data_2BS5
#
_model_server_result.job_id            K9_OdhCg7GoFq4gWuud8bg 
_model_server_result.datetime_utc      '2024-11-22 12:47:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bs5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":807}' 
#
_entry.id    2BS5 
#
_exptl.entry_id    2BS5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2BS5 
_cell.length_a            76.824 
_cell.length_b            76.824 
_cell.length_c            101.519 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BS5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 GAL BGC C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 FUC GAL C1 O1 . O2 HO2 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B BGC 1 B 1 BGC A 801 BGC 
2 n B GAL 2 B 2 GAL A 802 GAL 
2 n B FUC 3 B 3 FUC A 803 FUC 
2 n C BGC 1 C 1 BGC A 901 BGC 
2 n C GAL 2 C 2 GAL A 902 GAL 
2 n C FUC 3 C 3 FUC A 903 FUC 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O4 BGC . B BGC 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 B O2 GAL . B GAL 2 1_555 B C1 FUC . B FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale3 C O4 BGC . C BGC 1 1_555 C C1 GAL . C GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale4 C O2 GAL . C GAL 2 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2BS5 
_atom_sites.fract_transf_matrix[1][1]    0.013017 
_atom_sites.fract_transf_matrix[1][2]    0.007515 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01503 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00985 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 CL A 1 807 904 CL CL . 
E 4 HOH A 1 901 2051 HOH HOH . 
E 4 HOH A 2 902 2032 HOH HOH . 
E 4 HOH A 3 903 2049 HOH HOH . 
E 4 HOH A 4 904 2028 HOH HOH . 
E 4 HOH A 5 905 2018 HOH HOH . 
E 4 HOH A 6 906 2064 HOH HOH . 
E 4 HOH A 7 907 2026 HOH HOH . 
E 4 HOH A 8 908 2041 HOH HOH . 
E 4 HOH A 9 909 2015 HOH HOH . 
E 4 HOH A 10 910 2006 HOH HOH . 
E 4 HOH A 11 911 2072 HOH HOH . 
E 4 HOH A 12 912 2061 HOH HOH . 
E 4 HOH A 13 913 2022 HOH HOH . 
E 4 HOH A 14 914 2071 HOH HOH . 
E 4 HOH A 15 915 2027 HOH HOH . 
E 4 HOH A 16 916 2037 HOH HOH . 
E 4 HOH A 17 917 2058 HOH HOH . 
E 4 HOH A 18 918 2053 HOH HOH . 
E 4 HOH A 19 919 2075 HOH HOH . 
E 4 HOH A 20 920 2055 HOH HOH . 
E 4 HOH A 21 921 2029 HOH HOH . 
E 4 HOH A 22 922 2052 HOH HOH . 
E 4 HOH A 23 923 2054 HOH HOH . 
E 4 HOH A 24 924 2044 HOH HOH . 
E 4 HOH A 25 925 2025 HOH HOH . 
E 4 HOH A 26 926 2046 HOH HOH . 
E 4 HOH A 27 927 2004 HOH HOH . 
E 4 HOH A 28 928 2024 HOH HOH . 
E 4 HOH A 29 929 2010 HOH HOH . 
E 4 HOH A 30 930 2065 HOH HOH . 
E 4 HOH A 31 931 2009 HOH HOH . 
E 4 HOH A 32 932 2007 HOH HOH . 
E 4 HOH A 33 933 2040 HOH HOH . 
E 4 HOH A 34 934 2066 HOH HOH . 
E 4 HOH A 35 935 2020 HOH HOH . 
E 4 HOH A 36 936 2011 HOH HOH . 
E 4 HOH A 37 937 2036 HOH HOH . 
E 4 HOH A 38 938 2045 HOH HOH . 
E 4 HOH A 39 939 2042 HOH HOH . 
E 4 HOH A 40 940 2063 HOH HOH . 
E 4 HOH A 41 941 2039 HOH HOH . 
E 4 HOH A 42 942 2069 HOH HOH . 
E 4 HOH A 43 943 2074 HOH HOH . 
E 4 HOH A 44 944 2013 HOH HOH . 
E 4 HOH A 45 945 2034 HOH HOH . 
E 4 HOH A 46 946 2035 HOH HOH . 
E 4 HOH A 47 947 2067 HOH HOH . 
E 4 HOH A 48 948 2033 HOH HOH . 
E 4 HOH A 49 949 2060 HOH HOH . 
E 4 HOH A 50 950 2068 HOH HOH . 
E 4 HOH A 51 951 2031 HOH HOH . 
E 4 HOH A 52 952 2062 HOH HOH . 
E 4 HOH A 53 953 2059 HOH HOH . 
E 4 HOH A 54 954 2050 HOH HOH . 
E 4 HOH A 55 955 2057 HOH HOH . 
E 4 HOH A 56 956 2043 HOH HOH . 
E 4 HOH A 57 957 2008 HOH HOH . 
E 4 HOH A 58 958 2076 HOH HOH . 
E 4 HOH A 59 959 2047 HOH HOH . 
E 4 HOH A 60 960 2073 HOH HOH . 
E 4 HOH A 61 961 2070 HOH HOH . 
E 4 HOH A 62 962 2048 HOH HOH . 
E 4 HOH A 63 963 2038 HOH HOH . 
E 4 HOH A 64 964 2005 HOH HOH . 
E 4 HOH A 65 965 2056 HOH HOH . 
E 4 HOH A 66 966 2030 HOH HOH . 
E 4 HOH A 67 967 2019 HOH HOH . 
E 4 HOH A 68 968 2017 HOH HOH . 
E 4 HOH A 69 969 2016 HOH HOH . 
E 4 HOH A 70 970 2023 HOH HOH . 
E 4 HOH A 71 971 2003 HOH HOH . 
E 4 HOH A 72 972 2002 HOH HOH . 
E 4 HOH A 73 973 2001 HOH HOH . 
E 4 HOH A 74 974 2014 HOH HOH . 
E 4 HOH A 75 975 2012 HOH HOH . 
E 4 HOH A 76 976 2021 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               3.369 
_atom_site.Cartn_y               22.161 
_atom_site.Cartn_z               33.839 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        15.47 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           807 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#