data_2BOW # _model_server_result.job_id uiXlvvcOcC0Js6a0qLIGvA _model_server_result.datetime_utc '2024-12-21 13:18:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":162}' # _entry.id 2BOW # _exptl.entry_id 2BOW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.389 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRAPHENYLPHOSPHONIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2BOW _cell.length_a 82.6 _cell.length_b 82.6 _cell.length_c 104.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2 A,B,C,D,E 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+2/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 41.3 71.533698 69.466667 3 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -41.3 71.533698 34.733333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 19 A GLU 19 1_555 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc2 A OE2 GLU 19 A GLU 19 1_555 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 A OE2 GLU 19 A GLU 19 10_665 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 A OE1 GLU 19 A GLU 19 10_665 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc5 A NE2 HIS 70 A HIS 70 1_555 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc6 A NE2 HIS 70 A HIS 70 10_665 B MN MN . A MN 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? # _chem_comp.formula 'C24 H20 P 1' _chem_comp.formula_weight 339.389 _chem_comp.id P4P _chem_comp.mon_nstd_flag . _chem_comp.name TETRAPHENYLPHOSPHONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P C1A P4P sing 237 n n P C1C P4P sing 238 n n P C1D P4P sing 239 n n P C1B P4P sing 240 n n C1A C2A P4P sing 241 n y C1A C6A P4P doub 242 n y C2A C3A P4P doub 243 n y C2A H2A P4P sing 244 n n C3A C4A P4P sing 245 n y C3A H3A P4P sing 246 n n C4A C5A P4P doub 247 n y C4A H4A P4P sing 248 n n C5A C6A P4P sing 249 n y C5A H5A P4P sing 250 n n C6A H6A P4P sing 251 n n C1C C6C P4P doub 252 n y C1C C2C P4P sing 253 n y C6C C5C P4P sing 254 n y C6C H6C P4P sing 255 n n C5C C4C P4P doub 256 n y C5C H5C P4P sing 257 n n C4C C3C P4P sing 258 n y C4C H4C P4P sing 259 n n C3C C2C P4P doub 260 n y C3C H3C P4P sing 261 n n C2C H2C P4P sing 262 n n C1D C6D P4P doub 263 n y C1D C2D P4P sing 264 n y C6D C5D P4P sing 265 n y C6D H6D P4P sing 266 n n C5D C4D P4P doub 267 n y C5D H5D P4P sing 268 n n C4D C3D P4P sing 269 n y C4D H4D P4P sing 270 n n C3D C2D P4P doub 271 n y C3D H3D P4P sing 272 n n C2D H2D P4P sing 273 n n C6B C5B P4P doub 274 n y C6B C1B P4P sing 275 n y C6B H6B P4P sing 276 n n C5B C4B P4P sing 277 n y C5B H5B P4P sing 278 n n C4B C3B P4P doub 279 n y C4B H4B P4P sing 280 n n C3B C2B P4P sing 281 n y C3B H3B P4P sing 282 n n C2B C1B P4P doub 283 n y C2B H2B P4P sing 284 n n # _atom_sites.entry_id 2BOW _atom_sites.fract_transf_matrix[1][1] 0.012107 _atom_sites.fract_transf_matrix[1][2] 0.00699 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 160 2 MN MN . C 3 SO4 A 1 161 3 SO4 SO4 . D 4 P4P A 1 162 1 P4P P4P . E 5 HOH A 1 163 4 HOH HOH . E 5 HOH A 2 164 5 HOH HOH . E 5 HOH A 3 165 6 HOH HOH . E 5 HOH A 4 166 8 HOH HOH . E 5 HOH A 5 167 11 HOH HOH . E 5 HOH A 6 168 12 HOH HOH . E 5 HOH A 7 169 14 HOH HOH . E 5 HOH A 8 170 15 HOH HOH . E 5 HOH A 9 171 16 HOH HOH . E 5 HOH A 10 172 17 HOH HOH . E 5 HOH A 11 173 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P P4P . . . D 4 -16.445 73.074 26.211 1 87.72 ? P P4P 162 A 1 HETATM 2 C C1A P4P . . . D 4 -16.254 74.375 25.032 1 100 ? C1A P4P 162 A 1 HETATM 3 C C2A P4P . . . D 4 -16.972 75.572 25.09 1 100 ? C2A P4P 162 A 1 HETATM 4 C C3A P4P . . . D 4 -16.775 76.56 24.123 1 100 ? C3A P4P 162 A 1 HETATM 5 C C4A P4P . . . D 4 -15.854 76.358 23.092 1 81.73 ? C4A P4P 162 A 1 HETATM 6 C C5A P4P . . . D 4 -15.132 75.168 23.025 1 100 ? C5A P4P 162 A 1 HETATM 7 C C6A P4P . . . D 4 -15.328 74.18 23.991 1 100 ? C6A P4P 162 A 1 HETATM 8 C C1C P4P . . . D 4 -15.26 73.254 27.521 1 55.2 ? C1C P4P 162 A 1 HETATM 9 C C6C P4P . . . D 4 -13.935 73.551 27.178 1 100 ? C6C P4P 162 A 1 HETATM 10 C C5C P4P . . . D 4 -12.955 73.699 28.172 1 100 ? C5C P4P 162 A 1 HETATM 11 C C4C P4P . . . D 4 -13.296 73.541 29.507 1 35.86 ? C4C P4P 162 A 1 HETATM 12 C C3C P4P . . . D 4 -14.611 73.239 29.861 1 100 ? C3C P4P 162 A 1 HETATM 13 C C2C P4P . . . D 4 -15.589 73.095 28.866 1 100 ? C2C P4P 162 A 1 HETATM 14 C C1D P4P . . . D 4 -16.209 71.507 25.315 1 85.69 ? C1D P4P 162 A 1 HETATM 15 C C6D P4P . . . D 4 -16.781 71.408 24.039 1 100 ? C6D P4P 162 A 1 HETATM 16 C C5D P4P . . . D 4 -16.643 70.24 23.287 1 100 ? C5D P4P 162 A 1 HETATM 17 C C4D P4P . . . D 4 -15.939 69.157 23.81 1 100 ? C4D P4P 162 A 1 HETATM 18 C C3D P4P . . . D 4 -15.373 69.232 25.084 1 90.91 ? C3D P4P 162 A 1 HETATM 19 C C2D P4P . . . D 4 -15.512 70.407 25.835 1 64.79 ? C2D P4P 162 A 1 HETATM 20 C C6B P4P . . . D 4 -18.87 71.954 26.641 1 100 ? C6B P4P 162 A 1 HETATM 21 C C5B P4P . . . D 4 -20.142 71.831 27.199 1 71.29 ? C5B P4P 162 A 1 HETATM 22 C C4B P4P . . . D 4 -20.589 72.785 28.104 1 61.83 ? C4B P4P 162 A 1 HETATM 23 C C3B P4P . . . D 4 -19.766 73.868 28.451 1 100 ? C3B P4P 162 A 1 HETATM 24 C C2B P4P . . . D 4 -18.483 73.988 27.885 1 67.56 ? C2B P4P 162 A 1 HETATM 25 C C1B P4P . . . D 4 -18.032 73.032 26.975 1 26.69 ? C1B P4P 162 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #