data_2BU2
#
_model_server_result.job_id            5H-UXDiAZTspxUl-MlaTug 
_model_server_result.datetime_utc      '2024-11-22 18:24:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bu2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1387}' 
#
_entry.id    2BU2 
#
_exptl.entry_id    2BU2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              383.365 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-({(2R,5S)-2,5-DIMETHYL-4-[(2R)-3,3,3-TRIFLUORO-2-HYDROXY-2-METHYLPROPANOYL]PIPERAZIN-1-YL}CARBONYL)BENZONITRILE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2BU2 
_cell.length_a            108.703 
_cell.length_b            108.703 
_cell.length_c            83.855 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BU2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 54.3515 94.139559 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 242 A ASN 247 1_555 D MG MG . A MG 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc2 B O2G ATP . A ATP 1386 1_555 D MG MG . A MG 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc3 B O1A ATP . A ATP 1386 1_555 D MG MG . A MG 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc4 B O2B ATP . A ATP 1386 1_555 D MG MG . A MG 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc5 D MG MG . A MG 1388 1_555 E O HOH . A HOH 2040 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc6 D MG MG . A MG 1388 1_555 E O HOH . A HOH 2087 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
#
_chem_comp.formula           'C18 H20 F3 N3 O3' 
_chem_comp.formula_weight    383.365 
_chem_comp.id                TF1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-({(2R,5S)-2,5-DIMETHYL-4-[(2R)-3,3,3-TRIFLUORO-2-HYDROXY-2-METHYLPROPANOYL]PIPERAZIN-1-YL}CARBONYL)BENZONITRILE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 TF1 sing 339 n n 
N1 C2 TF1 sing 340 n n 
N1 C3 TF1 sing 341 n n 
C1 C4 TF1 sing 342 n n 
C1 O1 TF1 doub 343 n n 
C2 C5 TF1 sing 344 n n 
C2 C6 TF1 sing 345 n n 
C2 H2 TF1 sing 346 n n 
C3 C7 TF1 sing 347 n n 
C3 H3C1 TF1 sing 348 n n 
C3 H3C2 TF1 sing 349 n n 
C4 C8 TF1 sing 350 n n 
C4 C9 TF1 sing 351 n n 
C4 O2 TF1 sing 352 n n 
C5 N2 TF1 sing 353 n n 
C5 H5C1 TF1 sing 354 n n 
C5 H5C2 TF1 sing 355 n n 
C6 H6C1 TF1 sing 356 n n 
C6 H6C2 TF1 sing 357 n n 
C6 H6C3 TF1 sing 358 n n 
C7 N2 TF1 sing 359 n n 
C7 C10 TF1 sing 360 n n 
C7 H7 TF1 sing 361 n n 
C8 F1 TF1 sing 362 n n 
C8 F2 TF1 sing 363 n n 
C8 F3 TF1 sing 364 n n 
C9 H9C1 TF1 sing 365 n n 
C9 H9C2 TF1 sing 366 n n 
C9 H9C3 TF1 sing 367 n n 
O2 HA TF1 sing 368 n n 
N2 C11 TF1 sing 369 n n 
C10 H101 TF1 sing 370 n n 
C10 H102 TF1 sing 371 n n 
C10 H103 TF1 sing 372 n n 
C11 C12 TF1 sing 373 n n 
C11 O3 TF1 doub 374 n n 
C12 C13 TF1 doub 375 n y 
C12 C14 TF1 sing 376 n y 
C13 C15 TF1 sing 377 n y 
C13 H13 TF1 sing 378 n n 
C14 C16 TF1 doub 379 n y 
C14 H14 TF1 sing 380 n n 
C15 C17 TF1 doub 381 n y 
C15 H15 TF1 sing 382 n n 
C16 C17 TF1 sing 383 n y 
C16 H16 TF1 sing 384 n n 
C17 C18 TF1 sing 385 n n 
C18 N3 TF1 trip 386 n n 
#
_atom_sites.entry_id                     2BU2 
_atom_sites.fract_transf_matrix[1][1]    0.009199 
_atom_sites.fract_transf_matrix[1][2]    0.005311 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010623 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011925 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 1386 1386 ATP ATP . 
C 3 TF1 A 1 1387 1387 TF1 TF1 . 
D 4 MG A 1 1388 1388 MG MG . 
E 5 HOH A 1 2001 2001 HOH HOH . 
E 5 HOH A 2 2002 2002 HOH HOH . 
E 5 HOH A 3 2003 2003 HOH HOH . 
E 5 HOH A 4 2004 2004 HOH HOH . 
E 5 HOH A 5 2005 2005 HOH HOH . 
E 5 HOH A 6 2006 2006 HOH HOH . 
E 5 HOH A 7 2007 2007 HOH HOH . 
E 5 HOH A 8 2008 2008 HOH HOH . 
E 5 HOH A 9 2009 2009 HOH HOH . 
E 5 HOH A 10 2010 2010 HOH HOH . 
E 5 HOH A 11 2011 2011 HOH HOH . 
E 5 HOH A 12 2012 2012 HOH HOH . 
E 5 HOH A 13 2013 2013 HOH HOH . 
E 5 HOH A 14 2014 2014 HOH HOH . 
E 5 HOH A 15 2015 2015 HOH HOH . 
E 5 HOH A 16 2016 2016 HOH HOH . 
E 5 HOH A 17 2017 2017 HOH HOH . 
E 5 HOH A 18 2018 2018 HOH HOH . 
E 5 HOH A 19 2019 2019 HOH HOH . 
E 5 HOH A 20 2020 2020 HOH HOH . 
E 5 HOH A 21 2021 2021 HOH HOH . 
E 5 HOH A 22 2022 2022 HOH HOH . 
E 5 HOH A 23 2023 2023 HOH HOH . 
E 5 HOH A 24 2024 2024 HOH HOH . 
E 5 HOH A 25 2025 2025 HOH HOH . 
E 5 HOH A 26 2026 2026 HOH HOH . 
E 5 HOH A 27 2027 2027 HOH HOH . 
E 5 HOH A 28 2028 2028 HOH HOH . 
E 5 HOH A 29 2029 2029 HOH HOH . 
E 5 HOH A 30 2030 2030 HOH HOH . 
E 5 HOH A 31 2031 2031 HOH HOH . 
E 5 HOH A 32 2032 2032 HOH HOH . 
E 5 HOH A 33 2033 2033 HOH HOH . 
E 5 HOH A 34 2034 2034 HOH HOH . 
E 5 HOH A 35 2035 2035 HOH HOH . 
E 5 HOH A 36 2036 2036 HOH HOH . 
E 5 HOH A 37 2037 2037 HOH HOH . 
E 5 HOH A 38 2038 2038 HOH HOH . 
E 5 HOH A 39 2039 2039 HOH HOH . 
E 5 HOH A 40 2040 2040 HOH HOH . 
E 5 HOH A 41 2041 2041 HOH HOH . 
E 5 HOH A 42 2042 2042 HOH HOH . 
E 5 HOH A 43 2043 2043 HOH HOH . 
E 5 HOH A 44 2044 2044 HOH HOH . 
E 5 HOH A 45 2045 2045 HOH HOH . 
E 5 HOH A 46 2046 2046 HOH HOH . 
E 5 HOH A 47 2047 2047 HOH HOH . 
E 5 HOH A 48 2048 2048 HOH HOH . 
E 5 HOH A 49 2049 2049 HOH HOH . 
E 5 HOH A 50 2050 2050 HOH HOH . 
E 5 HOH A 51 2051 2051 HOH HOH . 
E 5 HOH A 52 2052 2052 HOH HOH . 
E 5 HOH A 53 2053 2053 HOH HOH . 
E 5 HOH A 54 2054 2054 HOH HOH . 
E 5 HOH A 55 2055 2055 HOH HOH . 
E 5 HOH A 56 2056 2056 HOH HOH . 
E 5 HOH A 57 2057 2057 HOH HOH . 
E 5 HOH A 58 2058 2058 HOH HOH . 
E 5 HOH A 59 2059 2059 HOH HOH . 
E 5 HOH A 60 2060 2060 HOH HOH . 
E 5 HOH A 61 2061 2061 HOH HOH . 
E 5 HOH A 62 2062 2062 HOH HOH . 
E 5 HOH A 63 2063 2063 HOH HOH . 
E 5 HOH A 64 2064 2064 HOH HOH . 
E 5 HOH A 65 2065 2065 HOH HOH . 
E 5 HOH A 66 2066 2066 HOH HOH . 
E 5 HOH A 67 2067 2067 HOH HOH . 
E 5 HOH A 68 2068 2068 HOH HOH . 
E 5 HOH A 69 2069 2069 HOH HOH . 
E 5 HOH A 70 2070 2070 HOH HOH . 
E 5 HOH A 71 2071 2071 HOH HOH . 
E 5 HOH A 72 2072 2072 HOH HOH . 
E 5 HOH A 73 2073 2073 HOH HOH . 
E 5 HOH A 74 2074 2074 HOH HOH . 
E 5 HOH A 75 2075 2075 HOH HOH . 
E 5 HOH A 76 2076 2076 HOH HOH . 
E 5 HOH A 77 2077 2077 HOH HOH . 
E 5 HOH A 78 2078 2078 HOH HOH . 
E 5 HOH A 79 2079 2079 HOH HOH . 
E 5 HOH A 80 2080 2080 HOH HOH . 
E 5 HOH A 81 2081 2081 HOH HOH . 
E 5 HOH A 82 2082 2082 HOH HOH . 
E 5 HOH A 83 2083 2083 HOH HOH . 
E 5 HOH A 84 2084 2084 HOH HOH . 
E 5 HOH A 85 2085 2085 HOH HOH . 
E 5 HOH A 86 2086 2086 HOH HOH . 
E 5 HOH A 87 2087 2087 HOH HOH . 
E 5 HOH A 88 2088 2088 HOH HOH . 
E 5 HOH A 89 2089 2089 HOH HOH . 
E 5 HOH A 90 2090 2090 HOH HOH . 
E 5 HOH A 91 2091 2091 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 TF1 . . . C 3 57.455 60.222 76.806 1 80.77 ? N1 TF1 1387 A 1 
HETATM 2 C C1 TF1 . . . C 3 58.048 59.283 75.917 1 80.47 ? C1 TF1 1387 A 1 
HETATM 3 C C2 TF1 . . . C 3 56.649 61.26 76.087 1 80.86 ? C2 TF1 1387 A 1 
HETATM 4 C C3 TF1 . . . C 3 57.323 60.187 78.294 1 80.83 ? C3 TF1 1387 A 1 
HETATM 5 C C4 TF1 . . . C 3 58.916 58.068 76.457 1 80.26 ? C4 TF1 1387 A 1 
HETATM 6 O O1 TF1 . . . C 3 57.874 59.385 74.699 1 80.98 ? O1 TF1 1387 A 1 
HETATM 7 C C5 TF1 . . . C 3 56.92 62.637 76.731 1 81.15 ? C5 TF1 1387 A 1 
HETATM 8 C C6 TF1 . . . C 3 55.142 60.87 76.092 1 80.33 ? C6 TF1 1387 A 1 
HETATM 9 C C7 TF1 . . . C 3 57.642 61.552 78.936 1 81.18 ? C7 TF1 1387 A 1 
HETATM 10 C C8 TF1 . . . C 3 58.006 56.852 76.916 1 80.16 ? C8 TF1 1387 A 1 
HETATM 11 C C9 TF1 . . . C 3 59.819 57.584 75.281 1 79.37 ? C9 TF1 1387 A 1 
HETATM 12 O O2 TF1 . . . C 3 59.752 58.463 77.423 1 79.87 ? O2 TF1 1387 A 1 
HETATM 13 N N2 TF1 . . . C 3 56.796 62.573 78.23 1 81.54 ? N2 TF1 1387 A 1 
HETATM 14 C C10 TF1 . . . C 3 59.141 61.935 78.845 1 81.01 ? C10 TF1 1387 A 1 
HETATM 15 F F1 TF1 . . . C 3 57.227 56.435 75.931 1 80.24 ? F1 TF1 1387 A 1 
HETATM 16 F F2 TF1 . . . C 3 58.721 55.828 77.343 1 81.23 ? F2 TF1 1387 A 1 
HETATM 17 F F3 TF1 . . . C 3 57.218 57.187 77.921 1 80.34 ? F3 TF1 1387 A 1 
HETATM 18 C C11 TF1 . . . C 3 55.922 63.493 78.863 1 81.43 ? C11 TF1 1387 A 1 
HETATM 19 C C12 TF1 . . . C 3 55.736 63.573 80.343 1 81.5 ? C12 TF1 1387 A 1 
HETATM 20 O O3 TF1 . . . C 3 55.298 64.277 78.156 1 81.73 ? O3 TF1 1387 A 1 
HETATM 21 C C13 TF1 . . . C 3 56.866 63.966 81.144 1 81.77 ? C13 TF1 1387 A 1 
HETATM 22 C C14 TF1 . . . C 3 54.436 63.364 80.947 1 81.3 ? C14 TF1 1387 A 1 
HETATM 23 C C15 TF1 . . . C 3 56.715 64.182 82.542 1 82.04 ? C15 TF1 1387 A 1 
HETATM 24 C C16 TF1 . . . C 3 54.281 63.587 82.37 1 81.76 ? C16 TF1 1387 A 1 
HETATM 25 C C17 TF1 . . . C 3 55.436 64.001 83.147 1 82.43 ? C17 TF1 1387 A 1 
HETATM 26 C C18 TF1 . . . C 3 55.339 64.212 84.568 1 82.78 ? C18 TF1 1387 A 1 
HETATM 27 N N3 TF1 . . . C 3 55.294 64.381 85.717 1 83.47 ? N3 TF1 1387 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#