data_2BXP # _model_server_result.job_id 9eU6YQ0dyoQ7HQqHzQsvLQ _model_server_result.datetime_utc '2024-11-22 12:10:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bxp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":3001}' # _entry.id 2BXP # _exptl.entry_id 2BXP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.374 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.16 _cell.angle_gamma 90 _cell.entry_id 2BXP _cell.length_a 186.654 _cell.length_b 38.757 _cell.length_c 95.888 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BXP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C19 H20 N2 O2' _chem_comp.formula_weight 308.374 _chem_comp.id P1Z _chem_comp.mon_nstd_flag . _chem_comp.name 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 P1Z doub 280 n y C16 C15 P1Z sing 281 n y C16 H16 P1Z sing 282 n n C17 C12 P1Z sing 283 n y C17 H17 P1Z sing 284 n n C12 C13 P1Z doub 285 n y C12 N2 P1Z sing 286 n n C13 C14 P1Z sing 287 n y C13 H13 P1Z sing 288 n n C14 C15 P1Z doub 289 n y C14 H14 P1Z sing 290 n n C15 H15 P1Z sing 291 n n C8 C9 P1Z doub 292 n y C8 C7 P1Z sing 293 n y C8 H8 P1Z sing 294 n n C9 C10 P1Z sing 295 n y C9 H9 P1Z sing 296 n n C10 C11 P1Z doub 297 n y C10 H10 P1Z sing 298 n n C11 C6 P1Z sing 299 n y C11 H11 P1Z sing 300 n n C6 C7 P1Z doub 301 n y C6 N1 P1Z sing 302 n n C7 H7 P1Z sing 303 n n C21 C20 P1Z sing 304 n n C21 H211 P1Z sing 305 n n C21 H212 P1Z sing 306 n n C21 H213 P1Z sing 307 n n C20 C19 P1Z sing 308 n n C20 H201 P1Z sing 309 n n C20 H202 P1Z sing 310 n n C19 C18 P1Z sing 311 n n C19 H191 P1Z sing 312 n n C19 H192 P1Z sing 313 n n C18 C4 P1Z sing 314 n n C18 H181 P1Z sing 315 n n C18 H182 P1Z sing 316 n n N2 C3 P1Z sing 317 n n N2 N1 P1Z sing 318 n n C3 C4 P1Z sing 319 n n C3 O3 P1Z doub 320 n n C4 C5 P1Z sing 321 n n C4 H4 P1Z sing 322 n n C5 N1 P1Z sing 323 n n C5 O5 P1Z doub 324 n n # _atom_sites.entry_id 2BXP _atom_sites.fract_transf_matrix[1][1] 0.005358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001452 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025802 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 1001 1001 MYR MYR . C 2 MYR A 1 1002 1002 MYR MYR . D 2 MYR A 1 1003 1003 MYR MYR . E 2 MYR A 1 1004 1004 MYR MYR . F 2 MYR A 1 1005 1005 MYR MYR . G 2 MYR A 1 1006 1006 MYR MYR . H 2 MYR A 1 1009 1009 MYR MYR . I 3 P1Z A 1 3001 3001 P1Z P1Z . J 4 HOH A 1 2001 2001 HOH HOH . J 4 HOH A 2 2002 2002 HOH HOH . J 4 HOH A 3 2003 2003 HOH HOH . J 4 HOH A 4 2004 2004 HOH HOH . J 4 HOH A 5 2005 2005 HOH HOH . J 4 HOH A 6 2006 2006 HOH HOH . J 4 HOH A 7 2007 2007 HOH HOH . J 4 HOH A 8 2008 2008 HOH HOH . J 4 HOH A 9 2009 2009 HOH HOH . J 4 HOH A 10 2010 2010 HOH HOH . J 4 HOH A 11 2011 2011 HOH HOH . J 4 HOH A 12 2012 2012 HOH HOH . J 4 HOH A 13 2013 2013 HOH HOH . J 4 HOH A 14 2014 2014 HOH HOH . J 4 HOH A 15 2015 2015 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C16 P1Z . . . I 3 38.273 14.438 9.384 1 56.72 ? C16 P1Z 3001 A 1 HETATM 2 C C17 P1Z . . . I 3 36.924 14.047 9.247 1 55.49 ? C17 P1Z 3001 A 1 HETATM 3 C C12 P1Z . . . I 3 35.886 15.017 9.204 1 56.88 ? C12 P1Z 3001 A 1 HETATM 4 C C13 P1Z . . . I 3 36.242 16.402 9.3 1 55.97 ? C13 P1Z 3001 A 1 HETATM 5 C C14 P1Z . . . I 3 37.596 16.776 9.433 1 56.45 ? C14 P1Z 3001 A 1 HETATM 6 C C15 P1Z . . . I 3 38.605 15.803 9.474 1 55.55 ? C15 P1Z 3001 A 1 HETATM 7 C C8 P1Z . . . I 3 33.311 17.559 5.4 1 57.39 ? C8 P1Z 3001 A 1 HETATM 8 C C9 P1Z . . . I 3 33.832 16.71 4.419 1 57.61 ? C9 P1Z 3001 A 1 HETATM 9 C C10 P1Z . . . I 3 34.264 15.42 4.774 1 59.97 ? C10 P1Z 3001 A 1 HETATM 10 C C11 P1Z . . . I 3 34.173 14.976 6.129 1 60.22 ? C11 P1Z 3001 A 1 HETATM 11 C C6 P1Z . . . I 3 33.64 15.854 7.113 1 58.5 ? C6 P1Z 3001 A 1 HETATM 12 C C7 P1Z . . . I 3 33.206 17.155 6.743 1 58.31 ? C7 P1Z 3001 A 1 HETATM 13 C C21 P1Z . . . I 3 30.619 10.084 9.512 1 66.64 ? C21 P1Z 3001 A 1 HETATM 14 C C20 P1Z . . . I 3 30.449 11.146 10.535 1 65.52 ? C20 P1Z 3001 A 1 HETATM 15 C C19 P1Z . . . I 3 30.54 12.522 10.029 1 63.04 ? C19 P1Z 3001 A 1 HETATM 16 C C18 P1Z . . . I 3 31.435 13.493 10.879 1 62.04 ? C18 P1Z 3001 A 1 HETATM 17 N N2 P1Z . . . I 3 34.52 14.576 9.046 1 58.98 ? N2 P1Z 3001 A 1 HETATM 18 C C3 P1Z . . . I 3 33.843 13.731 10.001 1 59.21 ? C3 P1Z 3001 A 1 HETATM 19 C C4 P1Z . . . I 3 32.51 14.114 10.03 1 59.47 ? C4 P1Z 3001 A 1 HETATM 20 C C5 P1Z . . . I 3 32.29 15.164 9.15 1 58.81 ? C5 P1Z 3001 A 1 HETATM 21 N N1 P1Z . . . I 3 33.528 15.491 8.521 1 59.13 ? N1 P1Z 3001 A 1 HETATM 22 O O3 P1Z . . . I 3 34.454 12.835 10.637 1 62.14 ? O3 P1Z 3001 A 1 HETATM 23 O O5 P1Z . . . I 3 31.227 15.793 8.889 1 57.6 ? O5 P1Z 3001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 1222 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 23 #