data_2BKU
#
_model_server_result.job_id            hOMvhlnju3FelYB21MY0-A 
_model_server_result.datetime_utc      '2024-11-01 23:28:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bku 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":221}' 
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_entry.id    2BKU 
#
_exptl.entry_id    2BKU 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BKU 
_cell.length_a            107.021 
_cell.length_b            127.879 
_cell.length_c            161.741 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 2BKU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
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loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 24 A THR 24 1_555 F MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc2 A OG1 THR 42 A THR 42 1_555 F MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? 
metalc ? metalc3 E O2B GTP . A GTP 220 1_555 F MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc4 E O3G GTP . A GTP 220 1_555 F MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc5 F MG MG . A MG 221 1_555 I O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc6 F MG MG . A MG 221 1_555 I O HOH . A HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc7 C OG1 THR 24 C THR 24 1_555 H MG MG . C MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc8 C OG1 THR 42 C THR 42 1_555 H MG MG . C MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc9 G O2B GTP . C GTP 220 1_555 H MG MG . C MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc10 G O3G GTP . C GTP 220 1_555 H MG MG . C MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc11 H MG MG . C MG 221 1_555 K O HOH . C HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc12 H MG MG . C MG 221 1_555 K O HOH . C HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     2BKU 
_atom_sites.fract_transf_matrix[1][1]    0.009344 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00782 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006183 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GTP A 1 220 220 GTP GTP . 
F 4 MG A 1 221 221 MG MG . 
G 3 GTP C 1 220 220 GTP GTP . 
H 4 MG C 1 221 221 MG MG . 
I 5 HOH A 1 2001 2001 HOH HOH . 
I 5 HOH A 2 2002 2002 HOH HOH . 
I 5 HOH A 3 2003 2003 HOH HOH . 
I 5 HOH A 4 2004 2004 HOH HOH . 
J 5 HOH B 1 2001 2001 HOH HOH . 
J 5 HOH B 2 2002 2002 HOH HOH . 
J 5 HOH B 3 2003 2003 HOH HOH . 
J 5 HOH B 4 2004 2004 HOH HOH . 
J 5 HOH B 5 2005 2005 HOH HOH . 
J 5 HOH B 6 2006 2006 HOH HOH . 
J 5 HOH B 7 2007 2007 HOH HOH . 
J 5 HOH B 8 2008 2008 HOH HOH . 
J 5 HOH B 9 2009 2009 HOH HOH . 
J 5 HOH B 10 2010 2010 HOH HOH . 
J 5 HOH B 11 2011 2011 HOH HOH . 
J 5 HOH B 12 2012 2012 HOH HOH . 
J 5 HOH B 13 2013 2013 HOH HOH . 
J 5 HOH B 14 2014 2014 HOH HOH . 
J 5 HOH B 15 2015 2015 HOH HOH . 
J 5 HOH B 16 2016 2016 HOH HOH . 
J 5 HOH B 17 2017 2017 HOH HOH . 
J 5 HOH B 18 2018 2018 HOH HOH . 
J 5 HOH B 19 2019 2019 HOH HOH . 
J 5 HOH B 20 2020 2020 HOH HOH . 
J 5 HOH B 21 2021 2021 HOH HOH . 
J 5 HOH B 22 2022 2022 HOH HOH . 
J 5 HOH B 23 2023 2023 HOH HOH . 
J 5 HOH B 24 2024 2024 HOH HOH . 
J 5 HOH B 25 2025 2025 HOH HOH . 
J 5 HOH B 26 2026 2026 HOH HOH . 
J 5 HOH B 27 2027 2027 HOH HOH . 
J 5 HOH B 28 2028 2028 HOH HOH . 
J 5 HOH B 29 2029 2029 HOH HOH . 
K 5 HOH C 1 2001 2001 HOH HOH . 
K 5 HOH C 2 2002 2002 HOH HOH . 
K 5 HOH C 3 2003 2003 HOH HOH . 
K 5 HOH C 4 2004 2004 HOH HOH . 
K 5 HOH C 5 2005 2005 HOH HOH . 
K 5 HOH C 6 2006 2006 HOH HOH . 
K 5 HOH C 7 2007 2007 HOH HOH . 
L 5 HOH D 1 2001 2001 HOH HOH . 
L 5 HOH D 2 2002 2002 HOH HOH . 
L 5 HOH D 3 2003 2003 HOH HOH . 
L 5 HOH D 4 2004 2004 HOH HOH . 
L 5 HOH D 5 2005 2005 HOH HOH . 
L 5 HOH D 6 2006 2006 HOH HOH . 
L 5 HOH D 7 2007 2007 HOH HOH . 
L 5 HOH D 8 2008 2008 HOH HOH . 
L 5 HOH D 9 2009 2009 HOH HOH . 
L 5 HOH D 10 2010 2010 HOH HOH . 
L 5 HOH D 11 2011 2011 HOH HOH . 
L 5 HOH D 12 2012 2012 HOH HOH . 
L 5 HOH D 13 2013 2013 HOH HOH . 
L 5 HOH D 14 2014 2014 HOH HOH . 
L 5 HOH D 15 2015 2015 HOH HOH . 
L 5 HOH D 16 2016 2016 HOH HOH . 
L 5 HOH D 17 2017 2017 HOH HOH . 
L 5 HOH D 18 2018 2018 HOH HOH . 
L 5 HOH D 19 2019 2019 HOH HOH . 
L 5 HOH D 20 2020 2020 HOH HOH . 
L 5 HOH D 21 2021 2021 HOH HOH . 
L 5 HOH D 22 2022 2022 HOH HOH . 
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_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -9.637 
_atom_site.Cartn_y               14.657 
_atom_site.Cartn_z               -25.518 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        41.52 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           221 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
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_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    66 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
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