data_2BML # _model_server_result.job_id xbabF0B8Z-wBAcudanMF_g _model_server_result.datetime_utc '2024-12-26 23:31:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1319}' # _entry.id 2BML # _exptl.entry_id 2BML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.368 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DEXTROFLOXACINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BML _cell.length_a 101.67 _cell.length_b 94.48 _cell.length_c 38.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BML _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H20 F N3 O4' _chem_comp.formula_weight 361.368 _chem_comp.id XED _chem_comp.mon_nstd_flag . _chem_comp.name DEXTROFLOXACINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XED sing 460 n n C1 N3 XED sing 461 n n C1 H1C1 XED sing 462 n n C1 H1C2 XED sing 463 n n C2 N4 XED sing 464 n n C2 H2C1 XED sing 465 n n C2 H2C2 XED sing 466 n n N3 C5 XED sing 467 n n N3 C8 XED sing 468 n n N4 C6 XED sing 469 n n N4 C7 XED sing 470 n n C5 C6 XED sing 471 n n C5 H5C1 XED sing 472 n n C5 H5C2 XED sing 473 n n C6 H6C1 XED sing 474 n n C6 H6C2 XED sing 475 n n C7 H7C1 XED sing 476 n n C7 H7C2 XED sing 477 n n C7 H7C3 XED sing 478 n n C8 C9 XED doub 479 n y C8 C10 XED sing 480 n y C9 C12 XED sing 481 n y C9 O15 XED sing 482 n n C10 F11 XED sing 483 n n C10 C13 XED doub 484 n y C12 C14 XED doub 485 n y C12 N16 XED sing 486 n y C13 C14 XED sing 487 n y C13 H13 XED sing 488 n n C14 C22 XED sing 489 n y O15 C19 XED sing 490 n n N16 C17 XED sing 491 n y N16 C18 XED sing 492 n n C17 C21 XED doub 493 n y C17 H17 XED sing 494 n n C18 C19 XED sing 495 n n C18 C20 XED sing 496 n n C18 H18 XED sing 497 n n C19 H191 XED sing 498 n n C19 H192 XED sing 499 n n C20 H201 XED sing 500 n n C20 H202 XED sing 501 n n C20 H203 XED sing 502 n n C21 C22 XED sing 503 n y C21 C24 XED sing 504 n n C22 O26 XED doub 505 n n O23 C24 XED doub 506 n n C24 O25 XED sing 507 n n O25 H25 XED sing 508 n n # _atom_sites.entry_id 2BML _atom_sites.fract_transf_matrix[1][1] 0.009836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010584 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRS A 1 1319 1319 TRS TRS . D 2 TRS A 1 1320 1320 TRS TRS . E 3 P6G A 1 1321 1321 P6G P6G . F 4 XED B 1 1319 1319 XED XED . G 3 P6G B 1 1320 1320 P6G P6G . H 5 PG4 B 1 1321 1321 PG4 PG4 . I 6 SO4 B 1 1322 1322 SO4 SO4 . J 6 SO4 B 1 1323 1323 SO4 SO4 . K 6 SO4 B 1 1324 1324 SO4 SO4 . L 7 HOH A 1 2001 2001 HOH HOH . L 7 HOH A 2 2002 2002 HOH HOH . L 7 HOH A 3 2003 2003 HOH HOH . L 7 HOH A 4 2004 2004 HOH HOH . L 7 HOH A 5 2005 2005 HOH HOH . L 7 HOH A 6 2006 2006 HOH HOH . L 7 HOH A 7 2007 2007 HOH HOH . L 7 HOH A 8 2008 2008 HOH HOH . L 7 HOH A 9 2009 2009 HOH HOH . L 7 HOH A 10 2010 2010 HOH HOH . L 7 HOH A 11 2011 2011 HOH HOH . L 7 HOH A 12 2012 2012 HOH HOH . L 7 HOH A 13 2013 2013 HOH HOH . L 7 HOH A 14 2014 2014 HOH HOH . L 7 HOH A 15 2015 2015 HOH HOH . L 7 HOH A 16 2016 2016 HOH HOH . L 7 HOH A 17 2017 2017 HOH HOH . L 7 HOH A 18 2018 2018 HOH HOH . L 7 HOH A 19 2019 2019 HOH HOH . M 7 HOH B 1 2001 2001 HOH HOH . M 7 HOH B 2 2002 2002 HOH HOH . M 7 HOH B 3 2003 2003 HOH HOH . M 7 HOH B 4 2004 2004 HOH HOH . M 7 HOH B 5 2005 2005 HOH HOH . M 7 HOH B 6 2006 2006 HOH HOH . M 7 HOH B 7 2007 2007 HOH HOH . M 7 HOH B 8 2008 2008 HOH HOH . M 7 HOH B 9 2009 2009 HOH HOH . M 7 HOH B 10 2010 2010 HOH HOH . M 7 HOH B 11 2011 2011 HOH HOH . M 7 HOH B 12 2012 2012 HOH HOH . M 7 HOH B 13 2013 2013 HOH HOH . M 7 HOH B 14 2014 2014 HOH HOH . M 7 HOH B 15 2015 2015 HOH HOH . M 7 HOH B 16 2016 2016 HOH HOH . M 7 HOH B 17 2017 2017 HOH HOH . M 7 HOH B 18 2018 2018 HOH HOH . M 7 HOH B 19 2019 2019 HOH HOH . M 7 HOH B 20 2020 2020 HOH HOH . M 7 HOH B 21 2021 2021 HOH HOH . M 7 HOH B 22 2022 2022 HOH HOH . M 7 HOH B 23 2023 2023 HOH HOH . M 7 HOH B 24 2024 2024 HOH HOH . M 7 HOH B 25 2025 2025 HOH HOH . M 7 HOH B 26 2026 2026 HOH HOH . M 7 HOH B 27 2027 2027 HOH HOH . M 7 HOH B 28 2028 2028 HOH HOH . M 7 HOH B 29 2029 2029 HOH HOH . M 7 HOH B 30 2030 2030 HOH HOH . M 7 HOH B 31 2031 2031 HOH HOH . M 7 HOH B 32 2032 2032 HOH HOH . M 7 HOH B 33 2033 2033 HOH HOH . M 7 HOH B 34 2034 2034 HOH HOH . M 7 HOH B 35 2035 2035 HOH HOH . M 7 HOH B 36 2036 2036 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XED . . . F 4 44.314 12.376 9.749 1 75.84 ? C1 XED 1319 B 1 HETATM 2 C C2 XED . . . F 4 44.995 13.741 10.092 1 74.53 ? C2 XED 1319 B 1 HETATM 3 N N3 XED . . . F 4 45.323 11.322 9.962 1 77.28 ? N3 XED 1319 B 1 HETATM 4 N N4 XED . . . F 4 45.45 13.709 11.507 1 74.79 ? N4 XED 1319 B 1 HETATM 5 C C5 XED . . . F 4 45.696 11.264 11.389 1 76.56 ? C5 XED 1319 B 1 HETATM 6 C C6 XED . . . F 4 46.384 12.603 11.781 1 75.45 ? C6 XED 1319 B 1 HETATM 7 C C7 XED . . . F 4 46.105 14.982 11.862 1 73.41 ? C7 XED 1319 B 1 HETATM 8 C C8 XED . . . F 4 45.002 10.039 9.341 1 80.32 ? C8 XED 1319 B 1 HETATM 9 C C9 XED . . . F 4 44.396 8.926 10.037 1 81.98 ? C9 XED 1319 B 1 HETATM 10 C C10 XED . . . F 4 45.323 9.878 7.936 1 82.16 ? C10 XED 1319 B 1 HETATM 11 F F11 XED . . . F 4 45.879 10.868 7.26 1 83.77 ? F11 XED 1319 B 1 HETATM 12 C C12 XED . . . F 4 44.122 7.706 9.375 1 83.66 ? C12 XED 1319 B 1 HETATM 13 C C13 XED . . . F 4 45.041 8.642 7.262 1 83.24 ? C13 XED 1319 B 1 HETATM 14 C C14 XED . . . F 4 44.445 7.561 7.978 1 84.24 ? C14 XED 1319 B 1 HETATM 15 O O15 XED . . . F 4 44.031 8.971 11.404 1 82.35 ? O15 XED 1319 B 1 HETATM 16 N N16 XED . . . F 4 43.525 6.655 10.168 1 84.27 ? N16 XED 1319 B 1 HETATM 17 C C17 XED . . . F 4 43.242 5.483 9.514 1 85.33 ? C17 XED 1319 B 1 HETATM 18 C C18 XED . . . F 4 42.337 7.101 11.026 1 83.89 ? C18 XED 1319 B 1 HETATM 19 C C19 XED . . . F 4 42.723 8.415 11.805 1 82.88 ? C19 XED 1319 B 1 HETATM 20 C C20 XED . . . F 4 40.948 6.411 11.089 1 84.05 ? C20 XED 1319 B 1 HETATM 21 C C21 XED . . . F 4 43.48 5.165 8.205 1 86.28 ? C21 XED 1319 B 1 HETATM 22 C C22 XED . . . F 4 44.114 6.216 7.336 1 85.6 ? C22 XED 1319 B 1 HETATM 23 O O23 XED . . . F 4 42.598 2.976 8.436 1 87.49 ? O23 XED 1319 B 1 HETATM 24 C C24 XED . . . F 4 43.111 3.807 7.693 1 86.83 ? C24 XED 1319 B 1 HETATM 25 O O25 XED . . . F 4 43.317 3.495 6.523 1 86.43 ? O25 XED 1319 B 1 HETATM 26 O O26 XED . . . F 4 44.362 6.011 6.141 1 85.22 ? O26 XED 1319 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #