data_2BFP # _model_server_result.job_id 79ibztGXoi_hMlaq3XjNYg _model_server_result.datetime_utc '2024-11-27 09:07:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1290}' # _entry.id 2BFP # _exptl.entry_id 2BFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BFP _cell.length_a 94.103 _cell.length_b 103.566 _cell.length_c 137.434 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 M N N ? 3 P N N # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 138 n y N1 C8A H4B sing 139 n y C2 N2 H4B sing 140 n n C2 N3 H4B sing 141 n y N2 HN21 H4B sing 142 n n N2 HN22 H4B sing 143 n n N3 C4 H4B sing 144 n y N3 HN3 H4B sing 145 n n C4 O4 H4B doub 146 n n C4 C4A H4B sing 147 n y C4A C8A H4B doub 148 n y C4A N5 H4B sing 149 n n C8A N8 H4B sing 150 n n N5 C6 H4B sing 151 n n N5 HN5 H4B sing 152 n n N8 C7 H4B sing 153 n n N8 HN8 H4B sing 154 n n C6 C7 H4B sing 155 n n C6 C9 H4B sing 156 n n C6 H6 H4B sing 157 n n C7 H71 H4B sing 158 n n C7 H72 H4B sing 159 n n C9 O9 H4B sing 160 n n C9 C10 H4B sing 161 n n C9 H9 H4B sing 162 n n O9 HO9 H4B sing 163 n n C10 C11 H4B sing 164 n n C10 O10 H4B sing 165 n n C10 H10 H4B sing 166 n n C11 H111 H4B sing 167 n n C11 H112 H4B sing 168 n n C11 H113 H4B sing 169 n n O10 HO0 H4B sing 170 n n # _atom_sites.entry_id 2BFP _atom_sites.fract_transf_matrix[1][1] 0.010627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 1289 1289 NAP NAP . F 3 H4B A 1 1290 1290 H4B H4B . G 2 NAP B 1 1289 1289 NAP NAP . H 3 H4B B 1 1290 1290 H4B H4B . I 4 EDO B 1 1291 1291 EDO EDO . J 4 EDO B 1 1292 1292 EDO EDO . K 4 EDO B 1 1293 1293 EDO EDO . L 2 NAP C 1 1289 1289 NAP NAP . M 3 H4B C 1 1290 1290 H4B H4B . N 4 EDO C 1 1291 1291 EDO EDO . O 2 NAP D 1 1289 1289 NAP NAP . P 3 H4B D 1 1290 1290 H4B H4B . Q 4 EDO D 1 1291 1291 EDO EDO . R 4 EDO D 1 1292 1292 EDO EDO . S 5 HOH A 1 2001 2001 HOH HOH . S 5 HOH A 2 2002 2002 HOH HOH . S 5 HOH A 3 2003 2003 HOH HOH . S 5 HOH A 4 2004 2004 HOH HOH . S 5 HOH A 5 2005 2005 HOH HOH . S 5 HOH A 6 2006 2006 HOH HOH . S 5 HOH A 7 2007 2007 HOH HOH . S 5 HOH A 8 2008 2008 HOH HOH . S 5 HOH A 9 2009 2009 HOH HOH . S 5 HOH A 10 2010 2010 HOH HOH . S 5 HOH A 11 2011 2011 HOH HOH . S 5 HOH A 12 2012 2012 HOH HOH . S 5 HOH A 13 2013 2013 HOH HOH . S 5 HOH A 14 2014 2014 HOH HOH . S 5 HOH A 15 2015 2015 HOH HOH . S 5 HOH A 16 2016 2016 HOH HOH . S 5 HOH A 17 2017 2017 HOH HOH . S 5 HOH A 18 2018 2018 HOH HOH . S 5 HOH A 19 2019 2019 HOH HOH . S 5 HOH A 20 2020 2020 HOH HOH . S 5 HOH A 21 2021 2021 HOH HOH . S 5 HOH A 22 2022 2022 HOH HOH . S 5 HOH A 23 2023 2023 HOH HOH . S 5 HOH A 24 2024 2024 HOH HOH . S 5 HOH A 25 2025 2025 HOH HOH . S 5 HOH A 26 2026 2026 HOH HOH . S 5 HOH A 27 2027 2027 HOH HOH . S 5 HOH A 28 2028 2028 HOH HOH . S 5 HOH A 29 2029 2029 HOH HOH . S 5 HOH A 30 2030 2030 HOH HOH . S 5 HOH A 31 2031 2031 HOH HOH . S 5 HOH A 32 2032 2032 HOH HOH . S 5 HOH A 33 2033 2033 HOH HOH . S 5 HOH A 34 2034 2034 HOH HOH . S 5 HOH A 35 2035 2035 HOH HOH . S 5 HOH A 36 2036 2036 HOH HOH . S 5 HOH A 37 2037 2037 HOH HOH . S 5 HOH A 38 2038 2038 HOH HOH . S 5 HOH A 39 2039 2039 HOH HOH . S 5 HOH A 40 2040 2040 HOH HOH . S 5 HOH A 41 2041 2041 HOH HOH . S 5 HOH A 42 2042 2042 HOH HOH . S 5 HOH A 43 2043 2043 HOH HOH . S 5 HOH A 44 2044 2044 HOH HOH . T 5 HOH B 1 2001 2001 HOH HOH . T 5 HOH B 2 2002 2002 HOH HOH . T 5 HOH B 3 2003 2003 HOH HOH . T 5 HOH B 4 2004 2004 HOH HOH . T 5 HOH B 5 2005 2005 HOH HOH . T 5 HOH B 6 2006 2006 HOH HOH . T 5 HOH B 7 2007 2007 HOH HOH . T 5 HOH B 8 2008 2008 HOH HOH . T 5 HOH B 9 2009 2009 HOH HOH . T 5 HOH B 10 2010 2010 HOH HOH . T 5 HOH B 11 2011 2011 HOH HOH . T 5 HOH B 12 2012 2012 HOH HOH . T 5 HOH B 13 2013 2013 HOH HOH . T 5 HOH B 14 2014 2014 HOH HOH . T 5 HOH B 15 2015 2015 HOH HOH . T 5 HOH B 16 2016 2016 HOH HOH . T 5 HOH B 17 2017 2017 HOH HOH . T 5 HOH B 18 2018 2018 HOH HOH . T 5 HOH B 19 2019 2019 HOH HOH . T 5 HOH B 20 2020 2020 HOH HOH . T 5 HOH B 21 2021 2021 HOH HOH . T 5 HOH B 22 2022 2022 HOH HOH . T 5 HOH B 23 2023 2023 HOH HOH . T 5 HOH B 24 2024 2024 HOH HOH . T 5 HOH B 25 2025 2025 HOH HOH . T 5 HOH B 26 2026 2026 HOH HOH . T 5 HOH B 27 2027 2027 HOH HOH . T 5 HOH B 28 2028 2028 HOH HOH . T 5 HOH B 29 2029 2029 HOH HOH . T 5 HOH B 30 2030 2030 HOH HOH . T 5 HOH B 31 2031 2031 HOH HOH . T 5 HOH B 32 2032 2032 HOH HOH . T 5 HOH B 33 2033 2033 HOH HOH . T 5 HOH B 34 2034 2034 HOH HOH . T 5 HOH B 35 2035 2035 HOH HOH . U 5 HOH C 1 2001 2001 HOH HOH . U 5 HOH C 2 2002 2002 HOH HOH . U 5 HOH C 3 2003 2003 HOH HOH . U 5 HOH C 4 2004 2004 HOH HOH . U 5 HOH C 5 2005 2005 HOH HOH . U 5 HOH C 6 2006 2006 HOH HOH . U 5 HOH C 7 2007 2007 HOH HOH . U 5 HOH C 8 2008 2008 HOH HOH . U 5 HOH C 9 2009 2009 HOH HOH . U 5 HOH C 10 2010 2010 HOH HOH . U 5 HOH C 11 2011 2011 HOH HOH . U 5 HOH C 12 2012 2012 HOH HOH . U 5 HOH C 13 2013 2013 HOH HOH . U 5 HOH C 14 2014 2014 HOH HOH . U 5 HOH C 15 2015 2015 HOH HOH . U 5 HOH C 16 2016 2016 HOH HOH . U 5 HOH C 17 2017 2017 HOH HOH . U 5 HOH C 18 2018 2018 HOH HOH . U 5 HOH C 19 2019 2019 HOH HOH . U 5 HOH C 20 2020 2020 HOH HOH . U 5 HOH C 21 2021 2021 HOH HOH . U 5 HOH C 22 2022 2022 HOH HOH . U 5 HOH C 23 2023 2023 HOH HOH . U 5 HOH C 24 2024 2024 HOH HOH . U 5 HOH C 25 2025 2025 HOH HOH . U 5 HOH C 26 2026 2026 HOH HOH . U 5 HOH C 27 2027 2027 HOH HOH . U 5 HOH C 28 2028 2028 HOH HOH . U 5 HOH C 29 2029 2029 HOH HOH . U 5 HOH C 30 2030 2030 HOH HOH . U 5 HOH C 31 2031 2031 HOH HOH . U 5 HOH C 32 2032 2032 HOH HOH . U 5 HOH C 33 2033 2033 HOH HOH . U 5 HOH C 34 2034 2034 HOH HOH . U 5 HOH C 35 2035 2035 HOH HOH . U 5 HOH C 36 2036 2036 HOH HOH . U 5 HOH C 37 2037 2037 HOH HOH . U 5 HOH C 38 2038 2038 HOH HOH . U 5 HOH C 39 2039 2039 HOH HOH . U 5 HOH C 40 2040 2040 HOH HOH . U 5 HOH C 41 2041 2041 HOH HOH . U 5 HOH C 42 2042 2042 HOH HOH . V 5 HOH D 1 2001 2001 HOH HOH . V 5 HOH D 2 2002 2002 HOH HOH . V 5 HOH D 3 2003 2003 HOH HOH . V 5 HOH D 4 2004 2004 HOH HOH . V 5 HOH D 5 2005 2005 HOH HOH . V 5 HOH D 6 2006 2006 HOH HOH . V 5 HOH D 7 2007 2007 HOH HOH . V 5 HOH D 8 2008 2008 HOH HOH . V 5 HOH D 9 2009 2009 HOH HOH . V 5 HOH D 10 2010 2010 HOH HOH . V 5 HOH D 11 2011 2011 HOH HOH . V 5 HOH D 12 2012 2012 HOH HOH . V 5 HOH D 13 2013 2013 HOH HOH . V 5 HOH D 14 2014 2014 HOH HOH . V 5 HOH D 15 2015 2015 HOH HOH . V 5 HOH D 16 2016 2016 HOH HOH . V 5 HOH D 17 2017 2017 HOH HOH . V 5 HOH D 18 2018 2018 HOH HOH . V 5 HOH D 19 2019 2019 HOH HOH . V 5 HOH D 20 2020 2020 HOH HOH . V 5 HOH D 21 2021 2021 HOH HOH . V 5 HOH D 22 2022 2022 HOH HOH . V 5 HOH D 23 2023 2023 HOH HOH . V 5 HOH D 24 2024 2024 HOH HOH . V 5 HOH D 25 2025 2025 HOH HOH . V 5 HOH D 26 2026 2026 HOH HOH . V 5 HOH D 27 2027 2027 HOH HOH . V 5 HOH D 28 2028 2028 HOH HOH . V 5 HOH D 29 2029 2029 HOH HOH . V 5 HOH D 30 2030 2030 HOH HOH . V 5 HOH D 31 2031 2031 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . M 3 19.383 61.403 57.003 1 48.54 ? N1 H4B 1290 C 1 HETATM 2 C C2 H4B . . . M 3 19.357 62.486 56.183 1 49.25 ? C2 H4B 1290 C 1 HETATM 3 N N2 H4B . . . M 3 18.525 63.499 56.383 1 46.45 ? N2 H4B 1290 C 1 HETATM 4 N N3 H4B . . . M 3 20.215 62.506 55.144 1 46.67 ? N3 H4B 1290 C 1 HETATM 5 C C4 H4B . . . M 3 21.133 61.48 54.862 1 50.1 ? C4 H4B 1290 C 1 HETATM 6 O O4 H4B . . . M 3 21.92 61.558 53.909 1 49.21 ? O4 H4B 1290 C 1 HETATM 7 C C4A H4B . . . M 3 21.083 60.394 55.748 1 50.54 ? C4A H4B 1290 C 1 HETATM 8 C C8A H4B . . . M 3 20.228 60.343 56.813 1 49 ? C8A H4B 1290 C 1 HETATM 9 N N5 H4B . . . M 3 22.096 59.387 55.52 1 51.98 ? N5 H4B 1290 C 1 HETATM 10 N N8 H4B . . . M 3 20.305 59.396 57.74 1 50.57 ? N8 H4B 1290 C 1 HETATM 11 C C6 H4B . . . M 3 21.982 58.169 56.405 1 53.37 ? C6 H4B 1290 C 1 HETATM 12 C C7 H4B . . . M 3 21.491 58.537 57.788 1 51.25 ? C7 H4B 1290 C 1 HETATM 13 C C9 H4B . . . M 3 23.284 57.367 56.263 1 59.02 ? C9 H4B 1290 C 1 HETATM 14 O O9 H4B . . . M 3 23.596 57.095 54.896 1 60.4 ? O9 H4B 1290 C 1 HETATM 15 C C10 H4B . . . M 3 24.489 58.012 56.969 1 63.09 ? C10 H4B 1290 C 1 HETATM 16 C C11 H4B . . . M 3 25.661 58.323 56.104 1 64.75 ? C11 H4B 1290 C 1 HETATM 17 O O10 H4B . . . M 3 24.835 57.068 57.982 1 66.23 ? O10 H4B 1290 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #