data_2BXQ # _model_server_result.job_id ksyc-z7m_BWCM0no-BL2uA _model_server_result.datetime_utc '2024-11-22 12:32:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2002}' # _entry.id 2BXQ # _exptl.entry_id 2BXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.374 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.89 _cell.angle_gamma 90 _cell.entry_id 2BXQ _cell.length_a 188.25 _cell.length_b 38.824 _cell.length_c 95.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C19 H20 N2 O2' _chem_comp.formula_weight 308.374 _chem_comp.id P1Z _chem_comp.mon_nstd_flag . _chem_comp.name 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 P1Z doub 323 n y C16 C15 P1Z sing 324 n y C16 H16 P1Z sing 325 n n C17 C12 P1Z sing 326 n y C17 H17 P1Z sing 327 n n C12 C13 P1Z doub 328 n y C12 N2 P1Z sing 329 n n C13 C14 P1Z sing 330 n y C13 H13 P1Z sing 331 n n C14 C15 P1Z doub 332 n y C14 H14 P1Z sing 333 n n C15 H15 P1Z sing 334 n n C8 C9 P1Z doub 335 n y C8 C7 P1Z sing 336 n y C8 H8 P1Z sing 337 n n C9 C10 P1Z sing 338 n y C9 H9 P1Z sing 339 n n C10 C11 P1Z doub 340 n y C10 H10 P1Z sing 341 n n C11 C6 P1Z sing 342 n y C11 H11 P1Z sing 343 n n C6 C7 P1Z doub 344 n y C6 N1 P1Z sing 345 n n C7 H7 P1Z sing 346 n n C21 C20 P1Z sing 347 n n C21 H211 P1Z sing 348 n n C21 H212 P1Z sing 349 n n C21 H213 P1Z sing 350 n n C20 C19 P1Z sing 351 n n C20 H201 P1Z sing 352 n n C20 H202 P1Z sing 353 n n C19 C18 P1Z sing 354 n n C19 H191 P1Z sing 355 n n C19 H192 P1Z sing 356 n n C18 C4 P1Z sing 357 n n C18 H181 P1Z sing 358 n n C18 H182 P1Z sing 359 n n N2 C3 P1Z sing 360 n n N2 N1 P1Z sing 361 n n C3 C4 P1Z sing 362 n n C3 O3 P1Z doub 363 n n C4 C5 P1Z sing 364 n n C4 H4 P1Z sing 365 n n C5 N1 P1Z sing 366 n n C5 O5 P1Z doub 367 n n # _atom_sites.entry_id 2BXQ _atom_sites.fract_transf_matrix[1][1] 0.005312 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001412 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010801 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 1001 1001 MYR MYR . C 2 MYR A 1 1002 1002 MYR MYR . D 2 MYR A 1 1003 1003 MYR MYR . E 2 MYR A 1 1004 1004 MYR MYR . F 2 MYR A 1 1005 1005 MYR MYR . G 2 MYR A 1 1006 1006 MYR MYR . H 3 IMN A 1 2001 2001 IMN IMN . I 4 P1Z A 1 2002 2002 P1Z P1Z . J 3 IMN A 1 2003 2003 IMN IMN . K 5 HOH A 1 1997 1997 HOH HOH . K 5 HOH A 2 1998 1998 HOH HOH . K 5 HOH A 3 1999 1999 HOH HOH . K 5 HOH A 4 2004 2004 HOH HOH . K 5 HOH A 5 2005 2005 HOH HOH . K 5 HOH A 6 2006 2006 HOH HOH . K 5 HOH A 7 2007 2007 HOH HOH . K 5 HOH A 8 2008 2008 HOH HOH . K 5 HOH A 9 2009 2009 HOH HOH . K 5 HOH A 10 2010 2010 HOH HOH . K 5 HOH A 11 2011 2011 HOH HOH . K 5 HOH A 12 2012 2012 HOH HOH . K 5 HOH A 13 2013 2013 HOH HOH . K 5 HOH A 14 2014 2014 HOH HOH . K 5 HOH A 15 2015 2015 HOH HOH . K 5 HOH A 16 2016 2016 HOH HOH . K 5 HOH A 17 2017 2017 HOH HOH . K 5 HOH A 18 2018 2018 HOH HOH . K 5 HOH A 19 2019 2019 HOH HOH . K 5 HOH A 20 2020 2020 HOH HOH . K 5 HOH A 21 2021 2021 HOH HOH . K 5 HOH A 22 2022 2022 HOH HOH . K 5 HOH A 23 2023 2023 HOH HOH . K 5 HOH A 24 2024 2024 HOH HOH . K 5 HOH A 25 2025 2025 HOH HOH . K 5 HOH A 26 2026 2026 HOH HOH . K 5 HOH A 27 2027 2027 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C16 P1Z . . . I 4 38.333 14.851 9.079 1 61.7 ? C16 P1Z 2002 A 1 HETATM 2 C C17 P1Z . . . I 4 36.984 14.501 9.054 1 59.12 ? C17 P1Z 2002 A 1 HETATM 3 C C12 P1Z . . . I 4 35.958 15.421 9.399 1 59.41 ? C12 P1Z 2002 A 1 HETATM 4 C C13 P1Z . . . I 4 36.321 16.747 9.78 1 59.44 ? C13 P1Z 2002 A 1 HETATM 5 C C14 P1Z . . . I 4 37.698 17.095 9.798 1 61.66 ? C14 P1Z 2002 A 1 HETATM 6 C C15 P1Z . . . I 4 38.699 16.153 9.45 1 61.8 ? C15 P1Z 2002 A 1 HETATM 7 C C8 P1Z . . . I 4 33.184 18.251 6.124 1 58.8 ? C8 P1Z 2002 A 1 HETATM 8 C C9 P1Z . . . I 4 33.631 17.52 5.009 1 59.11 ? C9 P1Z 2002 A 1 HETATM 9 C C10 P1Z . . . I 4 34.047 16.185 5.172 1 58.8 ? C10 P1Z 2002 A 1 HETATM 10 C C11 P1Z . . . I 4 34.022 15.585 6.464 1 58.87 ? C11 P1Z 2002 A 1 HETATM 11 C C6 P1Z . . . I 4 33.575 16.347 7.574 1 57.71 ? C6 P1Z 2002 A 1 HETATM 12 C C7 P1Z . . . I 4 33.152 17.686 7.403 1 56.55 ? C7 P1Z 2002 A 1 HETATM 13 C C21 P1Z . . . I 4 30.854 9.761 10.706 1 65.72 ? C21 P1Z 2002 A 1 HETATM 14 C C20 P1Z . . . I 4 30.833 11.141 11.246 1 64.94 ? C20 P1Z 2002 A 1 HETATM 15 C C19 P1Z . . . I 4 31.426 12.144 10.374 1 61.05 ? C19 P1Z 2002 A 1 HETATM 16 C C18 P1Z . . . I 4 31.739 13.488 11.08 1 60.62 ? C18 P1Z 2002 A 1 HETATM 17 N N2 P1Z . . . I 4 34.62 14.95 9.309 1 60.09 ? N2 P1Z 2002 A 1 HETATM 18 C C3 P1Z . . . I 4 34.076 13.972 10.192 1 60.74 ? C3 P1Z 2002 A 1 HETATM 19 C C4 P1Z . . . I 4 32.719 14.247 10.284 1 59.98 ? C4 P1Z 2002 A 1 HETATM 20 C C5 P1Z . . . I 4 32.385 15.341 9.529 1 57.94 ? C5 P1Z 2002 A 1 HETATM 21 N N1 P1Z . . . I 4 33.549 15.826 8.911 1 58.61 ? N1 P1Z 2002 A 1 HETATM 22 O O3 P1Z . . . I 4 34.781 13.065 10.723 1 63.69 ? O3 P1Z 2002 A 1 HETATM 23 O O5 P1Z . . . I 4 31.28 15.895 9.354 1 57.8 ? O5 P1Z 2002 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 23 #