data_2BPW # _model_server_result.job_id bvmg6BRa3tBGfsnzMhQAnQ _model_server_result.datetime_utc '2024-11-12 22:18:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bpw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":902}' # _entry.id 2BPW # _exptl.entry_id 2BPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 621.81 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[2-HYDROXY-4-(2-HYDROXY-5-METHYL-CYCLOPENTYLCARBAMOYL)5-PHENYL-PENTYL]-4-(3-PYRIDIN-3-YL-PROPIONYL)-PIPERAZINE-2-CARB OXYLIC ACID TERT-BUTYLAMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BPW _cell.length_a 58.91 _cell.length_b 87.44 _cell.length_c 46.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C35 H51 N5 O5' _chem_comp.formula_weight 621.81 _chem_comp.id 1IN _chem_comp.mon_nstd_flag . _chem_comp.name '1-[2-HYDROXY-4-(2-HYDROXY-5-METHYL-CYCLOPENTYLCARBAMOYL)5-PHENYL-PENTYL]-4-(3-PYRIDIN-3-YL-PROPIONYL)-PIPERAZINE-2-CARB OXYLIC ACID TERT-BUTYLAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms L-738,317 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 1IN sing 1 n n C1 N1 1IN sing 2 n n C1 H11A 1IN sing 3 n n C1 H12 1IN sing 4 n n C2 C3 1IN sing 5 n n C2 N3 1IN sing 6 n n C2 H2 1IN sing 7 n n C3 O1 1IN doub 8 n n C3 N2 1IN sing 9 n n O4 C23 1IN sing 10 n n O4 HO4 1IN sing 11 n n O5 C31 1IN doub 12 n n C7 C4 1IN sing 13 n n C7 H71 1IN sing 14 n n C7 H72 1IN sing 15 n n C7 H73 1IN sing 16 n n C8 C9 1IN sing 17 n n C8 N3 1IN sing 18 n n C8 H81 1IN sing 19 n n C8 H82 1IN sing 20 n n C9 N1 1IN sing 21 n n C9 H91 1IN sing 22 n n C9 H92 1IN sing 23 n n C10 C11 1IN sing 24 n n C10 N3 1IN sing 25 n n C10 H101 1IN sing 26 n n C10 H102 1IN sing 27 n n C11 C12 1IN sing 28 n n C11 O2 1IN sing 29 n n C11 H11 1IN sing 30 n n C12 C13 1IN sing 31 n n C12 H121 1IN sing 32 n n C12 H122 1IN sing 33 n n C13 C14 1IN sing 34 n n C13 C21 1IN sing 35 n n C13 H13 1IN sing 36 n n C14 C15 1IN sing 37 n n C14 H141 1IN sing 38 n n C14 H142 1IN sing 39 n n C15 C16 1IN doub 40 n y C15 C20 1IN sing 41 n y C16 C17 1IN sing 42 n y C16 H16 1IN sing 43 n n C19 C20 1IN doub 44 n y C19 C18 1IN sing 45 n y C19 H19 1IN sing 46 n n C20 H20 1IN sing 47 n n C21 O3 1IN doub 48 n n C21 N4 1IN sing 49 n n C22 C30 1IN sing 50 n n C22 N4 1IN sing 51 n n C22 C23 1IN sing 52 n n C22 H22 1IN sing 53 n n C24 C23 1IN sing 54 n n C24 C25 1IN sing 55 n n C24 H241 1IN sing 56 n n C24 H242 1IN sing 57 n n C27 C26 1IN sing 58 n n C27 C28 1IN sing 59 n n C27 H271 1IN sing 60 n n C27 H272 1IN sing 61 n n C30 C25 1IN sing 62 n n C30 C29 1IN