148 n n 
C2 H21 EDO sing 149 n n 
C2 H22 EDO sing 150 n n 
O2 HO2 EDO sing 151 n n 
#
_atom_sites.entry_id                     2BFA 
_atom_sites.fract_transf_matrix[1][1]    0.010578 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009631 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007297 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NDP A 1 1289 1289 NDP NDP . 
F 3 CB3 A 1 1290 1290 CB3 CB3 . 
G 4 EDO A 1 1291 1291 EDO EDO . 
H 4 EDO A 1 1292 1292 EDO EDO . 
I 4 EDO A 1 1293 1293 EDO EDO . 
J 2 NDP B 1 1289 1289 NDP NDP . 
K 3 CB3 B 1 1290 1290 CB3 CB3 . 
L 4 EDO B 1 1291 1291 EDO EDO . 
M 2 NDP C 1 1289 1289 NDP NDP . 
N 3 CB3 C 1 1290 1290 CB3 CB3 . 
O 2 NDP D 1 1289 1289 NDP NDP . 
P 3 CB3 D 1 1290 1290 CB3 CB3 . 
Q 4 EDO D 1 1291 1291 EDO EDO . 
R 4 EDO D 1 1292 1292 EDO EDO . 
S 5 HOH A 1 2001 2001 HOH HOH . 
S 5 HOH A 2 2002 2002 HOH HOH . 
S 5 HOH A 3 2003 2003 HOH HOH . 
S 5 HOH A 4 2004 2004 HOH HOH . 
S 5 HOH A 5 2005 2005 HOH HOH . 
S 5 HOH A 6 2006 2006 HOH HOH . 
S 5 HOH A 7 2007 2007 HOH HOH . 
S 5 HOH A 8 2008 2008 HOH HOH . 
S 5 HOH A 9 2009 2009 HOH HOH . 
S 5 HOH A 10 2010 2010 HOH HOH . 
S 5 HOH A 11 2011 2011 HOH HOH . 
S 5 HOH A 12 2012 2012 HOH HOH . 
S 5 HOH A 13 2013 2013 HOH HOH . 
S 5 HOH A 14 2014 2014 HOH HOH . 
S 5 HOH A 15 2015 2015 HOH HOH . 
S 5 HOH A 16 2016 2016 HOH HOH . 
S 5 HOH A 17 2017 2017 HOH HOH . 
S 5 HOH A 18 2018 2018 HOH HOH . 
S 5 HOH A 19 2019 2019 HOH HOH . 
S 5 HOH A 20 2020 2020 HOH HOH . 
S 5 HOH A 21 2021 2021 HOH HOH . 
S 5 HOH A 22 2022 2022 HOH HOH . 
S 5 HOH A 23 2023 2023 HOH HOH . 
S 5 HOH A 24 2024 2024 HOH HOH . 
S 5 HOH A 25 2025 2025 HOH HOH . 
S 5 HOH A 26 2026 2026 HOH HOH . 
S 5 HOH A 27 2027 2027 HOH HOH . 
S 5 HOH A 28 2028 2028 HOH HOH . 
S 5 HOH A 29 2029 2029 HOH HOH . 
S 5 HOH A 30 2030 2030 HOH HOH . 
S 5 HOH A 31 2031 2031 HOH HOH . 
S 5 HOH A 32 2032 2032 HOH HOH . 
S 5 HOH A 33 2033 2033 HOH HOH . 
S 5 HOH A 34 2034 2034 HOH HOH . 
S 5 HOH A 35 2035 2035 HOH HOH . 
S 5 HOH A 36 2036 2036 HOH HOH . 
S 5 HOH A 37 2037 2037 HOH HOH . 
S 5 HOH A 38 2038 2038 HOH HOH . 
S 5 HOH A 39 2039 2039 HOH HOH . 
S 5 HOH A 40 2040 2040 HOH HOH . 
S 5 HOH A 41 2041 2041 HOH HOH . 
S 5 HOH A 42 2042 2042 HOH HOH . 
S 5 HOH A 43 2043 2043 HOH HOH . 
S 5 HOH A 44 2044 2044 HOH HOH . 
S 5 HOH A 45 2045 2045 HOH HOH . 
S 5 HOH A 46 2046 2046 HOH HOH . 
S 5 HOH A 47 2047 2047 HOH HOH . 
S 5 HOH A 48 2048 2048 HOH HOH . 
S 5 HOH A 49 2049 2049 HOH HOH . 
S 5 HOH A 50 2050 2050 HOH HOH . 
S 5 HOH A 51 2051 2051 HOH HOH . 
S 5 HOH A 52 2052 2052 HOH HOH . 
S 5 HOH A 53 2053 2053 HOH HOH . 
S 5 HOH A 54 2054 2054 HOH HOH . 
S 5 HOH A 55 2055 2055 HOH HOH . 
S 5 HOH A 56 2056 2056 HOH HOH . 
S 5 HOH A 57 2057 2057 HOH HOH . 
S 5 HOH A 58 2058 2058 HOH HOH . 
S 5 HOH A 59 2059 2059 HOH HOH . 
T 5 HOH B 1 2001 2001 HOH HOH . 
T 5 HOH B 2 2002 2002 HOH HOH . 
T 5 HOH B 3 2003 2003 HOH HOH . 
T 5 HOH B 4 2004 2004 HOH HOH . 
T 5 HOH B 5 2005 2005 HOH HOH . 
T 5 HOH B 6 2006 2006 HOH HOH . 
T 5 HOH B 7 2007 2007 HOH HOH . 
T 5 HOH B 8 2008 2008 HOH HOH . 
T 5 HOH B 9 2009 2009 HOH HOH . 
T 5 HOH B 10 2010 2010 HOH HOH . 
T 5 HOH B 11 2011 2011 HOH HOH . 
T 5 HOH B 12 2012 2012 HOH HOH . 
T 5 HOH B 13 2013 2013 HOH HOH . 
T 5 HOH B 14 2014 2014 HOH HOH . 
T 5 HOH B 15 2015 2015 HOH HOH . 
T 5 HOH B 16 2016 2016 HOH HOH . 
T 5 HOH B 17 2017 2017 HOH HOH . 
T 5 HOH B 18 2018 2018 HOH HOH . 
T 5 HOH B 19 2019 2019 HOH HOH . 
T 5 HOH B 20 2020 2020 HOH HOH . 
T 5 HOH B 21 2021 2021 HOH HOH . 
T 5 HOH B 22 2022 2022 HOH HOH . 
T 5 HOH B 23 2023 2023 HOH HOH . 
T 5 HOH B 24 2024 2024 HOH HOH . 
T 5 HOH B 25 2025 2025 HOH HOH . 
T 5 HOH B 26 2026 2026 HOH HOH . 
T 5 HOH B 27 2027 2027 HOH HOH . 
T 5 HOH B 28 2028 2028 HOH HOH . 
T 5 HOH B 29 2029 2029 HOH HOH . 
T 5 HOH B 30 2030 2030 HOH HOH . 
T 5 HOH B 31 2031 2031 HOH HOH . 
T 5 HOH B 32 2032 2032 HOH HOH . 
T 5 HOH B 33 2033 2033 HOH HOH . 
T 5 HOH B 34 2034 2034 HOH HOH . 
T 5 HOH B 35 2035 2035 HOH HOH . 
T 5 HOH B 36 2036 2036 HOH HOH . 
T 5 HOH B 37 2037 2037 HOH HOH . 
T 5 HOH B 38 2038 2038 HOH HOH . 
T 5 HOH B 39 2039 2039 HOH HOH . 
T 5 HOH B 40 2040 2040 HOH HOH . 
T 5 HOH B 41 2041 2041 HOH HOH . 
T 5 HOH B 42 2042 2042 HOH HOH . 
U 5 HOH C 1 2001 2001 HOH HOH . 
U 5 HOH C 2 2002 2002 HOH HOH . 
U 5 HOH C 3 2003 2003 HOH HOH . 
U 5 HOH C 4 2004 2004 HOH HOH . 
U 5 HOH C 5 2005 2005 HOH HOH . 
U 5 HOH C 6 2006 2006 HOH HOH . 
U 5 HOH C 7 2007 2007 HOH HOH . 
U 5 HOH C 8 2008 2008 HOH HOH . 
U 5 HOH C 9 2009 2009 HOH HOH . 
U 5 HOH C 10 2010 2010 HOH HOH . 
U 5 HOH C 11 2011 2011 HOH HOH . 
U 5 HOH C 12 2012 2012 HOH HOH . 
U 5 HOH C 13 2013 2013 HOH HOH . 
U 5 HOH C 14 2014 2014 HOH HOH . 
U 5 HOH C 15 2015 2015 HOH HOH . 
U 5 HOH C 16 2016 2016 HOH HOH . 
U 5 HOH C 17 2017 2017 HOH HOH . 
U 5 HOH C 18 2018 2018 HOH HOH . 
U 5 HOH C 19 2019 2019 HOH HOH . 
U 5 HOH C 20 2020 2020 HOH HOH . 
U 5 HOH C 21 2021 2021 HOH HOH . 
U 5 HOH C 22 2022 2022 HOH HOH . 
U 5 HOH C 23 2023 2023 HOH HOH . 
U 5 HOH C 24 2024 2024 HOH HOH . 
U 5 HOH C 25 2025 2025 HOH HOH . 
U 5 HOH C 26 2026 2026 HOH HOH . 
U 5 HOH C 27 2027 2027 HOH HOH . 
U 5 HOH C 28 2028 2028 HOH HOH . 
U 5 HOH C 29 2029 2029 HOH HOH . 
U 5 HOH C 30 2030 2030 HOH HOH . 
U 5 HOH C 31 2031 2031 HOH HOH . 
U 5 HOH C 32 2032 2032 HOH HOH . 
U 5 HOH C 33 2033 2033 HOH HOH . 
U 5 HOH C 34 2034 2034 HOH HOH . 
U 5 HOH C 35 2035 2035 HOH HOH . 
U 5 HOH C 36 2036 2036 HOH HOH . 
U 5 HOH C 37 2037 2037 HOH HOH . 
U 5 HOH C 38 2038 2038 HOH HOH . 
U 5 HOH C 39 2039 2039 HOH HOH . 
U 5 HOH C 40 2040 2040 HOH HOH . 
U 5 HOH C 41 2041 2041 HOH HOH . 
U 5 HOH C 42 2042 2042 HOH HOH . 
U 5 HOH C 43 2043 2043 HOH HOH . 
U 5 HOH C 44 2044 2044 HOH HOH . 
U 5 HOH C 45 2045 2045 HOH HOH . 
U 5 HOH C 46 2046 2046 HOH HOH . 
U 5 HOH C 47 2047 2047 HOH HOH . 
U 5 HOH C 48 2048 2048 HOH HOH . 
U 5 HOH C 49 2049 2049 HOH HOH . 
U 5 HOH C 50 2050 2050 HOH HOH . 
U 5 HOH C 51 2051 2051 HOH HOH . 
U 5 HOH C 52 2052 2052 HOH HOH . 
U 5 HOH C 53 2053 2053 HOH HOH . 
U 5 HOH C 54 2054 2054 HOH HOH . 
U 5 HOH C 55 2055 2055 HOH HOH . 
U 5 HOH C 56 2056 2056 HOH HOH . 
U 5 HOH C 57 2057 2057 HOH HOH . 
U 5 HOH C 58 2058 2058 HOH HOH . 
U 5 HOH C 59 2059 2059 HOH HOH . 
U 5 HOH C 60 2060 2060 HOH HOH . 
U 5 HOH C 61 2061 2061 HOH HOH . 
U 5 HOH C 62 2062 2062 HOH HOH . 
U 5 HOH C 63 2063 2063 HOH HOH . 
V 5 HOH D 1 2001 2001 HOH HOH . 
V 5 HOH D 2 2002 2002 HOH HOH . 
V 5 HOH D 3 2003 2003 HOH HOH . 
V 5 HOH D 4 2004 2004 HOH HOH . 
V 5 HOH D 5 2005 2005 HOH HOH . 
V 5 HOH D 6 2006 2006 HOH HOH . 
V 5 HOH D 7 2007 2007 HOH HOH . 
V 5 HOH D 8 2008 2008 HOH HOH . 
V 5 HOH D 9 2009 2009 HOH HOH . 
V 5 HOH D 10 2010 2010 HOH HOH . 
V 5 HOH D 11 2011 2011 HOH HOH . 
V 5 HOH D 12 2012 2012 HOH HOH . 
V 5 HOH D 13 2013 2013 HOH HOH . 
V 5 HOH D 14 2014 2014 HOH HOH . 
V 5 HOH D 15 2015 2015 HOH HOH . 
V 5 HOH D 16 2016 2016 HOH HOH . 
V 5 HOH D 17 2017 2017 HOH HOH . 
V 5 HOH D 18 2018 2018 HOH HOH . 
V 5 HOH D 19 2019 2019 HOH HOH . 
V 5 HOH D 20 2020 2020 HOH HOH . 
V 5 HOH D 21 2021 2021 HOH HOH . 
V 5 HOH D 22 2022 2022 HOH HOH . 
V 5 HOH D 23 2023 2023 HOH HOH . 
V 5 HOH D 24 2024 2024 HOH HOH . 
V 5 HOH D 25 2025 2025 HOH HOH . 
V 5 HOH D 26 2026 2026 HOH HOH . 
V 5 HOH D 27 2027 2027 HOH HOH . 
V 5 HOH D 28 2028 2028 HOH HOH . 
V 5 HOH D 29 2029 2029 HOH HOH . 
V 5 HOH D 30 2030 2030 HOH HOH . 
V 5 HOH D 31 2031 2031 HOH HOH . 
V 5 HOH D 32 2032 2032 HOH HOH . 
V 5 HOH D 33 2033 2033 HOH HOH . 
V 5 HOH D 34 2034 2034 HOH HOH . 
V 5 HOH D 35 2035 2035 HOH HOH . 
V 5 HOH D 36 2036 2036 HOH HOH . 
V 5 HOH D 37 2037 2037 HOH HOH . 
V 5 HOH D 38 2038 2038 HOH HOH . 
V 5 HOH D 39 2039 2039 HOH HOH . 
V 5 HOH D 40 2040 2040 HOH HOH . 
V 5 HOH D 41 2041 2041 HOH HOH . 
V 5 HOH D 42 2042 2042 HOH HOH . 
V 5 HOH D 43 2043 2043 HOH HOH . 
V 5 HOH D 44 2044 2044 HOH HOH . 
V 5 HOH D 45 2045 2045 HOH HOH . 
V 5 HOH D 46 2046 2046 HOH HOH . 
V 5 HOH D 47 2047 2047 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 4 6.445 36.252 71.61 1 51.18 ? C1 EDO 1293 A 1 
HETATM 2 O O1 EDO . . . I 4 6.853 36.844 72.822 1 50.81 ? O1 EDO 1293 A 1 
HETATM 3 C C2 EDO . . . I 4 7.616 35.55 70.97 1 51.17 ? C2 EDO 1293 A 1 
HETATM 4 O O2 EDO . . . I 4 7.191 34.952 69.771 1 51.39 ? O2 EDO 1293 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#