data_2BGM # _model_server_result.job_id 2szSJEBSq3donHBsjRi8iA _model_server_result.datetime_utc '2024-10-19 11:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":6001}' # _entry.id 2BGM # _exptl.entry_id 2BGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.385 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description MATAIRESINOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BGM _cell.length_a 57.35 _cell.length_b 118.74 _cell.length_c 131.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x,-y+1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 59.37 65.625 3 'crystal symmetry operation' 11_555 -x+1/2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 28.675 0 65.625 4 'crystal symmetry operation' 14_555 -x+1/2,-y+1/2,z -1 0 0 0 -1 0 0 0 1 28.675 59.37 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H22 O6' _chem_comp.formula_weight 358.385 _chem_comp.id MAX _chem_comp.mon_nstd_flag . _chem_comp.name MATAIRESINOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ARTIGENIN CONGENER;DIBENZYLBUTYROLACTONE LIGNANOLIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MAX doub 218 n y C1 C6 MAX sing 219 n y C1 H1 MAX sing 220 n n C2 C3 MAX sing 221 n y C2 O25 MAX sing 222 n n C3 C4 MAX doub 223 n y C3 O24 MAX sing 224 n n C4 C5 MAX sing 225 n y C4 H4 MAX sing 226 n n C5 C6 MAX doub 227 n y C5 H5 MAX sing 228 n n C6 C7 MAX sing 229 n n C7 C8 MAX sing 230 n n C7 H7C1 MAX sing 231 n n C7 H7C2 MAX sing 232 n n C8 C9 MAX sing 233 n n C8 C12 MAX sing 234 n n C8 H8 MAX sing 235 n n C9 O10 MAX sing 236 n n C9 H9C1 MAX sing 237 n n C9 H9C2 MAX sing 238 n n O10 C11 MAX sing 239 n n C11 C12 MAX sing 240 n n C11 O13 MAX doub 241 n n C12 C14 MAX sing 242 n n C12 H12 MAX sing 243 n n C14 C15 MAX sing 244 n n C14 H141 MAX sing 245 n n C14 H142 MAX sing 246 n n C15 C16 MAX doub 247 n y C15 C20 MAX sing 248 n y C16 C17 MAX sing 249 n y C16 H16 MAX sing 250 n n C17 C18 MAX doub 251 n y C17 H17 MAX sing 252 n n C18 C19 MAX sing 253 n y C18 O23 MAX sing 254 n n C19 C20 MAX doub 255 n y C19 O21 MAX sing 256 n n C20 H20 MAX sing 257 n n O21 C22 MAX sing 258 n n C22 H221 MAX sing 259 n n C22 H222 MAX sing 260 n n C22 H223 MAX sing 261 n n O23 H23 MAX sing 262 n n O24 H24 MAX sing 263 n n O25 C26 MAX sing 264 n n C26 H261 MAX sing 265 n n C26 H262 MAX sing 266 n n C26 H263 MAX sing 267 n n # _atom_sites.entry_id 2BGM _atom_sites.fract_transf_matrix[1][1] 0.017437 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAJ A 1 1300 1300 NAJ NAJ . C 3 MAX A 1 6001 6001 MAX MAX . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . D 4 HOH A 105 2105 2105 HOH HOH . D 4 HOH A 106 2106 2106 HOH HOH . D 4 HOH A 107 2107 2107 HOH HOH . D 4 HOH A 108 2108 2108 HOH HOH . D 4 HOH A 109 2109 2109 HOH HOH . D 4 HOH A 110 2110 2110 HOH HOH . D 4 HOH A 111 2111 2111 HOH HOH . D 4 HOH A 112 2112 2112 HOH HOH . D 4 HOH A 113 2113 2113 HOH HOH . D 4 HOH A 114 2114 2114 HOH HOH . D 4 HOH A 115 2115 2115 HOH HOH . D 4 HOH A 116 2116 2116 HOH HOH . D 4 HOH A 117 2117 2117 HOH HOH . D 4 HOH A 118 2118 2118 HOH HOH . D 4 HOH A 119 2119 2119 HOH HOH . D 4 HOH A 120 2120 2120 HOH HOH . D 4 HOH A 121 2121 2121 HOH HOH . D 4 HOH A 122 2122 2122 HOH HOH . D 4 HOH A 123 2123 2123 HOH HOH . D 4 HOH A 124 2124 2124 HOH HOH . D 4 HOH A 125 2125 2125 HOH HOH . D 4 HOH A 126 2126 2126 HOH HOH . D 4 HOH A 127 2127 2127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MAX . . . C 3 -1.189 19.606 25.835 1 77.49 ? C1 MAX 6001 A 1 HETATM 2 C C2 MAX . . . C 3 -0.115 20.425 25.819 1 77.16 ? C2 MAX 6001 A 1 HETATM 3 C C3 MAX . . . C 3 0.728 20.366 24.76 1 77.72 ? C3 MAX 6001 A 1 HETATM 4 C C4 MAX . . . C 3 0.465 19.515 23.754 1 79.49 ? C4 MAX 6001 A 1 HETATM 5 C C5 MAX . . . C 3 -0.608 18.707 23.781 1 77.83 ? C5 MAX 6001 A 1 HETATM 6 C C6 MAX . . . C 3 -1.446 18.741 24.832 1 75.77 ? C6 MAX 6001 A 1 HETATM 7 C C7 MAX . . . C 3 -2.606 17.774 24.92 1 74.74 ? C7 MAX 6001 A 1 HETATM 8 C C8 MAX . . . C 3 -2.171 16.326 25.273 1 71.13 ? C8 MAX 6001 A 1 HETATM 9 C C9 MAX . . . C 3 -1.389 15.391 24.338 1 72.26 ? C9 MAX 6001 A 1 HETATM 10 O O10 MAX . . . C 3 -0.011 15.455 24.79 1 71.37 ? O10 MAX 6001 A 1 HETATM 11 C C11 MAX . . . C 3 0.048 15.913 26.073 1 69.37 ? C11 MAX 6001 A 1 HETATM 12 C C12 MAX . . . C 3 -1.331 16.262 26.562 1 65.23 ? C12 MAX 6001 A 1 HETATM 13 O O13 MAX . . . C 3 1.045 15.807 26.755 1 69.1 ? O13 MAX 6001 A 1 HETATM 14 C C14 MAX . . . C 3 -2.302 15.688 27.643 1 51.57 ? C14 MAX 6001 A 1 HETATM 15 C C15 MAX . . . C 3 -2.118 14.217 27.946 1 50.36 ? C15 MAX 6001 A 1 HETATM 16 C C16 MAX . . . C 3 -3.159 13.366 27.895 1 50.86 ? C16 MAX 6001 A 1 HETATM 17 C C17 MAX . . . C 3 -2.977 12.07 28.196 1 52.72 ? C17 MAX 6001 A 1 HETATM 18 C C18 MAX . . . C 3 -1.766 11.598 28.55 1 48.73 ? C18 MAX 6001 A 1 HETATM 19 C C19 MAX . . . C 3 -0.709 12.439 28.606 1 42.54 ? C19 MAX 6001 A 1 HETATM 20 C C20 MAX . . . C 3 -0.907 13.738 28.297 1 42.81 ? C20 MAX 6001 A 1 HETATM 21 O O21 MAX . . . C 3 0.355 12.078 29.391 1 17.45 ? O21 MAX 6001 A 1 HETATM 22 C C22 MAX . . . C 3 1.529 11.538 28.815 1 11.73 ? C22 MAX 6001 A 1 HETATM 23 O O23 MAX . . . C 3 -1.564 10.25 28.493 1 48.6 ? O23 MAX 6001 A 1 HETATM 24 O O24 MAX . . . C 3 2.064 20.597 24.913 1 78.55 ? O24 MAX 6001 A 1 HETATM 25 O O25 MAX . . . C 3 -0.055 21.528 26.636 1 74.46 ? O25 MAX 6001 A 1 HETATM 26 C C26 MAX . . . C 3 -0.949 22.62 26.495 1 71.54 ? C26 MAX 6001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #