data_2BLJ # _model_server_result.job_id cvsfxbnOvyAnnWjZE9EGmA _model_server_result.datetime_utc '2024-10-10 17:20:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2blj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1154}' # _entry.id 2BLJ # _exptl.entry_id 2BLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2BLJ _cell.length_a 91.87 _cell.length_b 91.87 _cell.length_c 46.04 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 93 _struct_conn.ptnr1_auth_asym_id M _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 93 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id M _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 1154 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.201 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 117 n n CHA C4D HEM doub 118 n n CHA HHA HEM sing 119 n n CHB C4A HEM sing 120 n n CHB C1B HEM doub 121 n n CHB HHB HEM sing 122 n n CHC C4B HEM sing 123 n n CHC C1C HEM doub 124 n n CHC HHC HEM sing 125 n n CHD C4C HEM doub 126 n n CHD C1D HEM sing 127 n n CHD HHD HEM sing 128 n n C1A C2A HEM doub 129 n y C1A NA HEM sing 130 n y C2A C3A HEM sing 131 n y C2A CAA HEM sing 132 n n C3A C4A HEM doub 133 n y C3A CMA HEM sing 134 n n C4A NA HEM sing 135 n y CMA HMA HEM sing 136 n n CMA HMAA HEM sing 137 n n CMA HMAB HEM sing 138 n n CAA CBA HEM sing 139 n n CAA HAA HEM sing 140 n n CAA HAAA HEM sing 141 n n CBA CGA HEM sing 142 n n CBA HBA HEM sing 143 n n CBA HBAA HEM sing 144 n n CGA O1A HEM doub 145 n n CGA O2A HEM sing 146 n n C1B C2B HEM sing 147 n n C1B NB HEM sing 148 n n C2B C3B HEM doub 149 n n C2B CMB HEM sing 150 n n C3B C4B HEM sing 151 n n C3B CAB HEM sing 152 n n C4B NB HEM doub 153 n n CMB HMB HEM sing 154 n n CMB HMBA HEM sing 155 n n CMB HMBB HEM sing 156 n n CAB CBB HEM doub 157 n n CAB HAB HEM sing 158 n n CBB HBB HEM sing 159 n n CBB HBBA HEM sing 160 n n C1C C2C HEM sing 161 n y C1C NC HEM sing 162 n y C2C C3C HEM doub 163 n y C2C CMC HEM sing 164 n n C3C C4C HEM sing 165 n y C3C CAC HEM sing 166 n n C4C NC HEM sing 167 n y CMC HMC HEM sing 168 n n CMC HMCA HEM sing 169 n n CMC HMCB HEM sing 170 n n CAC CBC HEM doub 171 n n CAC HAC HEM sing 172 n n CBC HBC HEM sing 173 n n CBC HBCA HEM sing 174 n n C1D C2D HEM sing 175 n n C1D ND HEM doub 176 n n C2D C3D HEM doub 177 n n C2D CMD HEM sing 178 n n C3D C4D HEM sing 179 n n C3D CAD HEM sing 180 n n C4D ND HEM sing 181 n n CMD HMD HEM sing 182 n n CMD HMDA HEM sing 183 n n CMD HMDB HEM sing 184 n n CAD CBD HEM sing 185 n n CAD HAD HEM sing 186 n n CAD HADA HEM sing 187 n n CBD CGD HEM sing 188 n n CBD HBD HEM sing 189 n n CBD HBDA HEM sing 190 n n CGD O1D HEM doub 191 n n CGD O2D HEM sing 192 n n O2A H2A HEM sing 193 n n O2D H2D HEM sing 194 n n FE NA HEM sing 195 n n FE NB HEM sing 196 n n FE NC HEM sing 197 n n FE ND HEM sing 198 n n # _atom_sites.entry_id 2BLJ _atom_sites.fract_transf_matrix[1][1] 0.010885 _atom_sites.fract_transf_matrix[1][2] 0.006284 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM M 1 1154 1154 HEM HEM . C 3 CMO M 1 1155 1155 CMO CMO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 38.072 2.279 11.195 1 12.96 ? CHA HEM 1154 M 1 HETATM 2 C CHB HEM . . . B 2 37.403 5.301 7.396 1 10.23 ? CHB HEM 1154 M 1 HETATM 3 C CHC HEM . . . B 2 32.884 6.208 8.917 1 12.3 ? CHC HEM 1154 M 1 HETATM 4 C CHD HEM . . . B 2 33.5 3.093 12.601 1 13.83 ? CHD HEM 1154 M 1 HETATM 5 C C1A HEM . . . B 2 38.276 3.052 10.052 1 13.69 ? C1A HEM 1154 M 1 HETATM 6 C C2A HEM . . . B 2 39.519 3.073 9.314 1 12.83 ? C2A HEM 1154 M 1 HETATM 7 C C3A HEM . . . B 2 39.321 3.9 8.256 1 12.23 ? C3A HEM 1154 M 1 HETATM 8 C C4A HEM . . . B 2 37.962 4.429 8.341 1 12 ? C4A HEM 1154 M 1 HETATM 9 C CMA HEM . . . B 2 40.325 4.231 7.158 1 12.41 ? CMA HEM 1154 M 1 HETATM 10 C CAA HEM . . . B 2 40.785 2.253 9.618 1 14.78 ? CAA HEM 1154 M 1 HETATM 11 C CBA HEM . . . B 2 40.941 1.058 8.674 1 17.78 ? CBA HEM 1154 M 1 HETATM 12 C CGA HEM . . . B 2 39.693 0.188 8.622 1 20.97 ? CGA HEM 1154 M 1 HETATM 13 O O1A HEM . . . B 2 39.321 -0.392 9.665 1 21.37 ? O1A HEM 1154 M 1 HETATM 14 O O2A HEM . . . B 2 39.078 0.088 7.536 1 23.37 ? O2A HEM 1154 M 1 HETATM 15 C C1B HEM . . . B 2 36.078 5.755 7.411 1 10.45 ? C1B HEM 1154 M 1 HETATM 16 C C2B HEM . . . B 2 35.49 6.706 6.468 1 12.25 ? C2B HEM 1154 M 1 HETATM 17 C C3B HEM . . . B 2 34.222 6.975 6.918 1 10.96 ? C3B HEM 1154 M 1 HETATM 18 C C4B HEM . . . B 2 34.03 6.163 8.121 1 10.83 ? C4B HEM 1154 M 1 HETATM 19 C CMB HEM . . . B 2 36.162 7.284 5.216 1 12.6 ? CMB HEM 1154 M 1 HETATM 20 C CAB HEM . . . B 2 33.279 7.854 6.37 1 11.54 ? CAB HEM 1154 M 1 HETATM 21 C CBB HEM . . . B 2 33.507 9.277 6.278 1 14.37 ? CBB HEM 1154 M 1 HETATM 22 C C1C HEM . . . B 2 32.703 5.498 10.109 1 13.85 ? C1C HEM 1154 M 1 HETATM 23 C C2C HEM . . . B 2 31.518 5.636 10.965 1 12.97 ? C2C HEM 1154 M 1 HETATM 24 C C3C HEM . . . B 2 31.698 4.748 12.017 1 14.6 ? C3C HEM 1154 M 1 HETATM 25 C C4C HEM . . . B 2 32.986 4.077 11.776 1 14.09 ? C4C HEM 1154 M 1 HETATM 26 C CMC HEM . . . B 2 30.31 6.578 10.696 1 12.07 ? CMC HEM 1154 M 1 HETATM 27 C CAC HEM . . . B 2 30.9 4.496 13.144 1 15.69 ? CAC HEM 1154 M 1 HETATM 28 C CBC HEM . . . B 2 29.769 5.27 13.627 1 19.85 ? CBC HEM 1154 M 1 HETATM 29 C C1D HEM . . . B 2 34.792 2.585 12.499 1 14.54 ? C1D HEM 1154 M 1 HETATM 30 C C2D HEM . . . B 2 35.382 1.726 13.496 1 16.27 ? C2D HEM 1154 M 1 HETATM 31 C C3D HEM . . . B 2 36.674 1.552 13.156 1 16.12 ? C3D HEM 1154 M 1 HETATM 32 C C4D HEM . . . B 2 36.873 2.254 11.898 1 14.43 ? C4D HEM 1154 M 1 HETATM 33 C CMD HEM . . . B 2 34.692 1.14 14.728 1 16.48 ? CMD HEM 1154 M 1 HETATM 34 C CAD HEM . . . B 2 37.725 0.851 14.012 1 18.2 ? CAD HEM 1154 M 1 HETATM 35 C CBD HEM . . . B 2 38.44 1.824 14.945 1 22.73 ? CBD HEM 1154 M 1 HETATM 36 C CGD HEM . . . B 2 39.481 1.144 15.815 1 25.33 ? CGD HEM 1154 M 1 HETATM 37 O O1D HEM . . . B 2 39.102 0.326 16.679 1 28.93 ? O1D HEM 1154 M 1 HETATM 38 O O2D HEM . . . B 2 40.682 1.424 15.63 1 28.29 ? O2D HEM 1154 M 1 HETATM 39 N NA HEM . . . B 2 37.302 3.88 9.438 1 12.05 ? NA HEM 1154 M 1 HETATM 40 N NB HEM . . . B 2 35.164 5.413 8.409 1 12.17 ? NB HEM 1154 M 1 HETATM 41 N NC HEM . . . B 2 33.623 4.579 10.636 1 12.93 ? NC HEM 1154 M 1 HETATM 42 N ND HEM . . . B 2 35.714 2.935 11.518 1 14.31 ? ND HEM 1154 M 1 HETATM 43 FE FE HEM . . . B 2 35.447 4.177 9.945 1 13.13 ? FE HEM 1154 M 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 43 #