data_2BHL # _model_server_result.job_id OfOcTMzedqKnlQk9XzqMeg _model_server_result.datetime_utc '2024-12-02 16:54:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bhl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1510}' # _entry.id 2BHL # _exptl.entry_id 2BHL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BHL _cell.length_a 117.552 _cell.length_b 179.527 _cell.length_c 137.938 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BHL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 179.527 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 J N N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id BG6 _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-D-GLUCOSE-6-PHOSPHATE;6-O-phosphono-beta-D-glucose;6-O-phosphono-D-glucose;6-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BG6 sing 70 n n C1 O1 BG6 sing 71 n n C1 O5 BG6 sing 72 n n C1 H1 BG6 sing 73 n n C2 C3 BG6 sing 74 n n C2 O2 BG6 sing 75 n n C2 H2 BG6 sing 76 n n O1 HO1 BG6 sing 77 n n O5 C5 BG6 sing 78 n n C3 C4 BG6 sing 79 n n C3 O3 BG6 sing 80 n n C3 H3 BG6 sing 81 n n O2 HO2 BG6 sing 82 n n C4 C5 BG6 sing 83 n n C4 O4 BG6 sing 84 n n C4 H4 BG6 sing 85 n n O3 HO3 BG6 sing 86 n n C5 C6 BG6 sing 87 n n C5 H5 BG6 sing 88 n n O4 HO4 BG6 sing 89 n n C6 O6 BG6 sing 90 n n C6 H61 BG6 sing 91 n n C6 H62 BG6 sing 92 n n O6 P BG6 sing 93 n n P O1P BG6 sing 94 n n P O2P BG6 sing 95 n n P O3P BG6 doub 96 n n O1P H1O1 BG6 sing 97 n n O2P H2O2 BG6 sing 98 n n # _pdbx_chem_comp_identifier.comp_id BG6 _pdbx_chem_comp_identifier.identifier b-D-Glcp6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2BHL _atom_sites.fract_transf_matrix[1][1] 0.008507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00557 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 1506 1506 GOL GOL . D 2 GOL A 1 1507 1507 GOL GOL . E 2 GOL A 1 1508 1508 GOL GOL . F 2 GOL A 1 1509 1509 GOL GOL . G 3 BG6 A 1 1510 1510 BG6 BG6 . H 2 GOL B 1 1506 1506 GOL GOL . I 2 GOL B 1 1507 1507 GOL GOL . J 3 BG6 B 1 1508 1508 BG6 BG6 . K 4 HOH A 1 2001 2001 HOH HOH . K 4 HOH A 2 2002 2002 HOH HOH . K 4 HOH A 3 2003 2003 HOH HOH . K 4 HOH A 4 2004 2004 HOH HOH . K 4 HOH A 5 2005 2005 HOH HOH . K 4 HOH A 6 2006 2006 HOH HOH . K 4 HOH A 7 2007 2007 HOH HOH . K 4 HOH A 8 2008 2008 HOH HOH . K 4 HOH A 9 2009 2009 HOH HOH . K 4 HOH A 10 2010 2010 HOH HOH . K 4 HOH A 11 2011 2011 HOH HOH . K 4 HOH A 12 2012 2012 HOH HOH . K 4 HOH A 13 2013 2013 HOH HOH . K 4 HOH A 14 2014 2014 HOH HOH . K 4 HOH A 15 2015 2015 HOH HOH . K 4 HOH A 16 2016 2016 HOH HOH . K 4 HOH A 17 2017 2017 HOH HOH . K 4 HOH A 18 2018 2018 HOH HOH . K 4 HOH A 19 2019 2019 HOH HOH . K 4 HOH A 20 2020 2020 HOH HOH . K 4 HOH A 21 2021 2021 HOH HOH . K 4 HOH A 22 2022 2022 HOH HOH . K 4 HOH A 23 2023 2023 HOH HOH . K 4 HOH A 24 2024 2024 HOH HOH . K 4 HOH A 25 2025 2025 HOH HOH . K 4 HOH A 26 2026 2026 HOH HOH . K 4 HOH A 27 2027 2027 HOH HOH . K 4 HOH A 28 2028 2028 HOH HOH . K 4 HOH A 29 2029 2029 HOH HOH . K 4 HOH A 30 2030 2030 