data_2BXM # _model_server_result.job_id 7fsOHVNMQZqJpOlm604n8g _model_server_result.datetime_utc '2024-11-13 02:06:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2002}' # _entry.id 2BXM # _exptl.entry_id 2BXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.788 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description INDOMETHACIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.18 _cell.angle_gamma 90 _cell.entry_id 2BXM _cell.length_a 188.141 _cell.length_b 38.821 _cell.length_c 96.052 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'C19 H16 Cl N O4' _chem_comp.formula_weight 357.788 _chem_comp.id IMN _chem_comp.mon_nstd_flag . _chem_comp.name INDOMETHACIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 IMN doub 173 n y C C5 IMN sing 174 n y C N IMN sing 175 n y C1 C2 IMN sing 176 n y C1 C7 IMN sing 177 n y C2 C3 IMN doub 178 n y C2 H2 IMN sing 179 n n C3 C4 IMN sing 180 n y C3 O IMN sing 181 n n C4 C5 IMN doub 182 n y C4 H4 IMN sing 183 n n C5 H5 IMN sing 184 n n C6 O IMN sing 185 n n C6 H61 IMN sing 186 n n C6 H62 IMN sing 187 n n C6 H63 IMN sing 188 n n C7 C8 IMN doub 189 n y C7 C17 IMN sing 190 n n C8 C16 IMN sing 191 n n C8 N IMN sing 192 n y C9 C10 IMN sing 193 n n C9 N IMN sing 194 n n C9 O1 IMN doub 195 n n C10 C11 IMN doub 196 n y C10 C15 IMN sing 197 n y C11 C12 IMN sing 198 n y C11 H11 IMN sing 199 n n C12 C13 IMN doub 200 n y C12 H12 IMN sing 201 n n C13 C14 IMN sing 202 n y C13 CL IMN sing 203 n n C14 C15 IMN doub 204 n y C14 H14 IMN sing 205 n n C15 H15 IMN sing 206 n n C16 H161 IMN sing 207 n n C16 H162 IMN sing 208 n n C16 H163 IMN sing 209 n n C17 C18 IMN sing 210 n n C17 H171 IMN sing 211 n n C17 H172 IMN sing 212 n n C18 O2 IMN doub 213 n n C18 O3 IMN sing 214 n n O3 HO3 IMN sing 215 n n # _atom_sites.entry_id 2BXM _atom_sites.fract_transf_matrix[1][1] 0.005315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001442 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025759 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 1001 1001 MYR MYR . C 2 MYR A 1 1002 1002 MYR MYR . D 2 MYR A 1 1003 1003 MYR MYR . E 2 MYR A 1 1004 1004 MYR MYR . F 2 MYR A 1 1005 1005 MYR MYR . G 2 MYR A 1 1006 1006 MYR MYR . H 2 MYR A 1 1007 1007 MYR MYR . I 3 IMN A 1 2001 2001 IMN IMN . J 3 IMN A 1 2002 2002 IMN IMN . K 4 HOH A 1 1998 1998 HOH HOH . K 4 HOH A 2 1999 1999 HOH HOH . K 4 HOH A 3 2003 2003 HOH HOH . K 4 HOH A 4 2004 2004 HOH HOH . K 4 HOH A 5 2005 2005 HOH HOH . K 4 HOH A 6 2006 2006 HOH HOH . K 4 HOH A 7 2007 2007 HOH HOH . K 4 HOH A 8 2008 2008 HOH HOH . K 4 HOH A 9 2009 2009 HOH HOH . K 4 HOH A 10 2010 2010 HOH HOH . K 4 HOH A 11 2011 2011 HOH HOH . K 4 HOH A 12 2012 2012 HOH HOH . K 4 HOH A 13 2013 2013 HOH HOH . K 4 HOH A 14 2014 2014 HOH HOH . K 4 HOH A 15 2015 2015 HOH HOH . K 4 HOH A 16 2016 2016 HOH HOH . K 4 HOH A 17 2017 2017 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C IMN . . . J 3 28.392 8.07 32.353 1 107.79 ? C IMN 2002 A 1 HETATM 2 C C1 IMN . . . J 3 28.764 7.579 33.631 1 108.67 ? C1 IMN 2002 A 1 HETATM 3 C C2 IMN . . . J 3 27.771 7.292 34.627 1 109.84 ? C2 IMN 2002 A 1 HETATM 4 C C3 IMN . . . J 3 26.41 7.505 34.309 1 110.03 ? C3 IMN 2002 A 1 HETATM 5 C C4 IMN . . . J 3 26.051 8.001 33.016 1 109.48 ? C4 IMN 2002 A 1 HETATM 6 C C5 IMN . . . J 3 27.021 8.285 32.039 1 108.5 ? C5 IMN 2002 A 1 HETATM 7 C C6 IMN . . . J 3 25.502 6.661 36.429 1 111.03 ? C6 IMN 2002 A 1 HETATM 8 C C7 IMN . . . J 3 30.193 7.458 33.653 1 108.35 ? C7 IMN 2002 A 1 HETATM 9 C C8 IMN . . . J 3 30.7 7.853 32.457 1 107.22 ? C8 IMN 2002 A 1 HETATM 10 C C9 IMN . . . J 3 29.669 8.716 30.234 1 102.87 ? C9 IMN 2002 A 1 HETATM 11 C C10 IMN . . . J 3 30.563 9.866 29.884 1 98.81 ? C10 IMN 2002 A 1 HETATM 12 C C11 IMN . . . J 3 30.553 11.056 30.667 1 95.77 ? C11 IMN 2002 A 1 HETATM 13 C C12 IMN . . . J 3 31.4 12.122 30.324 1 93.2 ? C12 IMN 2002 A 1 HETATM 14 C C13 IMN . . . J 3 32.245 11.996 29.209 1 92.98 ? C13 IMN 2002 A 1 HETATM 15 C C14 IMN . . . J 3 32.265 10.834 28.43 1 93.72 ? C14 IMN 2002 A 1 HETATM 16 C C15 IMN . . . J 3 31.429 9.781 28.77 1 96 ? C15 IMN 2002 A 1 HETATM 17 C C16 IMN . . . J 3 32.136 7.881 32.053 1 107.36 ? C16 IMN 2002 A 1 HETATM 18 C C17 IMN . . . J 3 30.962 6.957 34.838 1 109.19 ? C17 IMN 2002 A 1 HETATM 19 C C18 IMN . . . J 3 30.914 5.446 34.949 1 109.58 ? C18 IMN 2002 A 1 HETATM 20 N N IMN . . . J 3 29.596 8.245 31.601 1 106.03 ? N IMN 2002 A 1 HETATM 21 O O IMN . . . J 3 25.319 7.275 35.148 1 110.68 ? O IMN 2002 A 1 HETATM 22 O O1 IMN . . . J 3 29.019 8.15 29.38 1 103.08 ? O1 IMN 2002 A 1 HETATM 23 O O2 IMN . . . J 3 31.378 4.814 33.903 1 109.88 ? O2 IMN 2002 A 1 HETATM 24 O O3 IMN . . . J 3 30.467 4.872 35.918 1 109.86 ? O3 IMN 2002 A 1 HETATM 25 CL CL IMN . . . J 3 33.289 13.293 28.774 1 90.26 ? CL IMN 2002 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #