data_2BN4
#
_model_server_result.job_id            2I5Uf-2QbZNdEqqA6uW6XA 
_model_server_result.datetime_utc      '2024-10-19 09:40:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bn4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":750}' 
#
_entry.id    2BN4 
#
_exptl.entry_id    2BN4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BN4 
_cell.length_a            78.14 
_cell.length_b            77.843 
_cell.length_c            261.495 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BN4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PQS monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,I 1 1 
B,F,G,H,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     2BN4 
_atom_sites.fract_transf_matrix[1][1]    0.012798 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012846 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003824 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 750 750 FAD FAD . 
D 3 FMN A 1 751 751 FMN FMN . 
E 4 NAP A 1 753 753 NAP NAP . 
F 2 FAD B 1 750 750 FAD FAD . 
G 3 FMN B 1 751 751 FMN FMN . 
H 4 NAP B 1 753 753 NAP NAP . 
I 5 HOH A 1 2001 2001 HOH HOH . 
I 5 HOH A 2 2002 2002 HOH HOH . 
I 5 HOH A 3 2003 2003 HOH HOH . 
I 5 HOH A 4 2004 2004 HOH HOH . 
I 5 HOH A 5 2005 2005 HOH HOH . 
I 5 HOH A 6 2006 2006 HOH HOH . 
I 5 HOH A 7 2007 2007 HOH HOH . 
I 5 HOH A 8 2008 2008 HOH HOH . 
I 5 HOH A 9 2009 2009 HOH HOH . 
I 5 HOH A 10 2010 2010 HOH HOH . 
I 5 HOH A 11 2011 2011 HOH HOH . 
I 5 HOH A 12 2012 2012 HOH HOH . 
I 5 HOH A 13 2013 2013 HOH HOH . 
I 5 HOH A 14 2014 2014 HOH HOH . 
I 5 HOH A 15 2015 2015 HOH HOH . 
I 5 HOH A 16 2016 2016 HOH HOH . 
I 5 HOH A 17 2017 2017 HOH HOH . 
I 5 HOH A 18 2018 2018 HOH HOH . 
I 5 HOH A 19 2019 2019 HOH HOH . 
I 5 HOH A 20 2020 2020 HOH HOH . 
I 5 HOH A 21 2021 2021 HOH HOH . 
I 5 HOH A 22 2022 2022 HOH HOH . 
I 5 HOH A 23 2023 2023 HOH HOH . 
I 5 HOH A 24 2024 2024 HOH HOH . 
I 5 HOH A 25 2025 2025 HOH HOH . 
I 5 HOH A 26 2026 2026 HOH HOH . 
I 5 HOH A 27 2027 2027 HOH HOH . 
I 5 HOH A 28 2028 2028 HOH HOH . 
I 5 HOH A 29 2029 2029 HOH HOH . 
I 5 HOH A 30 2030 2030 HOH HOH . 
I 5 HOH A 31 2031 2031 HOH HOH . 
I 5 HOH A 32 2032 2032 HOH HOH . 
I 5 HOH A 33 2033 2033 HOH HOH . 
J 5 HOH B 1 2001 2001 HOH HOH . 
J 5 HOH B 2 2002 2002 HOH HOH . 
J 5 HOH B 3 2003 2003 HOH HOH . 
J 5 HOH B 4 2004 2004 HOH HOH . 
J 5 HOH B 5 2005 2005 HOH HOH . 
J 5 HOH B 6 2006 2006 HOH HOH . 
J 5 HOH B 7 2007 2007 HOH HOH . 
J 5 HOH B 8 2008 2008 HOH HOH . 
J 5 HOH B 9 2009 2009 HOH HOH . 
J 5 HOH B 10 2010 2010 HOH HOH . 
J 5 HOH B 11 2011 2011 HOH HOH . 
J 5 HOH B 12 2012 2012 HOH HOH . 
J 5 HOH B 13 2013 2013 HOH HOH . 