HOH HOH . K 4 HOH A 31 2031 2031 HOH HOH . K 4 HOH A 32 2032 2032 HOH HOH . K 4 HOH A 33 2033 2033 HOH HOH . K 4 HOH A 34 2034 2034 HOH HOH . K 4 HOH A 35 2035 2035 HOH HOH . K 4 HOH A 36 2036 2036 HOH HOH . K 4 HOH A 37 2037 2037 HOH HOH . K 4 HOH A 38 2038 2038 HOH HOH . K 4 HOH A 39 2039 2039 HOH HOH . K 4 HOH A 40 2040 2040 HOH HOH . K 4 HOH A 41 2041 2041 HOH HOH . K 4 HOH A 42 2042 2042 HOH HOH . K 4 HOH A 43 2043 2043 HOH HOH . L 4 HOH B 1 2001 2001 HOH HOH . L 4 HOH B 2 2002 2002 HOH HOH . L 4 HOH B 3 2003 2003 HOH HOH . L 4 HOH B 4 2004 2004 HOH HOH . L 4 HOH B 5 2005 2005 HOH HOH . L 4 HOH B 6 2006 2006 HOH HOH . L 4 HOH B 7 2007 2007 HOH HOH . L 4 HOH B 8 2008 2008 HOH HOH . L 4 HOH B 9 2009 2009 HOH HOH . L 4 HOH B 10 2010 2010 HOH HOH . L 4 HOH B 11 2011 2011 HOH HOH . L 4 HOH B 12 2012 2012 HOH HOH . L 4 HOH B 13 2013 2013 HOH HOH . L 4 HOH B 14 2014 2014 HOH HOH . L 4 HOH B 15 2015 2015 HOH HOH . L 4 HOH B 16 2016 2016 HOH HOH . L 4 HOH B 17 2017 2017 HOH HOH . L 4 HOH B 18 2018 2018 HOH HOH . L 4 HOH B 19 2019 2019 HOH HOH . L 4 HOH B 20 2020 2020 HOH HOH . L 4 HOH B 21 2021 2021 HOH HOH . L 4 HOH B 22 2022 2022 HOH HOH . L 4 HOH B 23 2023 2023 HOH HOH . L 4 HOH B 24 2024 2024 HOH HOH . L 4 HOH B 25 2025 2025 HOH HOH . L 4 HOH B 26 2026 2026 HOH HOH . L 4 HOH B 27 2027 2027 HOH HOH . L 4 HOH B 28 2028 2028 HOH HOH . L 4 HOH B 29 2029 2029 HOH HOH . L 4 HOH B 30 2030 2030 HOH HOH . L 4 HOH B 31 2031 2031 HOH HOH . L 4 HOH B 32 2032 2032 HOH HOH . L 4 HOH B 33 2033 2033 HOH HOH . L 4 HOH B 34 2034 2034 HOH HOH . L 4 HOH B 35 2035 2035 HOH HOH . L 4 HOH B 36 2036 2036 HOH HOH . L 4 HOH B 37 2037 2037 HOH HOH . L 4 HOH B 38 2038 2038 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BG6 . . . G 3 0.905 125.512 9.078 1 46.37 ? C1 BG6 1510 A 1 HETATM 2 C C2 BG6 . . . G 3 -0.583 125.284 8.923 1 46.61 ? C2 BG6 1510 A 1 HETATM 3 O O1 BG6 . . . G 3 1.548 125.289 7.869 1 45.62 ? O1 BG6 1510 A 1 HETATM 4 O O5 BG6 . . . G 3 1.458 124.651 10.076 1 46.54 ? O5 BG6 1510 A 1 HETATM 5 C C3 BG6 . . . G 3 -1.272 125.509 10.264 1 46.98 ? C3 BG6 1510 A 1 HETATM 6 O O2 BG6 . . . G 3 -1.093 126.173 7.943 1 46.22 ? O2 BG6 1510 A 1 HETATM 7 C C4 BG6 . . . G 3 -0.667 124.54 11.273 1 46.68 ? C4 BG6 1510 A 1 HETATM 8 O O3 BG6 . . . G 3 -2.684 125.292 10.136 1 47.47 ? O3 BG6 1510 A 1 HETATM 9 C C5 BG6 . . . G 3 0.825 124.832 11.361 1 46.89 ? C5 BG6 1510 A 1 HETATM 10 O O4 BG6 . . . G 3 -1.274 124.724 12.538 1 46.68 ? O4 BG6 1510 A 1 HETATM 11 C C6 BG6 . . . G 3 1.531 123.907 12.322 1 47.72 ? C6 BG6 1510 A 1 HETATM 12 O O6 BG6 . . . G 3 2.954 124.018 12.188 1 47.95 ? O6 BG6 1510 A 1 HETATM 13 P P BG6 . . . G 3 3.839 123.553 13.448 1 47.99 ? P BG6 1510 A 1 HETATM 14 O O1P BG6 . . . G 3 3.107 124.209 14.547 1 48.46 ? O1P BG6 1510 A 1 HETATM 15 O O2P BG6 . . . G 3 5.15 124.114 13.054 1 47.41 ? O2P BG6 1510 A 1 HETATM 16 O O3P BG6 . . . G 3 3.756 122.08 13.485 1 48.43 ? O3P BG6 1510 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 16 #