data_2BKJ
#
_model_server_result.job_id            FoYrIHv-PMO88Jf6X8Omcw 
_model_server_result.datetime_utc      '2024-11-05 00:29:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bkj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":241}' 
#
_entry.id    2BKJ 
#
_exptl.entry_id    2BKJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.7 
_cell.angle_gamma         90 
_cell.entry_id            2BKJ 
_cell.length_a            51.2 
_cell.length_b            85.9 
_cell.length_c            59.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BKJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     2BKJ 
_atom_sites.fract_transf_matrix[1][1]    0.019531 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008983 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011641 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 241 241 FMN FMN . 
D 2 FMN B 1 241 241 FMN FMN . 
E 3 NAD B 1 243 243 NAD NAD . 
F 4 HOH A 1 302 302 HOH HOH . 
F 4 HOH A 2 303 303 HOH HOH . 
F 4 HOH A 3 305 305 HOH HOH . 
F 4 HOH A 4 306 306 HOH HOH . 
F 4 HOH A 5 307 307 HOH HOH . 
F 4 HOH A 6 308 308 HOH HOH . 
F 4 HOH A 7 310 310 HOH HOH . 
F 4 HOH A 8 311 311 HOH HOH . 
F 4 HOH A 9 312 312 HOH HOH . 
F 4 HOH A 10 313 313 HOH HOH . 
F 4 HOH A 11 314 314 HOH HOH . 
F 4 HOH A 12 315 315 HOH HOH . 
F 4 HOH A 13 316 316 HOH HOH . 
F 4 HOH A 14 317 317 HOH HOH . 
F 4 HOH A 15 318 318 HOH HOH . 
F 4 HOH A 16 323 323 HOH HOH . 
F 4 HOH A 17 327 327 HOH HOH . 
F 4 HOH A 18 328 328 HOH HOH . 
F 4 HOH A 19 335 335 HOH HOH . 
F 4 HOH A 20 342 342 HOH HOH . 
F 4 HOH A 21 344 344 HOH HOH . 
F 4 HOH A 22 345 345 HOH HOH . 
F 4 HOH A 23 348 348 HOH HOH . 
F 4 HOH A 24 349 349 HOH HOH . 
F 4 HOH A 25 350 350 HOH HOH . 
F 4 HOH A 26 351 351 HOH HOH . 
F 4 HOH A 27 355 355 HOH HOH . 
F 4 HOH A 28 357 357 HOH HOH . 
F 4 HOH A 29 359 359 HOH HOH . 
F 4 HOH A 30 360 360 HOH HOH . 
F 4 HOH A 31 365 365 HOH HOH . 
F 4 HOH A 32 366 366 HOH HOH . 
F 4 HOH A 33 369 369 HOH HOH . 
F 4 HOH A 34 371 371 HOH HOH . 
F 4 HOH A 35 373 373 HOH HOH . 
F 4 HOH A 36 374 374 HOH HOH . 
F 4 HOH A 37 375 375 HOH HOH . 
F 4 HOH A 38 387 387 HOH HOH . 
F 4 HOH A 39 393 393 HOH HOH . 
F 4 HOH A 40 395 395 HOH HOH . 
F 4 HOH A 41 400 400 HOH HOH . 
F 4 HOH A 42 401 401 HOH HOH . 
G 4 HOH B 1 301 301 HOH HOH . 
G 4 HOH B 2 320 320 HOH HOH . 
G 4 HOH B 3 321 321 HOH HOH . 
G 4 HOH B 4 322 322 HOH HOH . 
G 4 HOH B 5 324 324 HOH HOH . 
G 4 HOH B 6 325 325 HOH HOH . 
G 4 HOH B 7 326 326 HOH HOH . 
G 4 HOH B 8 329 329 HOH HOH . 
G 4 HOH B 9 330 330 HOH HOH . 
G 4 HOH B 10 331 331 HOH HOH . 
G 4 HOH B 11 332 332 HOH HOH . 
G 4 HOH B 12 333 333 HOH HOH . 
G 4 HOH B 13 334 334 HOH HOH . 
G 4 HOH B 14 336 336 HOH HOH . 
G 4 HOH B 15 337 337 HOH HOH . 
G 4 HOH B 16 338 338 HOH HOH . 
G 4 HOH B 17 339 339 HOH HOH . 
G 4 HOH B 18 340 340 HOH HOH . 
G 4 HOH B 19 341 341 HOH HOH . 
G 4 HOH B 20 343 343 HOH HOH . 
G 4 HOH B 21 346 346 HOH HOH . 
G 4 HOH B 22 352 352 HOH HOH . 
G 4 HOH B 23 353 353 HOH HOH . 
G 4 HOH B 24 354 354 HOH HOH . 
G 4 HOH B 25 358 358 HOH HOH . 
G 4 HOH B 26 362 362 HOH HOH . 
G 4 HOH B 27 363 363 HOH HOH . 
G 4 HOH B 28 367 367 HOH HOH . 
G 4 HOH B 29 381 381 HOH HOH . 
G 4 HOH B 30 384 384 HOH HOH . 
G 4 HOH B 31 402 402 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . D 2 7.861 20.449 22.4 1 9.67 ? N1 FMN 241 B 1 
HETATM 2 C C2 FMN . . . D 2 8.912 20.72 23.267 1 10.36 ? C2 FMN 241 B 1 
HETATM 3 O O2 FMN . . . D 2 8.898 21.654 24.058 1 11.45 ? O2 FMN 241 B 1 
HETATM 4 N N3 FMN . . . D 2 9.982 19.848 23.173 1 9.51 ? N3 FMN 241 B 1 
HETATM 5 C C4 FMN . . . D 2 10.045 18.731 22.346 1 9.05 ? C4 FMN 241 B 1 
HETATM 6 O O4 FMN . . . D 2 11.059 18.042 22.405 1 7.79 ? O4 FMN 241 B 1 
HETATM 7 C C4A FMN . . . D 2 8.874 18.54 21.506 1 8.87 ? C4A FMN 241 B 1 
HETATM 8 N N5 FMN . . . D 2 8.915 17.413 20.712 1 7.7 ? N5 FMN 241 B 1 
HETATM 9 C C5A FMN . . . D 2 7.79 17.082 20.012 1 7.71 ? C5A FMN 241 B 1 
HETATM 10 C C6 FMN . . . D 2 7.744 15.83 19.462 1 7.25 ? C6 FMN 241 B 1 
HETATM 11 C C7 FMN . . . D 2 6.586 15.398 18.86 1 7.55 ? C7 FMN 241 B 1 
HETATM 12 C C7M FMN . . . D 2 6.474 13.927 18.403 1 7.48 ? C7M FMN 241 B 1 
HETATM 13 C C8 FMN . . . D 2 5.493 16.259 18.747 1 7.63 ? C8 FMN 241 B 1 
HETATM 14 C C8M FMN . . . D 2 4.244 15.86 17.953 1 7.39 ? C8M FMN 241 B 1 
HETATM 15 C C9 FMN . . . D 2 5.555 17.516 19.279 1 7.62 ? C9 FMN 241 B 1 
HETATM 16 C C9A FMN . . . D 2 6.688 17.931 19.95 1 7.78 ? C9A FMN 241 B 1 
HETATM 17 N N10 FMN . . . D 2 6.672 19.119 20.677 1 8.7 ? N10 FMN 241 B 1 
HETATM 18 C C10 FMN . . . D 2 7.751 19.386 21.508 1 8.82 ? C10 FMN 241 B 1 
HETATM 19 C C1' FMN . . . D 2 5.498 19.732 20.933 1 8.29 ? C1' FMN 241 B 1 
HETATM 20 C C2' FMN . . . D 2 5.344 21.137 20.35 1 8.15 ? C2' FMN 241 B 1 
HETATM 21 O O2' FMN . . . D 2 6.361 21.536 19.456 1 7.45 ? O2' FMN 241 B 1 
HETATM 22 C C3' FMN . . . D 2 3.945 21.499 19.89 1 8.46 ? C3' FMN 241 B 1 
HETATM 23 O O3' FMN . . . D 2 3.181 20.452 19.291 1 7.67 ? O3' FMN 241 B 1 
HETATM 24 C C4' FMN . . . D 2 3.749 22.864 19.212 1 9.31 ? C4' FMN 241 B 1 
HETATM 25 O O4' FMN . . . D 2 4.769 23.409 18.387 1 10.02 ? O4' FMN 241 B 1 
HETATM 26 C C5' FMN . . . D 2 2.376 23.055 18.66 1 8.94 ? C5' FMN 241 B 1 
HETATM 27 O O5' FMN . . . D 2 1.669 23.628 19.742 1 9.75 ? O5' FMN 241 B 1 
HETATM 28 P P FMN . . . D 2 0.624 22.921 20.709 1 10.44 ? P FMN 241 B 1 
HETATM 29 O O1P FMN . . . D 2 -0.648 23.082 19.977 1 9.48 ? O1P FMN 241 B 1 
HETATM 30 O O2P FMN . . . D 2 0.775 23.747 21.919 1 10.62 ? O2P FMN 241 B 1 
HETATM 31 O O3P FMN . . . D 2 1.058 21.512 20.852 1 10.56 ? O3P FMN 241 B 1 
#
_model_server_stats.io_time_ms              98 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#