data_2BTO # _model_server_result.job_id snEtadf3YlaqugDNTAZ10g _model_server_result.datetime_utc '2024-10-12 14:26:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bto # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1433}' # _entry.id 2BTO # _exptl.entry_id 2BTO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 523.18 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2BTO _cell.length_a 180.539 _cell.length_b 180.539 _cell.length_c 84.229 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BTO _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 180.539 0 0 3 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 90.2695 -156.35136 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 32 _struct_conn.ptnr1_auth_asym_id T _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 51 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 35 _struct_conn.ptnr2_auth_asym_id T _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 54 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.057 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H16 N5 O14 P3' _chem_comp.formula_weight 523.18 _chem_comp.id GTP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2BTO _atom_sites.fract_transf_matrix[1][1] 0.005539 _atom_sites.fract_transf_matrix[1][2] 0.003198 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006396 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GTP A 1 1433 1433 GTP GTP . E 3 GTP B 1 1433 1433 GTP GTP . F 4 HOH A 1 2001 2001 HOH HOH . F 4 HOH A 2 2002 2002 HOH HOH . F 4 HOH A 3 2003 2003 HOH HOH . F 4 HOH A 4 2004 2004 HOH HOH . F 4 HOH A 5 2005 2005 HOH HOH . F 4 HOH A 6 2006 2006 HOH HOH . F 4 HOH A 7 2007 2007 HOH HOH . F 4 HOH A 8 2008 2008 HOH HOH . F 4 HOH A 9 2009 2009 HOH HOH . F 4 HOH A 10 2010 2010 HOH HOH . F 4 HOH A 11 2011 2011 HOH HOH . F 4 HOH A 12 2012 2012 HOH HOH . F 4 HOH A 13 2013 2013 HOH HOH . F 4 HOH A 14 2014 2014 HOH HOH . F 4 HOH A 15 2015 2015 HOH HOH . F 4 HOH A 16 2016 2016 HOH HOH . F 4 HOH A 17 2017 2017 HOH HOH . F 4 HOH A 18 2018 2018 HOH HOH . F 4 HOH A 19 2019 2019 HOH HOH . F 4 HOH A 20 2020 2020 HOH HOH . F 4 HOH A 21 2021 2021 HOH HOH . F 4 HOH A 22 2022 2022 HOH HOH . F 4 HOH A 23 2023 2023 HOH HOH . F 4 HOH A 24 2024 2024 HOH HOH . F 4 HOH A 25 2025 2025 HOH HOH . F 4 HOH A 26 2026 2026 HOH HOH . F 4 HOH A 27 2027 2027 HOH HOH . F 4 HOH A 28 2028 2028 HOH HOH . F 4 HOH A 29 2029 2029 HOH HOH . F 4 HOH A 30 2030 2030 HOH HOH . F 4 HOH A 31 2031 2031 HOH HOH . F 4 HOH A 32 2032 2032 HOH HOH . F 4 HOH A 33 2033 2033 HOH HOH . F 4 HOH A 34 2034 2034 HOH HOH . F 4 HOH A 35 2035 2035 HOH HOH . F 4 HOH A 36 2036 2036 HOH HOH . F 4 HOH A 37 2037 2037 HOH HOH . F 4 HOH A 38 2038 2038 HOH HOH . F 4 HOH A 39 2039 2039 HOH HOH . F 4 HOH A 40 2040 2040 HOH HOH . F 4 HOH A 41 2041 2041 HOH HOH . F 4 HOH A 42 2042 2042 HOH HOH . F 4 HOH A 43 2043 2043 HOH HOH . F 4 HOH A 44 2044 2044 HOH HOH . F 4 HOH A 45 2045 2045 HOH HOH . F 4 HOH A 46 2046 2046 HOH HOH . F 4 HOH A 47 2047 2047 HOH HOH . F 4 HOH A 48 2048 2048 HOH HOH . F 4 HOH A 49 2049 2049 HOH HOH . F 4 HOH A 50 2050 2050 HOH HOH . F 4 HOH A 51 2051 2051 HOH HOH . F 4 HOH A 52 2052 2052 HOH HOH . F 4 HOH A 53 2053 2053 HOH HOH . F 4 HOH A 54 2054 2054 HOH HOH . F 4 HOH A 55 2055 2055 HOH HOH . F 4 HOH A 56 2056 2056 HOH HOH . F 4 HOH A 57 2057 2057 HOH HOH . F 4 HOH A 58 2058 2058 HOH HOH . F 4 HOH A 59 2059 2059 HOH HOH . F 4 HOH A 60 2060 2060 HOH HOH . F 4 HOH A 61 2061 2061 HOH HOH . F 4 HOH A 62 2062 2062 HOH HOH . F 4 HOH A 63 2063 2063 HOH HOH . F 4 HOH A 64 2064 2064 HOH HOH . F 4 HOH A 65 2065 2065 HOH HOH . F 4 HOH A 66 2066 2066 HOH HOH . F 4 HOH A 67 2067 2067 HOH HOH . F 4 HOH A 68 2068 2068 HOH HOH . F 4 HOH A 69 2069 2069 HOH HOH . F 4 HOH A 70 2070 2070 HOH HOH . F 4 HOH A 71 2071 2071 HOH HOH . F 4 HOH A 72 2072 2072 HOH HOH . F 4 HOH A 73 2073 2073 HOH HOH . F 4 HOH A 74 2074 2074 HOH HOH . F 4 HOH A 75 2075 2075 HOH HOH . F 4 HOH A 76 2076 2076 HOH HOH . F 4 HOH A 77 2077 2077 HOH HOH . F 4 HOH A 78 2078 2078 HOH HOH . F 4 HOH A 79 2079 2079 HOH HOH . F 4 HOH A 80 2080 2080 HOH HOH . F 4 HOH A 81 2081 2081 HOH HOH . F 4 HOH A 82 2082 2082 HOH HOH . F 4 HOH A 83 2083 2083 HOH HOH . F 4 HOH A 84 2084 2084 HOH HOH . F 4 HOH A 85 2085 2085 HOH HOH . F 4 HOH A 86 2086 2086 HOH HOH . F 4 HOH A 87 2087 2087 HOH HOH . F 4 HOH A 88 2088 2088 HOH HOH . F 4 HOH A 89 2089 2089 HOH HOH . F 4 HOH A 90 2090 2090 HOH HOH . F 4 HOH A 91 2091 2091 HOH HOH . F 4 HOH A 92 2092 2092 HOH HOH . F 4 HOH A 93 2093 2093 HOH HOH . F 4 HOH A 94 2094 2094 HOH HOH . F 4 HOH A 95 2095 2095 HOH HOH . F 4 HOH A 96 2096 2096 HOH HOH . F 4 HOH A 97 2097 2097 HOH HOH . F 4 HOH A 98 2098 2098 HOH HOH . F 4 HOH A 99 2099 2099 HOH HOH . F 4 HOH A 100 2100 2100 HOH HOH . F 4 HOH A 101 2101 2101 HOH HOH . F 4 HOH A 102 2102 2102 HOH HOH . F 4 HOH A 103 2103 2103 HOH HOH . F 4 HOH A 104 2104 2104 HOH HOH . F 4 HOH A 105 2105 2105 HOH HOH . F 4 HOH A 106 2106 2106 HOH HOH . F 4 HOH A 107 2107 2107 HOH HOH . F 4 HOH A 108 2108 2108 HOH HOH . G 4 HOH B 1 2001 2001 HOH HOH . G 4 HOH B 2 2002 2002 HOH HOH . G 4 HOH B 3 2003 2003 HOH HOH . G 4 HOH B 4 2004 2004 HOH HOH . G 4 HOH B 5 2005 2005 HOH HOH . G 4 HOH B 6 2006 2006 HOH HOH . G 4 HOH B 7 2007 2007 HOH HOH . G 4 HOH B 8 2008 2008 HOH HOH . G 4 HOH B 9 2009 2009 HOH HOH . G 4 HOH B 10 2010 2010 HOH HOH . G 4 HOH B 11 2011 2011 HOH HOH . G 4 HOH B 12 2012 2012 HOH HOH . G 4 HOH B 13 2013 2013 HOH HOH . G 4 HOH B 14 2014 2014 HOH HOH . G 4 HOH B 15 2015 2015 HOH HOH . G 4 HOH B 16 2016 2016 HOH HOH . G 4 HOH B 17 2017 2017 HOH HOH . G 4 HOH B 18 2018 2018 HOH HOH . G 4 HOH B 19 2019 2019 HOH HOH . G 4 HOH B 20 2020 2020 HOH HOH . G 4 HOH B 21 2021 2021 HOH HOH . G 4 HOH B 22 2022 2022 HOH HOH . G 4 HOH B 23 2023 2023 HOH HOH . G 4 HOH B 24 2024 2024 HOH HOH . G 4 HOH B 25 2025 2025 HOH HOH . G 4 HOH B 26 2026 2026 HOH HOH . G 4 HOH B 27 2027 2027 HOH HOH . G 4 HOH B 28 2028 2028 HOH HOH . G 4 HOH B 29 2029 2029 HOH HOH . G 4 HOH B 30 2030 2030 HOH HOH . G 4 HOH B 31 2031 2031 HOH HOH . G 4 HOH B 32 2032 2032 HOH HOH . G 4 HOH B 33 2033 2033 HOH HOH . G 4 HOH B 34 2034 2034 HOH HOH . G 4 HOH B 35 2035 2035 HOH HOH . G 4 HOH B 36 2036 2036 HOH HOH . G 4 HOH B 37 2037 2037 HOH HOH . G 4 HOH B 38 2038 2038 HOH HOH . G 4 HOH B 39 2039 2039 HOH HOH . G 4 HOH B 40 2040 2040 HOH HOH . G 4 HOH B 41 2041 2041 HOH HOH . G 4 HOH B 42 2042 2042 HOH HOH . G 4 HOH B 43 2043 2043 HOH HOH . G 4 HOH B 44 2044 2044 HOH HOH . G 4 HOH B 45 2045 2045 HOH HOH . G 4 HOH B 46 2046 2046 HOH HOH . G 4 HOH B 47 2047 2047 HOH HOH . G 4 HOH B 48 2048 2048 HOH HOH . G 4 HOH B 49 2049 2049 HOH HOH . G 4 HOH B 50 2050 2050 HOH HOH . G 4 HOH B 51 2051 2051 HOH HOH . G 4 HOH B 52 2052 2052 HOH HOH . G 4 HOH B 53 2053 2053 HOH HOH . G 4 HOH B 54 2054 2054 HOH HOH . G 4 HOH B 55 2055 2055 HOH HOH . G 4 HOH B 56 2056 2056 HOH HOH . G 4 HOH B 57 2057 2057 HOH HOH . G 4 HOH B 58 2058 2058 HOH HOH . G 4 HOH B 59 2059 2059 HOH HOH . G 4 HOH B 60 2060 2060 HOH HOH . G 4 HOH B 61 2061 2061 HOH HOH . G 4 HOH B 62 2062 2062 HOH HOH . G 4 HOH B 63 2063 2063 HOH HOH . G 4 HOH B 64 2064 2064 HOH HOH . G 4 HOH B 65 2065 2065 HOH HOH . G 4 HOH B 66 2066 2066 HOH HOH . G 4 HOH B 67 2067 2067 HOH HOH . G 4 HOH B 68 2068 2068 HOH HOH . G 4 HOH B 69 2069 2069 HOH HOH . G 4 HOH B 70 2070 2070 HOH HOH . G 4 HOH B 71 2071 2071 HOH HOH . G 4 HOH B 72 2072 2072 HOH HOH . G 4 HOH B 73 2073 2073 HOH HOH . G 4 HOH B 74 2074 2074 HOH HOH . G 4 HOH B 75 2075 2075 HOH HOH . G 4 HOH B 76 2076 2076 HOH HOH . G 4 HOH B 77 2077 2077 HOH HOH . G 4 HOH B 78 2078 2078 HOH HOH . G 4 HOH B 79 2079 2079 HOH HOH . G 4 HOH B 80 2080 2080 HOH HOH . G 4 HOH B 81 2081 2081 HOH HOH . G 4 HOH B 82 2082 2082 HOH HOH . G 4 HOH B 83 2083 2083 HOH HOH . G 4 HOH B 84 2084 2084 HOH HOH . G 4 HOH B 85 2085 2085 HOH HOH . G 4 HOH B 86 2086 2086 HOH HOH . G 4 HOH B 87 2087 2087 HOH HOH . G 4 HOH B 88 2088 2088 HOH HOH . G 4 HOH B 89 2089 2089 HOH HOH . G 4 HOH B 90 2090 2090 HOH HOH . G 4 HOH B 91 2091 2091 HOH HOH . G 4 HOH B 92 2092 2092 HOH HOH . G 4 HOH B 93 2093 2093 HOH HOH . H 4 HOH T 1 2001 2001 HOH HOH . H 4 HOH T 2 2002 2002 HOH HOH . H 4 HOH T 3 2003 2003 HOH HOH . H 4 HOH T 4 2004 2004 HOH HOH . H 4 HOH T 5 2005 2005 HOH HOH . H 4 HOH T 6 2006 2006 HOH HOH . H 4 HOH T 7 2007 2007 HOH HOH . H 4 HOH T 8 2008 2008 HOH HOH . H 4 HOH T 9 2009 2009 HOH HOH . H 4 HOH T 10 2010 2010 HOH HOH . H 4 HOH T 11 2011 2011 HOH HOH . H 4 HOH T 12 2012 2012 HOH HOH . H 4 HOH T 13 2013 2013 HOH HOH . H 4 HOH T 14 2014 2014 HOH HOH . H 4 HOH T 15 2015 2015 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GTP . . . D 3 84.284 -13.943 -3.332 1 52.55 ? PG GTP 1433 A 1 HETATM 2 O O1G GTP . . . D 3 84.232 -12.784 -2.363 1 53.82 ? O1G GTP 1433 A 1 HETATM 3 O O2G GTP . . . D 3 83.665 -15.105 -2.594 1 54.92 ? O2G GTP 1433 A 1 HETATM 4 O O3G GTP . . . D 3 83.433 -13.727 -4.53 1 52.51 ? O3G GTP 1433 A 1 HETATM 5 O O3B GTP . . . D 3 85.84 -14.245 -3.708 1 51.79 ? O3B GTP 1433 A 1 HETATM 6 P PB GTP . . . D 3 86.337 -15.393 -4.71 1 48.03 ? PB GTP 1433 A 1 HETATM 7 O O1B GTP . . . D 3 87.688 -15.216 -5.304 1 49.65 ? O1B GTP 1433 A 1 HETATM 8 O O2B GTP . . . D 3 85.45 -15.318 -5.895 1 53.4 ? O2B GTP 1433 A 1 HETATM 9 O O3A GTP . . . D 3 86.123 -16.801 -4.003 1 51.76 ? O3A GTP 1433 A 1 HETATM 10 P PA GTP . . . D 3 87.033 -18.097 -4.358 1 54.04 ? PA GTP 1433 A 1 HETATM 11 O O1A GTP . . . D 3 87.19 -18.9 -3.085 1 53.62 ? O1A GTP 1433 A 1 HETATM 12 O O2A GTP . . . D 3 88.399 -17.711 -4.912 1 51.76 ? O2A GTP 1433 A 1 HETATM 13 O O5' GTP . . . D 3 86.127 -18.953 -5.398 1 54.86 ? O5' GTP 1433 A 1 HETATM 14 C C5' GTP . . . D 3 85.265 -20.011 -4.995 1 55.63 ? C5' GTP 1433 A 1 HETATM 15 C C4' GTP . . . D 3 85.534 -21.304 -5.783 1 56.55 ? C4' GTP 1433 A 1 HETATM 16 O O4' GTP . . . D 3 86.888 -21.729 -5.701 1 56.03 ? O4' GTP 1433 A 1 HETATM 17 C C3' GTP . . . D 3 84.719 -22.464 -5.227 1 57.38 ? C3' GTP 1433 A 1 HETATM 18 O O3' GTP . . . D 3 84.298 -23.272 -6.302 1 57.6 ? O3' GTP 1433 A 1 HETATM 19 C C2' GTP . . . D 3 85.669 -23.24 -4.327 1 57.55 ? C2' GTP 1433 A 1 HETATM 20 O O2' GTP . . . D 3 85.463 -24.621 -4.456 1 58.79 ? O2' GTP 1433 A 1 HETATM 21 C C1' GTP . . . D 3 87.028 -22.913 -4.909 1 56.29 ? C1' GTP 1433 A 1 HETATM 22 N N9 GTP . . . D 3 88.11 -22.627 -3.955 1 55.93 ? N9 GTP 1433 A 1 HETATM 23 C C8 GTP . . . D 3 88.12 -21.764 -2.88 1 55.43 ? C8 GTP 1433 A 1 HETATM 24 N N7 GTP . . . D 3 89.367 -21.776 -2.337 1 55.12 ? N7 GTP 1433 A 1 HETATM 25 C C5 GTP . . . D 3 90.142 -22.615 -3.071 1 55.49 ? C5 GTP 1433 A 1 HETATM 26 C C6 GTP . . . D 3 91.483 -22.991 -2.984 1 56.06 ? C6 GTP 1433 A 1 HETATM 27 O O6 GTP . . . D 3 92.209 -22.532 -2.092 1 55.6 ? O6 GTP 1433 A 1 HETATM 28 N N1 GTP . . . D 3 91.988 -23.903 -3.901 1 55.72 ? N1 GTP 1433 A 1 HETATM 29 C C2 GTP . . . D 3 91.192 -24.421 -4.898 1 54.9 ? C2 GTP 1433 A 1 HETATM 30 N N2 GTP . . . D 3 91.709 -25.282 -5.757 1 54.92 ? N2 GTP 1433 A 1 HETATM 31 N N3 GTP . . . D 3 89.874 -24.033 -4.993 1 54.45 ? N3 GTP 1433 A 1 HETATM 32 C C4 GTP . . . D 3 89.365 -23.152 -4.097 1 55.35 ? C4 GTP 1433 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #