data_2BR7 # _model_server_result.job_id IREB3UQGikZdxci_JS0s2g _model_server_result.datetime_utc '2024-11-26 23:56:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2br7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1206}' # _entry.id 2BR7 # _exptl.entry_id 2BR7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BR7 _cell.length_a 204.203 _cell.length_b 204.203 _cell.length_c 204.203 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BR7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 125 A CYS 125 1_555 A SG CYS 138 A CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf2 A SG CYS 188 A CYS 188 1_555 A SG CYS 189 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 B SG CYS 125 B CYS 125 1_555 B SG CYS 138 B CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 B SG CYS 188 B CYS 188 1_555 B SG CYS 189 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf5 C SG CYS 125 C CYS 125 1_555 C SG CYS 138 C CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf6 C SG CYS 188 C CYS 188 1_555 C SG CYS 189 C CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf7 D SG CYS 125 D CYS 125 1_555 D SG CYS 138 D CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 D SG CYS 188 D CYS 188 1_555 D SG CYS 189 D CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf9 E SG CYS 125 E CYS 125 1_555 E SG CYS 138 E CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf10 E SG CYS 188 E CYS 188 1_555 E SG CYS 189 E CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 2BR7 _atom_sites.fract_transf_matrix[1][1] 0.004897 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004897 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 EPE A 1 1206 1206 EPE EPE . G 2 EPE B 1 1206 1206 EPE EPE . H 2 EPE C 1 1206 1206 EPE EPE . I 2 EPE D 1 1206 1206 EPE EPE . J 3 HOH A 1 2001 2001 HOH HOH . J 3 HOH A 2 2002 2002 HOH HOH . J 3 HOH A 3 2003 2003 HOH HOH . J 3 HOH A 4 2004 2004 HOH HOH . J 3 HOH A 5 2005 2005 HOH HOH . J 3 HOH A 6 2006 2006 HOH HOH . K 3 HOH B 1 2001 2001 HOH HOH . K 3 HOH B 2 2002 2002 HOH HOH . K 3 HOH B 3 2003 2003 HOH HOH . K 3 HOH B 4 2004 2004 HOH HOH . K 3 HOH B 5 2005 2005 HOH HOH . K 3 HOH B 6 2006 2006 HOH HOH . K 3 HOH B 7 2007 2007 HOH HOH . K 3 HOH B 8 2008 2008 HOH HOH . K 3 HOH B 9 2009 2009 HOH HOH . K 3 HOH B 10 2010 2010 HOH HOH . K 3 HOH B 11 2011 2011 HOH HOH . K 3 HOH B 12 2012 2012 HOH HOH . L 3 HOH C 1 2001 2001 HOH HOH . L 3 HOH C 2 2002 2002 HOH HOH . L 3 HOH C 3 2003 2003 HOH HOH . L 3 HOH C 4 2004 2004 HOH HOH . L 3 HOH C 5 2005 2005 HOH HOH . L 3 HOH C 6 2006 2006 HOH HOH . L 3 HOH C 7 2007 2007 HOH HOH . L 3 HOH C 8 2008 2008 HOH HOH . L 3 HOH C 9 2009 2009 HOH HOH . M 3 HOH D 1 2001 2001 HOH HOH . M 3 HOH D 2 2002 2002 HOH HOH . M 3 HOH D 3 2003 2003 HOH HOH . M 3 HOH D 4 2004 2004 HOH HOH . M 3 HOH D 5 2005 2005 HOH HOH . M 3 HOH D 6 2006 2006 HOH HOH . M 3 HOH D 7 2007 2007 HOH HOH . M 3 HOH D 8 2008 2008 HOH HOH . M 3 HOH D 9 2009 2009 HOH HOH . M 3 HOH D 10 2010 2010 HOH HOH . N 3 HOH E 1 2001 2001 HOH HOH . N 3 HOH E 2 2002 2002 HOH HOH . N 3 HOH E 3 2003 2003 HOH HOH . N 3 HOH E 4 2004 2004 HOH HOH . N 3 HOH E 5 2005 2005 HOH HOH . N 3 HOH E 6 2006 2006 HOH HOH . N 3 HOH E 7 2007 2007 HOH HOH . N 3 HOH E 8 2008 2008 HOH HOH . N 3 HOH E 9 2009 2009 HOH HOH . N 3 HOH E 10 2010 2010 HOH HOH . N 3 HOH E 11 2011 2011 HOH HOH . N 3 HOH E 12 2012 2012 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . H 2 -90.684 -57.488 -56.371 1 89.46 ? N1 EPE 1206 C 1 HETATM 2 C C2 EPE . . . H 2 -90.285 -57.708 -57.762 1 88.16 ? C2 EPE 1206 C 1 HETATM 3 C C3 EPE . . . H 2 -91.207 -56.846 -58.617 1 86.87 ? C3 EPE 1206 C 1 HETATM 4 N N4 EPE . . . H 2 -92.584 -56.965 -58.129 1 86.19 ? N4 EPE 1206 C 1 HETATM 5 C C5 EPE . . . H 2 -92.975 -57.062 -56.719 1 87.29 ? C5 EPE 1206 C 1 HETATM 6 C C6 EPE . . . H 2 -92.004 -57.988 -55.987 1 88.81 ? C6 EPE 1206 C 1 HETATM 7 C C7 EPE . . . H 2 -93.651 -56.933 -59.099 1 85.16 ? C7 EPE 1206 C 1 HETATM 8 C C8 EPE . . . H 2 -93.724 -58.343 -59.646 1 84.43 ? C8 EPE 1206 C 1 HETATM 9 O O8 EPE . . . H 2 -94.378 -58.24 -60.91 1 84.81 ? O8 EPE 1206 C 1 HETATM 10 C C9 EPE . . . H 2 -89.797 -56.762 -55.427 1 90.1 ? C9 EPE 1206 C 1 HETATM 11 C C10 EPE . . . H 2 -89.533 -57.556 -54.121 1 90.37 ? C10 EPE 1206 C 1 HETATM 12 S S EPE . . . H 2 -88.24 -57.044 -53.157 1 89.79 ? S EPE 1206 C 1 HETATM 13 O O1S EPE . . . H 2 -87.68 -55.743 -53.587 1 88.92 ? O1S EPE 1206 C 1 HETATM 14 O O2S EPE . . . H 2 -87.14 -58.04 -53.226 1 90.42 ? O2S EPE 1206 C 1 HETATM 15 O O3S EPE . . . H 2 -88.714 -56.95 -51.762 1 89.13 ? O3S EPE 1206 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #