data_2BKI # _model_server_result.job_id HzCNEl4Egmn32xDIac1_Dg _model_server_result.datetime_utc '2024-10-18 16:27:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bki # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1149}' # _entry.id 2BKI # _exptl.entry_id 2BKI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BKI _cell.length_a 104.781 _cell.length_b 250.167 _cell.length_c 67.274 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BKI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 21 B ASP 20 1_555 E CA CA . B CA 1148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc2 B OD1 ASP 23 B ASP 22 1_555 E CA CA . B CA 1148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc3 B OD1 ASP 25 B ASP 24 1_555 E CA CA . B CA 1148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc4 B O THR 27 B THR 26 1_555 E CA CA . B CA 1148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc5 B OE1 GLU 32 B GLU 31 1_555 E CA CA . B CA 1148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.315 ? metalc ? metalc6 B OD2 ASP 57 B ASP 56 1_555 F CA CA . B CA 1149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc7 B OD1 ASN 61 B ASN 60 1_555 F CA CA . B CA 1149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.244 ? metalc ? metalc8 B O THR 63 B THR 62 1_555 F CA CA . B CA 1149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc9 B OD1 ASP 94 B ASP 93 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc10 B OD1 ASP 96 B ASP 95 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? metalc ? metalc11 B OD1 ASN 98 B ASN 97 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? metalc ? metalc12 B ND2 ASN 98 B ASN 97 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.356 ? metalc ? metalc13 B O TYR 100 B TYR 99 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc14 B OE2 GLU 105 B GLU 104 1_555 G CA CA . B CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc15 B OD1 ASP 130 B ASP 129 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc16 B OD2 ASP 132 B ASP 131 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.306 ? metalc ? metalc17 B OD1 ASP 132 B ASP 131 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc18 B OD1 ASP 134 B ASP 133 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc19 B O GLN 136 B GLN 135 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc20 B OE2 GLU 141 B GLU 140 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.32 ? metalc ? metalc21 B OE1 GLU 141 B GLU 140 1_555 H CA CA . B CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2BKI _atom_sites.fract_transf_matrix[1][1] 0.009544 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 A 1 1826 1826 SO4 SO4 . E 4 CA B 1 1148 1148 CA CA . F 4 CA B 1 1149 1149 CA CA . G 4 CA B 1 1150 1150 CA CA . H 4 CA B 1 1151 1151 CA CA . I 5 HOH A 1 2001 2001 HOH HOH . I 5 HOH A 2 2002 2002 HOH HOH . I 5 HOH A 3 2003 2003 HOH HOH . I 5 HOH A 4 2004 2004 HOH HOH . I 5 HOH A 5 2005 2005 HOH HOH . I 5 HOH A 6 2006 2006 HOH HOH . I 5 HOH A 7 2007 2007 HOH HOH . I 5 HOH A 8 2008 2008 HOH HOH . I 5 HOH A 9 2009 2009 HOH HOH . I 5 HOH A 10 2010 2010 HOH HOH . I 5 HOH A 11 2011 2011 HOH HOH . I 5 HOH A 12 2012 2012 HOH HOH . I 5 HOH A 13 2013 2013 HOH HOH . I 5 HOH A 14 2014 2014 HOH HOH . I 5 HOH A 15 2015 2015 HOH HOH . I 5 HOH A 16 2016 2016 HOH HOH . I 5 HOH A 17 2017 2017 HOH HOH . I 5 HOH A 18 2018 2018 HOH HOH . I 5 HOH A 19 2019 2019 HOH HOH . I 5 HOH A 20 2020 2020 HOH HOH . I 5 HOH A 21 2021 2021 HOH HOH . I 5 HOH A 22 2022 2022 HOH HOH . I 5 HOH A 23 2023 2023 HOH HOH . I 5 HOH A 24 2024 2024 HOH HOH . I 5 HOH A 25 2025 2025 HOH HOH . I 5 HOH A 26 2026 2026 HOH HOH . I 5 HOH A 27 2027 2027 HOH HOH . I 5 HOH A 28 2028 2028 HOH HOH . I 5 HOH A 29 2029 2029 HOH HOH . I 5 HOH A 30 2030 2030 HOH HOH . I 5 HOH A 31 2031 2031 HOH HOH . I 5 HOH A 32 2032 2032 HOH HOH . I 5 HOH A 33 2033 2033 HOH HOH . I 5 HOH A 34 2034 2034 HOH HOH . I 5 HOH A 35 2035 2035 HOH HOH . I 5 HOH A 36 2036 2036 HOH HOH . I 5 HOH A 37 2037 2037 HOH HOH . I 5 HOH A 38 2038 2038 HOH HOH . I 5 HOH A 39 2039 2039 HOH HOH . I 5 HOH A 40 2040 2040 HOH HOH . I 5 HOH A 41 2041 2041 HOH HOH . I 5 HOH A 42 2042 2042 HOH HOH . I 5 HOH A 43 2043 2043 HOH HOH . I 5 HOH A 44 2044 2044 HOH HOH . I 5 HOH A 45 2045 2045 HOH HOH . I 5 HOH A 46 2046 2046 HOH HOH . J 5 HOH B 1 2001 2001 HOH HOH . J 5 HOH B 2 2002 2002 HOH HOH . J 5 HOH B 3 2003 2003 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -2.339 _atom_site.Cartn_y 29.942 _atom_site.Cartn_z 25.27 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1149 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #