data_2BQW # _model_server_result.job_id XVcDFMoKOlvKiDC6dqBTwg _model_server_result.datetime_utc '2024-12-21 14:01:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bqw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1246}' # _entry.id 2BQW # _exptl.entry_id 2BQW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 452.976 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{2-[(4-CHLOROPHENYL)AMINO]-2-OXOETHYL}-N-(1-ISOPROPYLPIPERIDIN-4-YL)-1H-INDOLE-2-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BQW _cell.length_a 56.38 _cell.length_b 71.9 _cell.length_c 78.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BQW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 1 1_555 A SG CYS 15 A CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 11 A CYS 8 1_555 A SG CYS 24 A CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 A SG CYS 26 A CYS 23 1_555 A SG CYS 39 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 47 A CYS 44 1_555 B SG CYS 123 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 B SG CYS 22 B CYS 22 1_555 B SG CYS 27 B CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 42 B CYS 42 1_555 B SG CYS 58 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 B SG CYS 171 B CYS 168 1_555 B SG CYS 185 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf8 B SG CYS 196 B CYS 191 1_555 B SG CYS 224 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 B OD1 ASP 71 B ASP 70 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc2 B O ASN 73 B ASN 72 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc3 B O GLN 76 B GLN 75 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc4 B OE2 GLU 81 B GLU 80 1_555 C CA CA . B CA 1245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.009 ? metalc ? metalc5 C CA CA . B CA 1245 1_555 F O HOH . B HOH 2017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc6 C CA CA . B CA 1245 1_555 F O HOH . B HOH 2018 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.012 ? metalc ? metalc7 C CA CA . B CA 1245 1_555 F O HOH . B HOH 2023 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.184 ? # _chem_comp.formula 'C25 H29 Cl N4 O2' _chem_comp.formula_weight 452.976 _chem_comp.id IIE _chem_comp.mon_nstd_flag . _chem_comp.name 1-{2-[(4-CHLOROPHENYL)AMINO]-2-OXOETHYL}-N-(1-ISOPROPYLPIPERIDIN-4-YL)-1H-INDOLE-2-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IIE doub 152 n y C1 C6 IIE sing 153 n y C1 H1 IIE sing 154 n n C2 C3 IIE sing 155 n y C2 H2 IIE sing 156 n n C3 C4 IIE doub 157 n y C3 N7 IIE sing 158 n y C4 C5 IIE sing 159 n y C4 C9 IIE sing 160 n y C5 C6 IIE doub 161 n y C5 H5 IIE sing 162 n n C6 H6 IIE sing 163 n n N7 C8 IIE sing 164 n y N7 C37 IIE sing 165 n n C8 C9 IIE doub 166 n y C8 C10 IIE sing 167 n n C9 H9 IIE sing 168 n n C10 N11 IIE sing 169 n n C10 O56 IIE doub 170 n n N11 C12 IIE sing 171 n n N11 H11 IIE sing 172 n n C12 C13 IIE sing 173 n n C12 C17 IIE sing 174 n n C12 H12 IIE sing 175 n n C13 C14 IIE sing 176 n n C13 H131 IIE sing 177 n n C13 H132 IIE sing 178 n n C14 N15 IIE sing 179 n n C14 H141 IIE sing 180 n n C14 H142 IIE sing 181 n n N15 C16 IIE sing 182 n n N15 C27 IIE sing 183 n n C16 C17 IIE sing 184 n n C16 H161 IIE sing 185 n n C16 H162 IIE sing 186 n n C17 H171 IIE sing 187 n n C17 H172 IIE sing 188 n n C27 C28 IIE sing 189 n n C27 C32 IIE sing 190 n n C27 H27 IIE sing 191 n n C28 H281 IIE sing 192 n n C28 H282 IIE sing 193 n n C28 H283 IIE sing 194 n n C32 H321 IIE sing 195 n n C32 H322 IIE sing 196 n n C32 H323 IIE sing 197 n n C37 C38 IIE sing 198 n n C37 H371 IIE sing 199 n n C37 H372 IIE sing 200 n n C38 N12 IIE sing 201 n n C38 O14 IIE doub 202 n n C43 C40 IIE sing 203 n y C43 C45 IIE doub 204 n y C43 H43 IIE sing 205 n n C40 C47 IIE doub 206 n y C40 H40 IIE sing 207 n n C45 C49 IIE sing 208 n y C45 N12 IIE sing 209 n n C47 C48 IIE sing 210 n y C47 CL50 IIE sing 211 n n C48 C49 IIE doub 212 n y C48 H48 IIE sing 213 n n C49 H49 IIE sing 214 n n N12 HA IIE sing 215 n n # _atom_sites.entry_id 2BQW _atom_sites.fract_transf_matrix[1][1] 0.017737 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA B 1 1245 1245 CA CA . D 4 IIE B 1 1246 1246 IIE IIE . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . E 5 HOH A 31 2031 2031 HOH HOH . E 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH B 1 2001 2001 HOH HOH . F 5 HOH B 2 2002 2002 HOH HOH . F 5 HOH B 3 2003 2003 HOH HOH . F 5 HOH B 4 2004 2004 HOH HOH . F 5 HOH B 5 2005 2005 HOH HOH . F 5 HOH B 6 2006 2006 HOH HOH . F 5 HOH B 7 2007 2007 HOH HOH . F 5 HOH B 8 2008 2008 HOH HOH . F 5 HOH B 9 2009 2009 HOH HOH . F 5 HOH B 10 2010 2010 HOH HOH . F 5 HOH B 11 2011 2011 HOH HOH . F 5 HOH B 12 2012 2012 HOH HOH . F 5 HOH B 13 2013 2013 HOH HOH . F 5 HOH B 14 2014 2014 HOH HOH . F 5 HOH B 15 2015 2015 HOH HOH . F 5 HOH B 16 2016 2016 HOH HOH . F 5 HOH B 17 2017 2017 HOH HOH . F 5 HOH B 18 2018 2018 HOH HOH . F 5 HOH B 19 2019 2019 HOH HOH . F 5 HOH B 20 2020 2020 HOH HOH . F 5 HOH B 21 2021 2021 HOH HOH . F 5 HOH B 22 2022 2022 HOH HOH . F 5 HOH B 23 2023 2023 HOH HOH . F 5 HOH B 24 2024 2024 HOH HOH . F 5 HOH B 25 2025 2025 HOH HOH . F 5 HOH B 26 2026 2026 HOH HOH . F 5 HOH B 27 2027 2027 HOH HOH . F 5 HOH B 28 2028 2028 HOH HOH . F 5 HOH B 29 2029 2029 HOH HOH . F 5 HOH B 30 2030 2030 HOH HOH . F 5 HOH B 31 2031 2031 HOH HOH . F 5 HOH B 32 2032 2032 HOH HOH . F 5 HOH B 33 2033 2033 HOH HOH . F 5 HOH B 34 2034 2034 HOH HOH . F 5 HOH B 35 2035 2035 HOH HOH . F 5 HOH B 36 2036 2036 HOH HOH . F 5 HOH B 37 2037 2037 HOH HOH . F 5 HOH B 38 2038 2038 HOH HOH . F 5 HOH B 39 2039 2039 HOH HOH . F 5 HOH B 40 2040 2040 HOH HOH . F 5 HOH B 41 2041 2041 HOH HOH . F 5 HOH B 42 2042 2042 HOH HOH . F 5 HOH B 43 2043 2043 HOH HOH . F 5 HOH B 44 2044 2044 HOH HOH . F 5 HOH B 45 2045 2045 HOH HOH . F 5 HOH B 46 2046 2046 HOH HOH . F 5 HOH B 47 2047 2047 HOH HOH . F 5 HOH B 48 2048 2048 HOH HOH . F 5 HOH B 49 2049 2049 HOH HOH . F 5 HOH B 50 2050 2050 HOH HOH . F 5 HOH B 51 2051 2051 HOH HOH . F 5 HOH B 52 2052 2052 HOH HOH . F 5 HOH B 53 2053 2053 HOH HOH . F 5 HOH B 54 2054 2054 HOH HOH . F 5 HOH B 55 2055 2055 HOH HOH . F 5 HOH B 56 2056 2056 HOH HOH . F 5 HOH B 57 2057 2057 HOH HOH . F 5 HOH B 58 2058 2058 HOH HOH . F 5 HOH B 59 2059 2059 HOH HOH . F 5 HOH B 60 2060 2060 HOH HOH . F 5 HOH B 61 2061 2061 HOH HOH . F 5 HOH B 62 2062 2062 HOH HOH . F 5 HOH B 63 2063 2063 HOH HOH . F 5 HOH B 64 2064 2064 HOH HOH . F 5 HOH B 65 2065 2065 HOH HOH . F 5 HOH B 66 2066 2066 HOH HOH . F 5 HOH B 67 2067 2067 HOH HOH . F 5 HOH B 68 2068 2068 HOH HOH . F 5 HOH B 69 2069 2069 HOH HOH . F 5 HOH B 70 2070 2070 HOH HOH . F 5 HOH B 71 2071 2071 HOH HOH . F 5 HOH B 72 2072 2072 HOH HOH . F 5 HOH B 73 2073 2073 HOH HOH . F 5 HOH B 74 2074 2074 HOH HOH . F 5 HOH B 75 2075 2075 HOH HOH . F 5 HOH B 76 2076 2076 HOH HOH . F 5 HOH B 77 2077 2077 HOH HOH . F 5 HOH B 78 2078 2078 HOH HOH . F 5 HOH B 79 2079 2079 HOH HOH . F 5 HOH B 80 2080 2080 HOH HOH . F 5 HOH B 81 2081 2081 HOH HOH . F 5 HOH B 82 2082 2082 HOH HOH . F 5 HOH B 83 2083 2083 HOH HOH . F 5 HOH B 84 2084 2084 HOH HOH . F 5 HOH B 85 2085 2085 HOH HOH . F 5 HOH B 86 2086 2086 HOH HOH . F 5 HOH B 87 2087 2087 HOH HOH . F 5 HOH B 88 2088 2088 HOH HOH . F 5 HOH B 89 2089 2089 HOH HOH . F 5 HOH B 90 2090 2090 HOH HOH . F 5 HOH B 91 2091 2091 HOH HOH . F 5 HOH B 92 2092 2092 HOH HOH . F 5 HOH B 93 2093 2093 HOH HOH . F 5 HOH B 94 2094 2094 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IIE . . . D 4 3.308 10.315 25.119 1 25.25 ? C1 IIE 1246 B 1 HETATM 2 C C2 IIE . . . D 4 4.361 9.295 25.187 1 25.51 ? C2 IIE 1246 B 1 HETATM 3 C C3 IIE . . . D 4 4.834 8.655 23.931 1 25.57 ? C3 IIE 1246 B 1 HETATM 4 C C4 IIE . . . D 4 4.264 9.033 22.63 1 23.61 ? C4 IIE 1246 B 1 HETATM 5 C C5 IIE . . . D 4 3.235 10.065 22.588 1 23.35 ? C5 IIE 1246 B 1 HETATM 6 C C6 IIE . . . D 4 2.749 10.704 23.814 1 23.71 ? C6 IIE 1246 B 1 HETATM 7 N N7 IIE . . . D 4 5.761 7.669 23.663 1 26.01 ? N7 IIE 1246 B 1 HETATM 8 C C8 IIE . . . D 4 5.798 7.441 22.359 1 23.96 ? C8 IIE 1246 B 1 HETATM 9 C C9 IIE . . . D 4 4.891 8.239 21.671 1 24.01 ? C9 IIE 1246 B 1 HETATM 10 C C10 IIE . . . D 4 6.73 6.669 21.731 1 23.85 ? C10 IIE 1246 B 1 HETATM 11 N N11 IIE . . . D 4 6.279 5.931 20.706 1 22.23 ? N11 IIE 1246 B 1 HETATM 12 C C12 IIE . . . D 4 7.249 4.975 20.193 1 21.62 ? C12 IIE 1246 B 1 HETATM 13 C C13 IIE . . . D 4 6.614 3.592 20.328 1 21.36 ? C13 IIE 1246 B 1 HETATM 14 C C14 IIE . . . D 4 7.496 2.535 19.699 1 21.46 ? C14 IIE 1246 B 1 HETATM 15 N N15 IIE . . . D 4 7.735 2.891 18.277 1 22.11 ? N15 IIE 1246 B 1 HETATM 16 C C16 IIE . . . D 4 8.467 4.186 18.162 1 20.74 ? C16 IIE 1246 B 1 HETATM 17 C C17 IIE . . . D 4 7.578 5.282 18.728 1 21.54 ? C17 IIE 1246 B 1 HETATM 18 C C27 IIE . . . D 4 8.345 1.711 17.608 1 22.37 ? C27 IIE 1246 B 1 HETATM 19 C C28 IIE . . . D 4 9.714 1.305 18.22 1 22.53 ? C28 IIE 1246 B 1 HETATM 20 C C32 IIE . . . D 4 8.493 2.022 16.124 1 22.33 ? C32 IIE 1246 B 1 HETATM 21 C C37 IIE . . . D 4 6.594 7.03 24.677 1 27.46 ? C37 IIE 1246 B 1 HETATM 22 C C38 IIE . . . D 4 7.729 7.992 24.944 1 28.95 ? C38 IIE 1246 B 1 HETATM 23 C C43 IIE . . . D 4 10.343 7.157 27.41 1 26.19 ? C43 IIE 1246 B 1 HETATM 24 C C40 IIE . . . D 4 11.785 7.14 27.625 1 26.04 ? C40 IIE 1246 B 1 HETATM 25 C C45 IIE . . . D 4 9.77 7.655 26.167 1 26.43 ? C45 IIE 1246 B 1 HETATM 26 C C47 IIE . . . D 4 12.666 7.615 26.57 1 26.82 ? C47 IIE 1246 B 1 HETATM 27 C C48 IIE . . . D 4 12.1 8.134 25.329 1 25.91 ? C48 IIE 1246 B 1 HETATM 28 C C49 IIE . . . D 4 10.668 8.152 25.131 1 25.13 ? C49 IIE 1246 B 1 HETATM 29 N N12 IIE . . . D 4 8.427 7.568 26.017 1 28.72 ? N12 IIE 1246 B 1 HETATM 30 O O14 IIE . . . D 4 7.942 8.977 24.228 1 30.49 ? O14 IIE 1246 B 1 HETATM 31 CL CL50 IIE . . . D 4 14.336 7.5 26.728 1 30.22 ? CL50 IIE 1246 B 1 HETATM 32 O O56 IIE . . . D 4 7.9 6.695 22.132 1 23.65 ? O56 IIE 1246 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 32 #