sing 63 n n C30 H30 1IN sing 64 n n C31 N1 1IN sing 65 n n C31 C26 1IN sing 66 n n C32 C33 1IN doub 67 n y C32 C28 1IN sing 68 n y C32 H32 1IN sing 69 n n C33 C34 1IN sing 70 n y C33 H33 1IN sing 71 n n C34 N5 1IN doub 72 n y C34 H34 1IN sing 73 n n C35 C28 1IN doub 74 n y C35 N5 1IN sing 75 n y C35 H35 1IN sing 76 n n N2 C4 1IN sing 77 n n N2 HN2 1IN sing 78 n n C4 C5 1IN sing 79 n n C4 C6 1IN sing 80 n n C5 H51 1IN sing 81 n n C5 H52 1IN sing 82 n n C5 H53 1IN sing 83 n n C6 H61 1IN sing 84 n n C6 H62 1IN sing 85 n n C6 H63 1IN sing 86 n n O2 HO2 1IN sing 87 n n C17 C18 1IN doub 88 n y C17 H17 1IN sing 89 n n C18 H18 1IN sing 90 n n N4 HN4 1IN sing 91 n n C23 H23 1IN sing 92 n n C25 H251 1IN sing 93 n n C25 H252 1IN sing 94 n n C29 H291 1IN sing 95 n n C29 H292 1IN sing 96 n n C29 H293 1IN sing 97 n n C26 H261 1IN sing 98 n n C26 H262 1IN sing 99 n n # _atom_sites.entry_id 2BPW _atom_sites.fract_transf_matrix[1][1] 0.016975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011436 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021363 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1IN B 1 902 902 1IN 1IN . D 3 HOH A 1 305 305 HOH HOH . D 3 HOH A 2 307 307 HOH HOH . D 3 HOH A 3 309 309 HOH HOH . D 3 HOH A 4 314 314 HOH HOH . D 3 HOH A 5 315 315 HOH HOH . D 3 HOH A 6 324 324 HOH HOH . D 3 HOH A 7 325 325 HOH HOH . D 3 HOH A 8 327 327 HOH HOH . D 3 HOH A 9 328 328 HOH HOH . D 3 HOH A 10 329 329 HOH HOH . D 3 HOH A 11 331 331 HOH HOH . D 3 HOH A 12 332 332 HOH HOH . D 3 HOH A 13 344 344 HOH HOH . D 3 HOH A 14 345 345 HOH HOH . D 3 HOH A 15 384 384 HOH HOH . D 3 HOH A 16 386 386 HOH HOH . D 3 HOH A 17 389 389 HOH HOH . D 3 HOH A 18 406 406 HOH HOH . D 3 HOH A 19 408 408 HOH HOH . D 3 HOH A 20 416 416 HOH HOH . D 3 HOH A 21 422 422 HOH HOH . D 3 HOH A 22 439 439 HOH HOH . D 3 HOH A 23 457 457 HOH HOH . D 3 HOH A 24 468 468 HOH HOH . D 3 HOH A 25 503 503 HOH HOH . D 3 HOH A 26 510 510 HOH HOH . D 3 HOH A 27 529 529 HOH HOH . D 3 HOH A 28 532 532 HOH HOH . D 3 HOH A 29 553 553 HOH HOH . D 3 HOH A 30 561 561 HOH HOH . D 3 HOH A 31 567 567 HOH HOH . D 3 HOH A 32 572 572 HOH HOH . D 3 HOH A 33 619 619 HOH HOH . E 3 HOH B 1 301 301 HOH HOH . E 3 HOH B 2 304 304 HOH HOH . E 3 HOH B 3 306 306 HOH HOH . E 3 HOH B 4 308 308 HOH HOH . E 3 HOH B 5 312 312 HOH HOH . E 3 HOH B 6 316 316 HOH HOH . E 3 HOH B 7 317 317 HOH HOH . E 3 HOH B 8 318 318 HOH HOH . E 3 HOH B 9 319 319 HOH HOH . E 3 HOH B 10 326 326 HOH HOH . E 3 HOH B 11 333 333 HOH HOH . E 3 HOH B 12 334 334 HOH HOH . E 3 HOH B 13 