data_2BVG # _model_server_result.job_id o68rfMZ_9Kh4QbCr1nxVCA _model_server_result.datetime_utc '2025-08-31 21:18:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bvg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":600}' # _entry.id 2BVG # _exptl.entry_id 2BVG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.06 _cell.angle_gamma 90 _cell.entry_id 2BVG _cell.length_a 103.64 _cell.length_b 95.23 _cell.length_c 122.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BVG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 PQS monomeric 1 author_and_software_defined_assembly 3 PQS monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,F 2 1 C,G 3 1 D,H 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 59 1_555 B SG CYS 59 B CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 C SG CYS 59 C CYS 59 1_555 D SG CYS 59 D CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? covale ? covale1 A ND1 HIS 72 A HIS 72 1_555 E C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale2 B ND1 HIS 72 B HIS 72 1_555 F C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale3 C ND1 HIS 72 C HIS 72 1_555 G C8M FAD . C FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale4 D ND1 HIS 72 D HIS 72 1_555 H C8M FAD . D FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2BVG _atom_sites.fract_transf_matrix[1][1] 0.009649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000685 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 600 600 FAD FAD . F 2 FAD B 1 600 600 FAD FAD . G 2 FAD C 1 600 600 FAD FAD . H 2 FAD D 1 600 600 FAD FAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 49.391 49.075 63.333 1 33.73 ? PA FAD 600 A 1 HETATM 2 O O1A FAD . . . E 2 48.883 48.369 61.978 1 32.32 ? O1A FAD 600 A 1 HETATM 3 O O2A FAD . . . E 2 50.348 48.23 64.082 1 33.56 ? O2A FAD 600 A 1 HETATM 4 O O5B FAD . . . E 2 50.013 50.492 62.892 1 34.52 ? O5B FAD 600 A 1 HETATM 5 C C5B FAD . . . E 2 49.37 51.265 61.876 1 30.33 ? C5B FAD 600 A 1 HETATM 6 C C4B FAD . . . E 2 50.345 52.224 61.187 1 30.78 ? C4B FAD 600 A 1 HETATM 7 O O4B FAD . . . E 2 51.067 52.934 62.209 1 30.98 ? O4B FAD 600 A 1 HETATM 8 C C3B FAD . . . E 2 51.394 51.462 60.376 1 30.47 ? C3B FAD 600 A 1 HETATM 9 O O3B FAD . . . E 2 51.822 52.255 59.267 1 31.14 ? O3B FAD 600 A 1 HETATM 10 C C2B FAD . . . E 2 52.53 51.309 61.385 1 31.09 ? C2B FAD 600 A 1 HETATM 11 O O2B FAD . . . E 2 53.767 51.196 60.677 1 30.76 ? O2B FAD 600 A 1 HETATM 12 C C1B FAD . . . E 2 52.472 52.691 62.031 1 32.46 ? C1B FAD 600 A 1 HETATM 13 N N9A FAD . . . E 2 53.137 52.681 63.352 1 31.42 ? N9A FAD 600 A 1 HETATM 14 C C8A FAD . . . E 2 52.654 52.109 64.453 1 31.85 ? C8A FAD 600 A 1 HETATM 15 N N7A FAD . . . E 2 53.458 52.357 65.484 1 32.94 ? N7A FAD 600 A 1 HETATM 16 C C5A FAD . . . E 2 54.469 53.093 65.034 1 31.27 ? C5A FAD 600 A 1 HETATM 17 C C6A FAD . . . E 2 55.58 53.677 65.63 1 31.98 ? C6A FAD 600 A 1 HETATM 18 N N6A FAD . . . E 2 55.824 53.497 66.926 1 31.99 ? N6A FAD 600 A 1 HETATM 19 N N1A FAD . . . E 2 56.409 54.415 64.877 1 30.93 ? N1A FAD 600 A 1 HETATM 20 C C2A FAD . . . E 2 56.187 54.59 63.585 1 32.35 ? C2A FAD 600 A 1 HETATM 21 N N3A FAD . . . E 2 55.142 54.045 62.986 1 30.88 ? N3A FAD 600 A 1 HETATM 22 C C4A FAD . . . E 2 54.269 53.299 63.676 1 32.02 ? C4A FAD 600 A 1 HETATM 23 N N1 FAD . . . E 2 41.022 54.823 64.978 1 42.83 ? N1 FAD 600 A 1 HETATM 24 C C2 FAD . . . E 2 40.616 56.008 65.602 1 42.98 ? C2 FAD 600 A 1 HETATM 25 O O2 FAD . . . E 2 41.048 57.091 65.209 1 41.33 ? O2 FAD 600 A 1 HETATM 26 N N3 FAD . . . E 2 39.702 55.947 66.66 1 43.39 ? N3 FAD 600 A 1 HETATM 27 C C4 FAD . . . E 2 39.204 54.707 67.083 1 43.03 ? C4 FAD 600 A 1 HETATM 28 O O4 FAD . . . E 2 38.425 54.658 68.034 1 42.49 ? O4 FAD 600 A 1 HETATM 29 C C4X FAD . . . E 2 39.607 53.533 66.457 1 41.54 ? C4X FAD 600 A 1 HETATM 30 N N5 FAD . . . E 2 39.125 52.347 66.86 1 41.11 ? N5 FAD 600 A 1 HETATM 31 C C5X FAD . . . E 2 39.498 51.189 66.297 1 40.25 ? C5X FAD 600 A 1 HETATM 32 C C6 FAD . . . E 2 39.035 49.986 66.821 1 40.59 ? C6 FAD 600 A 1 HETATM 33 C C7 FAD . . . E 2 39.5 48.776 66.317 1 39.57 ? C7 FAD 600 A 1 HETATM 34 C C7M FAD . . . E 2 38.895 47.474 66.847 1 39.28 ? C7M FAD 600 A 1 HETATM 35 C C8 FAD . . . E 2 40.443 48.765 65.291 1 39.14 ? C8 FAD 600 A 1 HETATM 36 C C8M FAD . . . E 2 41.083 47.455 64.825 1 38.73 ? C8M FAD 600 A 1 HETATM 37 C C9 FAD . . . E 2 40.887 49.968 64.751 1 38.03 ? C9 FAD 600 A 1 HETATM 38 C C9A FAD . . . E 2 40.415 51.179 65.25 1 40.32 ? C9A FAD 600 A 1 HETATM 39 N N10 FAD . . . E 2 40.888 52.404 64.762 1 40.35 ? N10 FAD 600 A 1 HETATM 40 C C10 FAD . . . E 2 40.512 53.591 65.404 1 41.69 ? C10 FAD 600 A 1 HETATM 41 C C1' FAD . . . E 2 41.829 52.458 63.621 1 39.02 ? C1' FAD 600 A 1 HETATM 42 C C2' FAD . . . E 2 43.28 52.336 64.086 1 39.94 ? C2' FAD 600 A 1 HETATM 43 O O2' FAD . . . E 2 43.528 53.3 65.112 1 36.87 ? O2' FAD 600 A 1 HETATM 44 C C3' FAD . . . E 2 44.228 52.555 62.906 1 35.67 ? C3' FAD 600 A 1 HETATM 45 O O3' FAD . . . E 2 44.046 51.524 61.931 1 33.81 ? O3' FAD 600 A 1 HETATM 46 C C4' FAD . . . E 2 45.689 52.602 63.353 1 33.49 ? C4' FAD 600 A 1 HETATM 47 O O4' FAD . . . E 2 46.521 52.687 62.194 1 35.72 ? O4' FAD 600 A 1 HETATM 48 C C5' FAD . . . E 2 46.086 51.361 64.154 1 31.7 ? C5' FAD 600 A 1 HETATM 49 O O5' FAD . . . E 2 47.437 51.459 64.609 1 34.83 ? O5' FAD 600 A 1 HETATM 50 P P FAD . . . E 2 48.047 50.267 65.497 1 34.45 ? P FAD 600 A 1 HETATM 51 O O1P FAD . . . E 2 49.495 50.176 65.779 1 31.82 ? O1P FAD 600 A 1 HETATM 52 O O2P FAD . . . E 2 46.996 49.267 66.187 1 35.33 ? O2P FAD 600 A 1 HETATM 53 O O3P FAD . . . E 2 48.05 49.352 64.175 1 32.9 ? O3P FAD 600 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #