data_2BQ6
#
_model_server_result.job_id            RBeSaxhu4Zj0X_sUh4MRZA 
_model_server_result.datetime_utc      '2024-12-21 12:39:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bq6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1246}' 
#
_entry.id    2BQ6 
#
_exptl.entry_id    2BQ6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              522.062 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-{[5-(5-CHLORO-2-THIENYL)ISOXAZOL-3-YL]METHYL}-3-CYANO-N-(1-ISOPROPYLPIPERIDIN-4-YL)-7-METHYL-1H-INDOLE-2-CARBOXAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BQ6 
_cell.length_a            55.4 
_cell.length_b            70.65 
_cell.length_c            76.27 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BQ6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 1 1_555 A SG CYS 15 A CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 11 A CYS 8 1_555 A SG CYS 24 A CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
disulf ? disulf3 A SG CYS 26 A CYS 23 1_555 A SG CYS 39 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf4 A SG CYS 47 A CYS 44 1_555 B SG CYS 123 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 B SG CYS 22 B CYS 22 1_555 B SG CYS 27 B CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 B SG CYS 42 B CYS 42 1_555 B SG CYS 58 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf7 B SG CYS 171 B CYS 168 1_555 B SG CYS 185 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf8 B SG CYS 196 B CYS 191 1_555 B SG CYS 224 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 B OD1 ASP 71 B ASP 70 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? 
metalc ? metalc2 B O ASN 73 B ASN 72 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? 
metalc ? metalc3 B O GLN 76 B GLN 75 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? 
metalc ? metalc4 B N GLU 77 B GLU 76 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.367 ? 
metalc ? metalc5 B OE2 GLU 78 B GLU 77 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.288 ? 
#
_chem_comp.formula           'C27 H28 Cl N5 O2 S' 
_chem_comp.formula_weight    522.062 
_chem_comp.id                IIB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-{[5-(5-CHLORO-2-THIENYL)ISOXAZOL-3-YL]METHYL}-3-CYANO-N-(1-ISOPROPYLPIPERIDIN-4-YL)-7-METHYL-1H-INDOLE-2-CARBOXAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '1-[5-(5-CHLORO-THIOPHEN-2-YL)-ISOXAZOL-3-YLMETHYL]-3-CYANO-7-METHYL-1H-INDOLE-2-CARBOXYLIC ACID (1-ISOPROPYL-PIPERIDIN-4-YL)-AMIDE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IIB doub 152 n y 
C1 C6 IIB sing 153 n y 
C1 H1 IIB sing 154 n n 
C2 C3 IIB sing 155 n y 
C2 C11 IIB sing 156 n n 
C3 C4 IIB doub 157 n y 
C3 N7 IIB sing 158 n y 
C4 C5 IIB sing 159 n y 
C4 C9 IIB sing 160 n y 
C5 C6 IIB doub 161 n y 
C5 H5 IIB sing 162 n n 
C6 H6 IIB sing 163 n n 
N7 C8 IIB sing 164 n y 
N7 C37 IIB sing 165 n n 
C8 C9 IIB doub 166 n y 
C8 C10 IIB sing 167 n n 
C9 C7 IIB sing 168 n n 
C10 N11 IIB sing 169 n n 
C10 O56 IIB doub 170 n n 
N11 C12 IIB sing 171 n n 
N11 H11 IIB sing 172 n n 
C12 C13 IIB sing 173 n n 
C12 C17 IIB sing 174 n n 
C12 H12 IIB sing 175 n n 
C13 C14 IIB sing 176 n n 
C13 H131 IIB sing 177 n n 
C13 H132 IIB sing 178 n n 
C14 N15 IIB sing 179 n n 
C14 H141 IIB sing 180 n n 
C14 H142 IIB sing 181 n n 
N15 C16 IIB sing 182 n n 
N15 C27 IIB sing 183 n n 
C16 C17 IIB sing 184 n n 
C16 H161 IIB sing 185 n n 
C16 H162 IIB sing 186 n n 
C17 H171 IIB sing 187 n n 
C17 H172 IIB sing 188 n n 
C27 C28 IIB sing 189 n n 
C27 C32 IIB sing 190 n n 
C27 H27 IIB sing 191 n n 
C28 H281 IIB sing 192 n n 
C28 H282 IIB sing 193 n n 
C28 H283 IIB sing 194 n n 
C32 H321 IIB sing 195 n n 
C32 H322 IIB sing 196 n n 
C32 H323 IIB sing 197 n n 
C37 C38 IIB sing 198 n n 
C37 H371 IIB sing 199 n n 
C37 H372 IIB sing 200 n n 
C38 N41 IIB doub 201 n y 
C38 C44 IIB sing 202 n y 
N41 O42 IIB sing 203 n y 
O42 C43 IIB sing 204 n y 
C43 C44 IIB doub 205 n y 
C43 C45 IIB sing 206 n y 
C44 H44 IIB sing 207 n n 
C45 S46 IIB sing 208 n y 
C45 C49 IIB doub 209 n y 
S46 C47 IIB sing 210 n y 
C47 C48 IIB doub 211 n y 
C47 CL50 IIB sing 212 n n 
C48 C49 IIB sing 213 n y 
C48 H48 IIB sing 214 n n 
C49 H49 IIB sing 215 n n 
C7 N1 IIB trip 216 n n 
C11 H111 IIB sing 217 n n 
C11 H112 IIB sing 218 n n 
C11 H113 IIB sing 219 n n 
#
_atom_sites.entry_id                     2BQ6 
_atom_sites.fract_transf_matrix[1][1]    0.018051 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014154 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013111 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CA B 1 1245 1245 CA CA . 
D 4 IIB B 1 1246 1246 IIB IIB . 
E 5 HOH A 1 2001 2001 HOH HOH . 
E 5 HOH A 2 2002 2002 HOH HOH . 
E 5 HOH A 3 2003 2003 HOH HOH . 
E 5 HOH A 4 2004 2004 HOH HOH . 
E 5 HOH A 5 2005 2005 HOH HOH . 
E 5 HOH A 6 2006 2006 HOH HOH . 
E 5 HOH A 7 2007 2007 HOH HOH . 
E 5 HOH A 8 2008 2008 HOH HOH . 
E 5 HOH A 9 2009 2009 HOH HOH . 
E 5 HOH A 10 2010 2010 HOH HOH . 
E 5 HOH A 11 2011 2011 HOH HOH . 
E 5 HOH A 12 2012 2012 HOH HOH . 
E 5 HOH A 13 2013 2013 HOH HOH . 
E 5 HOH A 14 2014 2014 HOH HOH . 
E 5 HOH A 15 2015 2015 HOH HOH . 
E 5 HOH A 16 2016 2016 HOH HOH . 
F 5 HOH B 1 2001 2001 HOH HOH . 
F 5 HOH B 2 2002 2002 HOH HOH . 
F 5 HOH B 3 2003 2003 HOH HOH . 
F 5 HOH B 4 2004 2004 HOH HOH . 
F 5 HOH B 5 2005 2005 HOH HOH . 
F 5 HOH B 6 2006 2006 HOH HOH . 
F 5 HOH B 7 2007 2007 HOH HOH . 
F 5 HOH B 8 2008 2008 HOH HOH . 
F 5 HOH B 9 2009 2009 HOH HOH . 
F 5 HOH B 10 2010 2010 HOH HOH . 
F 5 HOH B 11 2011 2011 HOH HOH . 
F 5 HOH B 12 2012 2012 HOH HOH . 
F 5 HOH B 13 2013 2013 HOH HOH . 
F 5 HOH B 14 2014 2014 HOH HOH . 
F 5 HOH B 15 2015 2015 HOH HOH . 
F 5 HOH B 16 2016 2016 HOH HOH . 
F 5 HOH B 17 2017 2017 HOH HOH . 
F 5 HOH B 18 2018 2018 HOH HOH . 
F 5 HOH B 19 2019 2019 HOH HOH . 
F 5 HOH B 20 2020 2020 HOH HOH . 
F 5 HOH B 21 2021 2021 HOH HOH . 
F 5 HOH B 22 2022 2022 HOH HOH . 
F 5 HOH B 23 2023 2023 HOH HOH . 
F 5 HOH B 24 2024 2024 HOH HOH . 
F 5 HOH B 25 2025 2025 HOH HOH . 
F 5 HOH B 26 2026 2026 HOH HOH . 
F 5 HOH B 27 2027 2027 HOH HOH . 
F 5 HOH B 28 2028 2028 HOH HOH . 
F 5 HOH B 29 2029 2029 HOH HOH . 
F 5 HOH B 30 2030 2030 HOH HOH . 
F 5 HOH B 31 2031 2031 HOH HOH . 
F 5 HOH B 32 2032 2032 HOH HOH . 
F 5 HOH B 33 2033 2033 HOH HOH . 
F 5 HOH B 34 2034 2034 HOH HOH . 
F 5 HOH B 35 2035 2035 HOH HOH . 
F 5 HOH B 36 2036 2036 HOH HOH . 
F 5 HOH B 37 2037 2037 HOH HOH . 
F 5 HOH B 38 2038 2038 HOH HOH . 
F 5 HOH B 39 2039 2039 HOH HOH . 
F 5 HOH B 40 2040 2040 HOH HOH . 
F 5 HOH B 41 2041 2041 HOH HOH . 
F 5 HOH B 42 2042 2042 HOH HOH . 
F 5 HOH B 43 2043 2043 HOH HOH . 
F 5 HOH B 44 2044 2044 HOH HOH . 
F 5 HOH B 45 2045 2045 HOH HOH . 
F 5 HOH B 46 2046 2046 HOH HOH . 
F 5 HOH B 47 2047 2047 HOH HOH . 
F 5 HOH B 48 2048 2048 HOH HOH . 
F 5 HOH B 49 2049 2049 HOH HOH . 
F 5 HOH B 50 2050 2050 HOH HOH . 
F 5 HOH B 51 2051 2051 HOH HOH . 
F 5 HOH B 52 2052 2052 HOH HOH . 
F 5 HOH B 53 2053 2053 HOH HOH . 
F 5 HOH B 54 2054 2054 HOH HOH . 
F 5 HOH B 55 2055 2055 HOH HOH . 
F 5 HOH B 56 2056 2056 HOH HOH . 
F 5 HOH B 57 2057 2057 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IIB . . . D 4 1.483 7.445 25.188 1 67.05 ? C1 IIB 1246 B 1 
HETATM 2 C C2 IIB . . . D 4 2.601 7.734 24.334 1 66.76 ? C2 IIB 1246 B 1 
HETATM 3 C C3 IIB . . . D 4 3.28 6.672 23.618 1 66.1 ? C3 IIB 1246 B 1 
HETATM 4 C C4 IIB . . . D 4 2.786 5.315 23.801 1 66.74 ? C4 IIB 1246 B 1 
HETATM 5 C C5 IIB . . . D 4 1.664 5.054 24.663 1 66.74 ? C5 IIB 1246 B 1 
HETATM 6 C C6 IIB . . . D 4 1.013 6.109 25.355 1 66.95 ? C6 IIB 1246 B 1 
HETATM 7 N N7 IIB . . . D 4 4.39 6.56 22.705 1 64.87 ? N7 IIB 1246 B 1 
HETATM 8 C C8 IIB . . . D 4 4.605 5.209 22.33 1 66.26 ? C8 IIB 1246 B 1 
HETATM 9 C C9 IIB . . . D 4 3.61 4.452 23.004 1 66.59 ? C9 IIB 1246 B 1 
HETATM 10 C C10 IIB . . . D 4 5.62 4.702 21.455 1 67.31 ? C10 IIB 1246 B 1 
HETATM 11 N N11 IIB . . . D 4 5.28 3.771 20.539 1 68.43 ? N11 IIB 1246 B 1 
HETATM 12 C C12 IIB . . . D 4 6.271 3.009 19.773 1 69.36 ? C12 IIB 1246 B 1 
HETATM 13 C C13 IIB . . . D 4 6.024 1.5 19.873 1 69.58 ? C13 IIB 1246 B 1 
HETATM 14 C C14 IIB . . . D 4 7.101 0.746 19.044 1 70.6 ? C14 IIB 1246 B 1 
HETATM 15 N N15 IIB . . . D 4 7.184 1.264 17.626 1 71 ? N15 IIB 1246 B 1 
HETATM 16 C C16 IIB . . . D 4 7.44 2.722 17.537 1 70.7 ? C16 IIB 1246 B 1 
HETATM 17 C C17 IIB . . . D 4 6.328 3.477 18.298 1 70.07 ? C17 IIB 1246 B 1 
HETATM 18 C C27 IIB . . . D 4 8.152 0.571 16.693 1 71.23 ? C27 IIB 1246 B 1 
HETATM 19 C C28 IIB . . . D 4 7.35 0.062 15.497 1 71.5 ? C28 IIB 1246 B 1 
HETATM 20 C C32 IIB . . . D 4 8.931 -0.6 17.348 1 71.72 ? C32 IIB 1246 B 1 
HETATM 21 C C37 IIB . . . D 4 5.215 7.72 22.214 1 60.57 ? C37 IIB 1246 B 1 
HETATM 22 C C38 IIB . . . D 4 6.576 7.899 22.839 1 56.47 ? C38 IIB 1246 B 1 
HETATM 23 N N41 IIB . . . D 4 7.424 8.878 22.414 1 55.04 ? N41 IIB 1246 B 1 
HETATM 24 O O42 IIB . . . D 4 8.5 8.762 23.129 1 53.78 ? O42 IIB 1246 B 1 
HETATM 25 C C43 IIB . . . D 4 8.37 7.744 24 1 51.86 ? C43 IIB 1246 B 1 
HETATM 26 C C44 IIB . . . D 4 7.139 7.132 23.87 1 53.98 ? C44 IIB 1246 B 1 
HETATM 27 C C45 IIB . . . D 4 9.412 7.304 24.957 1 49.33 ? C45 IIB 1246 B 1 
HETATM 28 S S46 IIB . . . D 4 11.036 7.527 24.611 1 46.51 ? S46 IIB 1246 B 1 
HETATM 29 C C47 IIB . . . D 4 11.448 6.772 26.06 1 46.87 ? C47 IIB 1246 B 1 
HETATM 30 C C48 IIB . . . D 4 10.352 6.344 26.841 1 46.94 ? C48 IIB 1246 B 1 
HETATM 31 C C49 IIB . . . D 4 9.131 6.658 26.187 1 48.09 ? C49 IIB 1246 B 1 
HETATM 32 CL CL50 IIB . . . D 4 13.088 6.554 26.487 1 46.95 ? CL50 IIB 1246 B 1 
HETATM 33 O O56 IIB . . . D 4 6.784 5.073 21.573 1 66.78 ? O56 IIB 1246 B 1 
HETATM 34 C C7 IIB . . . D 4 3.394 3.014 22.948 1 66.25 ? C7 IIB 1246 B 1 
HETATM 35 N N1 IIB . . . D 4 3.185 1.889 22.885 1 66.13 ? N1 IIB 1246 B 1 
HETATM 36 C C11 IIB . . . D 4 2.949 9.174 24.289 1 66.61 ? C11 IIB 1246 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           513 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           36 
#