338 338 HOH HOH . E 3 HOH B 14 339 339 HOH HOH . E 3 HOH B 15 340 340 HOH HOH . E 3 HOH B 16 346 346 HOH HOH . E 3 HOH B 17 347 347 HOH HOH . E 3 HOH B 18 348 348 HOH HOH . E 3 HOH B 19 350 350 HOH HOH . E 3 HOH B 20 354 354 HOH HOH . E 3 HOH B 21 355 355 HOH HOH . E 3 HOH B 22 356 356 HOH HOH . E 3 HOH B 23 358 358 HOH HOH . E 3 HOH B 24 359 359 HOH HOH . E 3 HOH B 25 362 362 HOH HOH . E 3 HOH B 26 364 364 HOH HOH . E 3 HOH B 27 367 367 HOH HOH . E 3 HOH B 28 369 369 HOH HOH . E 3 HOH B 29 370 370 HOH HOH . E 3 HOH B 30 374 374 HOH HOH . E 3 HOH B 31 375 375 HOH HOH . E 3 HOH B 32 379 379 HOH HOH . E 3 HOH B 33 383 383 HOH HOH . E 3 HOH B 34 387 387 HOH HOH . E 3 HOH B 35 388 388 HOH HOH . E 3 HOH B 36 392 392 HOH HOH . E 3 HOH B 37 393 393 HOH HOH . E 3 HOH B 38 394 394 HOH HOH . E 3 HOH B 39 395 395 HOH HOH . E 3 HOH B 40 401 401 HOH HOH . E 3 HOH B 41 405 405 HOH HOH . E 3 HOH B 42 410 410 HOH HOH . E 3 HOH B 43 414 414 HOH HOH . E 3 HOH B 44 419 419 HOH HOH . E 3 HOH B 45 420 420 HOH HOH . E 3 HOH B 46 425 425 HOH HOH . E 3 HOH B 47 443 443 HOH HOH . E 3 HOH B 48 461 461 HOH HOH . E 3 HOH B 49 471 471 HOH HOH . E 3 HOH B 50 500 500 HOH HOH . E 3 HOH B 51 501 501 HOH HOH . E 3 HOH B 52 505 505 HOH HOH . E 3 HOH B 53 506 506 HOH HOH . E 3 HOH B 54 509 509 HOH HOH . E 3 HOH B 55 515 515 HOH HOH . E 3 HOH B 56 517 517 HOH HOH . E 3 HOH B 57 525 525 HOH HOH . E 3 HOH B 58 526 526 HOH HOH . E 3 HOH B 59 531 531 HOH HOH . E 3 HOH B 60 549 549 HOH HOH . E 3 HOH B 61 564 564 HOH HOH . E 3 HOH B 62 568 568 HOH HOH . E 3 HOH B 63 591 591 HOH HOH . E 3 HOH B 64 613 613 HOH HOH . E 3 HOH B 65 617 617 HOH HOH . E 3 HOH B 66 620 620 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1IN . . . C 2 9.094 24.222 4.211 1 14.4 ? C1 1IN 902 B 1 HETATM 2 C C2 1IN . . . C 2 10.318 25.055 4.638 1 12.47 ? C2 1IN 902 B 1 HETATM 3 C C3 1IN . . . C 2 10.373 25.131 6.165 1 12.35 ? C3 1IN 902 B 1 HETATM 4 O O4 1IN . . . C 2 18.556 19.859 4.755 1 6.09 ? O4 1IN 902 B 1 HETATM 5 O O5 1IN . . . C 2 7.931 24.686 0.792 1 17.8 ? O5 1IN 902 B 1 HETATM 6 C C7 1IN . . . C 2 8.762 25.326 8.747 1 6.35 ? C7 1IN 902 B 1 HETATM 7 C C8 1IN . . . C 2 11.449 24.355 2.601 1 15.68 ? C8 1IN 902 B 1 HETATM 8 C C9 1IN . . . C 2 10.218 23.589 2.141 1 13.52 ? C9 1IN 902 B 1 HETATM 9 C C10 1IN . . . C 2 12.765 25.234 4.514 1 8.09 ? C10 1IN 902 B 1 HETATM 10 C C11 1IN . . . C 2 13.901 24.211 4.682 1 6.5 ? C11 1IN 902 B 1 HETATM 11 C C12 1IN . . . C 2 14.111 23.796 6.146 1 3.06 ? C12 1IN 902 B 1 HETATM 12 C C13 1IN . . . C 2 15.251 22.811 6.451 1 2.53 ? C13 1IN 902 B 1 HETATM 13 C C14 1IN . . . C 2 15.383 22.664 7.967 1 2 ? C14 1IN 902 B 1 HETATM 14 C C15 1IN . . . C 2 16.479 21.742 8.421 1 4.5 ? C15 1IN 902 B 1 HETATM 15 C C16 1IN . . . C 2 17.806 21.969 8.056 1 9.34 ? C16 1IN 902 B 1 HETATM 16 C C19 1IN . . . C 2 17.165 19.922 9.864 1 4.02 ? C19 1IN 902 B 1 HETATM 17 C C20 1IN . . . C 2 16.159 20.704 9.295 1 5.59 ? C20 1IN 902 B 1 HETATM 18 C C21 1IN . . . C 2 15.016 21.453 5.78 1 5.83 ? C21 1IN 902 B 1 HETATM 19 C C22 1IN . . . C 2 16.2 19.439 4.931 1 4.71 ? C22 1IN 902 B 1 HETATM 20 C C24 1IN . . . C 2 17.623 17.705 4.218 1 5.29 ? C24 1IN 902 B 1 HETATM 21 C C27 1IN . . . C 2 5.498 25.175 2.072 1 26.93 ? C27 1IN 902 B 1 HETATM 22 C C30 1IN . . . C 2 15.662 18.973 3.545 1 2.91 ? C30 1IN 902 B 1 HETATM 23 C C31 1IN . . . C 2 7.988 24.675 2.021 1 18.75 ? C31 1IN 902 B 1 HETATM 24 C C32 1IN . . . C 2 3.062 24.857 2.185 1 33.25 ? C32 1IN 902 B 1 HETATM 25 C C33 1IN . . . C 2 1.868 24.822 2.911 1 36.32 ? C33 1IN 902 B 1 HETATM 26 C C34 1IN . . . C 2 1.954 24.998 4.296 1 39.25 ? C34 1IN 902 B 1 HETATM 27 C C35 1IN . . . C 2 4.271 25.216 4.219 1 36.94 ? C35 1IN 902 B 1 HETATM 28 N N1 1IN . . . C 2 9.041 24.199 2.743 1 13.71 ? N1 1IN 902 B 1 HETATM 29 O O1 1IN . . . C 2 10.95 24.243 6.802 1 12.14 ? O1 1IN 902 B 1 HETATM 30 N N2 1IN . . . C 2 9.762 26.224 6.7 1 8.76 ? N2 1IN 902 B 1 HETATM 31 C C4 1IN . . . C 2 9.642 26.437 8.138 1 8.51 ? C4 1IN 902 B 1 HETATM 32 C C5 1IN . . . C 2 8.979 27.804 8.396 1 3.99 ? C5 1IN 902 B 1 HETATM 33 C C6 1IN . . . C 2 11.031 26.443 8.806 1 8.65 ? C6 1IN 902 B 1 HETATM 34 N N3 1IN . . . C 2 11.57 24.504 4.061 1 13.86 ? N3 1IN 902 B 1 HETATM 35 O O2 1IN . . . C 2 15.113 24.801 4.233 1 2 ? O2 1IN 902 B 1 HETATM 36 C C17 1IN . . . C 2 18.824 21.199 8.627 1 10.71 ? C17 1IN 902 B 1 HETATM 37 C C18 1IN . . . C 2 18.503 20.188 9.546 1 8.34 ? C18 1IN 902 B 1 HETATM 38 O O3 1IN . . . C 2 13.886 20.977 5.705 1 7.45 ? O3 1IN 902 B 1 HETATM 39 N N4 1IN . . . C 2 16.133 20.876 5.278 1 3.16 ? N4 1IN 902 B 1 HETATM 40 C C23 1IN . . . C 2 17.617 18.882 5.197 1 5.09 ? C23 1IN 902 B 1 HETATM 41 C C25 1IN . . . C 2 16.814 18.111 3.032 1 2 ? C25 1IN 902 B 1 HETATM 42 C C29 1IN . . . C 2 15.429 20.131 2.606 1 8.86 ? C29 1IN 902 B 1 HETATM 43 C C26 1IN . . . C 2 6.809 25.211 2.732 1 22.08 ? C26 1IN 902 B 1 HETATM 44 C C28 1IN . . . C 2 4.272 25.062 2.836 1 31.74 ? C28 1IN 902 B 1 HETATM 45 N N5 1IN . . . C 2 3.132 25.181 4.89 1 42.04 ? N5 1IN 902 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 45 #