J 5 HOH B 14 2014 2014 HOH HOH . 
J 5 HOH B 15 2015 2015 HOH HOH . 
J 5 HOH B 16 2016 2016 HOH HOH . 
J 5 HOH B 17 2017 2017 HOH HOH . 
J 5 HOH B 18 2018 2018 HOH HOH . 
J 5 HOH B 19 2019 2019 HOH HOH . 
J 5 HOH B 20 2020 2020 HOH HOH . 
J 5 HOH B 21 2021 2021 HOH HOH . 
J 5 HOH B 22 2022 2022 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 96.047 41.752 259.487 1 67.53 ? PA FAD 750 B 1 
HETATM 2 O O1A FAD . . . F 2 96.724 43.045 259.225 1 68.85 ? O1A FAD 750 B 1 
HETATM 3 O O2A FAD . . . F 2 95.247 41.126 258.4 1 69.67 ? O2A FAD 750 B 1 
HETATM 4 O O5B FAD . . . F 2 97.181 40.787 259.991 1 64.65 ? O5B FAD 750 B 1 
HETATM 5 C C5B FAD . . . F 2 96.978 39.432 260.342 1 62.6 ? C5B FAD 750 B 1 
HETATM 6 C C4B FAD . . . F 2 98.302 38.882 260.863 1 63.66 ? C4B FAD 750 B 1 
HETATM 7 O O4B FAD . . . F 2 99.222 38.592 259.764 1 62.39 ? O4B FAD 750 B 1 
HETATM 8 C C3B FAD . . . F 2 99.092 39.774 261.856 1 63.96 ? C3B FAD 750 B 1 
HETATM 9 O O3B FAD . . . F 2 99.578 39.092 262.994 1 64.28 ? O3B FAD 750 B 1 
HETATM 10 C C2B FAD . . . F 2 100.182 40.353 260.958 1 64.77 ? C2B FAD 750 B 1 
HETATM 11 O O2B FAD . . . F 2 101.316 40.953 261.536 1 66.9 ? O2B FAD 750 B 1 
HETATM 12 C C1B FAD . . . F 2 100.496 39.18 260.069 1 63.77 ? C1B FAD 750 B 1 
HETATM 13 N N9A FAD . . . F 2 101.199 39.515 258.837 1 64.56 ? N9A FAD 750 B 1 
HETATM 14 C C8A FAD . . . F 2 101.309 40.725 258.226 1 66.24 ? C8A FAD 750 B 1 
HETATM 15 N N7A FAD . . . F 2 102.023 40.709 257.121 1 67.77 ? N7A FAD 750 B 1 
HETATM 16 C C5A FAD . . . F 2 102.412 39.393 256.996 1 65.94 ? C5A FAD 750 B 1 
HETATM 17 C C6A FAD . . . F 2 103.213 38.714 256.004 1 66.69 ? C6A FAD 750 B 1 
HETATM 18 N N6A FAD . . . F 2 103.742 39.36 254.952 1 65.98 ? N6A FAD 750 B 1 
HETATM 19 N N1A FAD . . . F 2 103.426 37.373 256.161 1 67.86 ? N1A FAD 750 B 1 
HETATM 20 C C2A FAD . . . F 2 102.873 36.749 257.243 1 67.06 ? C2A FAD 750 B 1 
HETATM 21 N N3A FAD . . . F 2 102.117 37.291 258.22 1 65.41 ? N3A FAD 750 B 1 
HETATM 22 C C4A FAD . . . F 2 101.925 38.658 258.019 1 65.25 ? C4A FAD 750 B 1 
HETATM 23 N N1 FAD . . . F 2 89.952 39.92 267.35 1 50.5 ? N1 FAD 750 B 1 
HETATM 24 C C2 FAD . . . F 2 90.032 40.518 268.565 1 50.41 ? C2 FAD 750 B 1 
HETATM 25 O O2 FAD . . . F 2 91.093 41.069 268.986 1 49.1 ? O2 FAD 750 B 1 
HETATM 26 N N3 FAD . . . F 2 88.874 40.57 269.372 1 51.33 ? N3 FAD 750 B 1 
HETATM 27 C C4 FAD . . . F 2 87.631 39.987 269.042 1 50.59 ? C4 FAD 750 B 1 
HETATM 28 O O4 FAD . . . F 2 86.659 40.091 269.819 1 50.39 ? O4 FAD 750 B 1 
HETATM 29 C C4X FAD . . . F 2 87.584 39.322 267.801 1 50.73 ? C4X FAD 750 B 1 
HETATM 30 N N5 FAD . . . F 2 86.371 38.71 267.394 1 50.87 ? N5 FAD 750 B 1 
HETATM 31 C C5X FAD . . . F 2 86.325 38.115 266.128 1 51.68 ? C5X FAD 750 B 1 
HETATM 32 C C6 FAD . . . F 2 85.1 37.496 265.69 1 51.49 ? C6 FAD 750 B 1 
HETATM 33 C C7 FAD . . . F 2 84.986 36.912 264.437 1 53.13 ? C7 FAD 750 B 1 
HETATM 34 C C7M FAD . . . F 2 83.642 36.276 264.048 1 52.08 ? C7M FAD 750 B 1 
HETATM 35 C C8 FAD . . . F 2 86.104 36.921 263.542 1 53.83 ? C8 FAD 750 B 1 
HETATM 36 C C8M FAD . . . F 2 86.058 36.317 262.151 1 52.97 ? C8M FAD 750 B 1 
HETATM 37 C C9 FAD . . . F 2 87.35 37.538 263.974 1 52.77 ? C9 FAD 750 B 1 
HETATM 38 C C9A FAD . . . F 2 87.486 38.124 265.236 1 51.75 ? C9A FAD 750 B 1 
HETATM 39 N N10 FAD . . . F 2 88.721 38.755 265.703 1 52.61 ? N10 FAD 750 B 1 
HETATM 40 C C10 FAD . . . F 2 88.756 39.335 266.968 1 51.51 ? C10 FAD 750 B 1 
HETATM 41 C C1' FAD . . . F 2 89.97 38.836 264.889 1 54.99 ? C1' FAD 750 B 1 
HETATM 42 C C2' FAD . . . F 2 90.075 40.195 264.15 1 55.21 ? C2' FAD 750 B 1 
HETATM 43 O O2' FAD . . . F 2 88.95 40.37 263.303 1 54.3 ? O2' FAD 750 B 1 
HETATM 44 C C3' FAD . . . F 2 91.354 40.332 263.337 1 56.45 ? C3' FAD 750 B 1 
HETATM 45 O O3' FAD . . . F 2 91.758 39.071 262.832 1 56.63 ? O3' FAD 750 B 1 
HETATM 46 C C4' FAD . . . F 2 92.51 40.973 264.15 1 58.41 ? C4' FAD 750 B 1 
HETATM 47 O O4' FAD . . . F 2 92.142 42.234 264.68 1 63.2 ? O4' FAD 750 B 1 
HETATM 48 C C5' FAD . . . F 2 93.697 41.117 263.268 1 59.97 ? C5' FAD 750 B 1 
HETATM 49 O O5' FAD . . . F 2 93.497 42.37 262.581 1 61.88 ? O5' FAD 750 B 1 
HETATM 50 P P FAD . . . F 2 94.632 43.048 261.752 1 62.03 ? P FAD 750 B 1 
HETATM 51 O O1P FAD . . . F 2 94.046 44.245 261.144 1 60.7 ? O1P FAD 750 B 1 
HETATM 52 O O2P FAD . . . F 2 95.783 43.246 262.66 1 62.36 ? O2P FAD 750 B 1 
HETATM 53 O O3P FAD . . . F 2 95.072 41.9 260.721 1 64.5 ? O3P FAD 750 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#