data_2BXR # _model_server_result.job_id 4YIdL6I5TUBlnHTr79yHUg _model_server_result.datetime_utc '2024-11-22 23:17:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 2BXR # _exptl.entry_id 2BXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.18 _cell.angle_gamma 90 _cell.entry_id 2BXR _cell.length_a 143.493 _cell.length_b 109.599 _cell.length_c 81.329 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 321 A CYS 321 1_555 A SG CYS 323 A CYS 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf2 B SG CYS 321 B CYS 321 1_555 B SG CYS 323 B CYS 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? covale ? covale1 A SG CYS 406 A CYS 406 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.746 ? covale ? covale2 C C5X FAD . A FAD 600 1_555 D C16 MLG . A MLG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale3 C N5 FAD . A FAD 600 1_555 D C16 MLG . A MLG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? covale ? covale4 B SG CYS 406 B CYS 406 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? covale ? covale5 E N5 FAD . B FAD 600 1_555 F C16 MLG . B MLG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.528 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2BXR _atom_sites.fract_transf_matrix[1][1] 0.006969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000632 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 MLG A 1 601 601 MLG MLG . E 2 FAD B 1 600 600 FAD FAD . F 3 MLG B 1 601 601 MLG MLG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 38.179 5.361 8.928 1 63.44 ? PA FAD 600 A 1 HETATM 2 O O1A FAD . . . C 2 38.463 5.51 7.473 1 64.17 ? O1A FAD 600 A 1 HETATM 3 O O2A FAD . . . C 2 36.876 6.169 9.307 1 64.96 ? O2A FAD 600 A 1 HETATM 4 O O5B FAD . . . C 2 39.415 5.958 9.741 1 65.03 ? O5B FAD 600 A 1 HETATM 5 C C5B FAD . . . C 2 40.725 5.902 9.231 1 65.73 ? C5B FAD 600 A 1 HETATM 6 C C4B FAD . . . C 2 41.511 7.208 9.48 1 67.85 ? C4B FAD 600 A 1 HETATM 7 O O4B FAD . . . C 2 42.889 7.098 9.083 1 66.69 ? O4B FAD 600 A 1 HETATM 8 C C3B FAD . . . C 2 41.007 8.45 8.716 1 68.87 ? C3B FAD 600 A 1 HETATM 9 O O3B FAD . . . C 2 40.943 9.657 9.508 1 70.63 ? O3B FAD 600 A 1 HETATM 10 C C2B FAD . . . C 2 42.04 8.658 7.627 1 67.57 ? C2B FAD 600 A 1 HETATM 11 O O2B FAD . . . C 2 42.044 10.017 7.259 1 67.72 ? O2B FAD 600 A 1 HETATM 12 C C1B FAD . . . C 2 43.306 8.238 8.352 1 65.34 ? C1B FAD 600 A 1 HETATM 13 N N9A FAD . . . C 2 44.446 7.834 7.511 1 64.89 ? N9A FAD 600 A 1 HETATM 14 C C8A FAD . . . C 2 44.447 7.209 6.287 1 64.32 ? C8A FAD 600 A 1 HETATM 15 N N7A FAD . . . C 2 45.714 7 5.865 1 64.37 ? N7A FAD 600 A 1 HETATM 16 C C5A FAD . . . C 2 46.548 7.463 6.811 1 64.81 ? C5A FAD 600 A 1 HETATM 17 C C6A FAD . . . C 2 47.94 7.498 6.911 1 64.4 ? C6A FAD 600 A 1 HETATM 18 N N6A FAD . . . C 2 48.664 6.508 6.407 1 65.62 ? N6A FAD 600 A 1 HETATM 19 N N1A FAD . . . C 2 48.491 8.057 8.027 1 64.75 ? N1A FAD 600 A 1 HETATM 20 C C2A FAD . . . C 2 47.719 8.567 9.043 1 64.56 ? C2A FAD 600 A 1 HETATM 21 N N3A FAD . . . C 2 46.358 8.541 8.941 1 65.4 ? N3A FAD 600 A 1 HETATM 22 C C4A FAD . . . C 2 45.767 7.987 7.844 1 65.65 ? C4A FAD 600 A 1 HETATM 23 N N1 FAD . . . C 2 28.771 3.41 9.249 1 68.69 ? N1 FAD 600 A 1 HETATM 24 C C2 FAD . . . C 2 27.853 3.306 10.178 1 69.16 ? C2 FAD 600 A 1 HETATM 25 O O2 FAD . . . C 2 28.053 2.783 11.279 1 71.98 ? O2 FAD 600 A 1 HETATM 26 N N3 FAD . . . C 2 26.556 3.8 9.9 1 67.65 ? N3 FAD 600 A 1 HETATM 27 C C4 FAD . . . C 2 26.201 4.361 8.651 1 67.9 ? C4 FAD 600 A 1 HETATM 28 O O4 FAD . . . C 2 24.974 4.749 8.271 1 69.46 ? O4 FAD 600 A 1 HETATM 29 C C4X FAD . . . C 2 27.015 4.439 7.706 1 68.64 ? C4X FAD 600 A 1 HETATM 30 N N5 FAD . . . C 2 26.834 5.017 6.437 1 69.88 ? N5 FAD 600 A 1 HETATM 31 C C5X FAD . . . C 2 27.944 5.192 5.604 1 66.62 ? C5X FAD 600 A 1 HETATM 32 C C6 FAD . . . C 2 27.93 6.033 4.497 1 64.35 ? C6 FAD 600 A 1 HETATM 33 C C7 FAD . . . C 2 29.105 6.629 3.895 1 62.31 ? C7 FAD 600 A 1 HETATM 34 C C7M FAD . . . C 2 28.879 7.557 2.714 1 61.51 ? C7M FAD 600 A 1 HETATM 35 C C8 FAD . . . C 2 30.377 6.379 4.376 1 63.53 ? C8 FAD 600 A 1 HETATM 36 C C8M FAD . . . C 2 31.805 7.079 3.718 1 63.34 ? C8M FAD 600 A 1 HETATM 37 C C9 FAD . . . C 2 30.411 5.551 5.477 1 64.75 ? C9 FAD 600 A 1 HETATM 38 C C9A FAD . . . C 2 29.19 4.922 6.095 1 65.61 ? C9A FAD 600 A 1 HETATM 39 N N10 FAD . . . C 2 29.282 3.988 7.023 1 67.88 ? N10 FAD 600 A 1 HETATM 40 C C10 FAD . . . C 2 28.283 3.953 7.988 1 68.89 ? C10 FAD 600 A 1 HETATM 41 C C1' FAD . . . C 2 30.597 3.287 7.319 1 65.97 ? C1' FAD 600 A 1 HETATM 42 C C2' FAD . . . C 2 31.402 3.626 8.445 1 66.52 ? C2' FAD 600 A 1 HETATM 43 O O2' FAD . . . C 2 31.477 5.064 8.293 1 66.44 ? O2' FAD 600 A 1 HETATM 44 C C3' FAD . . . C 2 32.803 2.995 8.456 1 66.95 ? C3' FAD 600 A 1 HETATM 45 O O3' FAD . . . C 2 32.51 1.564 8.655 1 72.34 ? O3' FAD 600 A 1 HETATM 46 C C4' FAD . . . C 2 33.696 3.476 9.616 1 65.23 ? C4' FAD 600 A 1 HETATM 47 O O4' FAD . . . C 2 33.553 4.892 9.797 1 64.64 ? O4' FAD 600 A 1 HETATM 48 C C5' FAD . . . C 2 35.132 3.107 9.428 1 61.69 ? C5' FAD 600 A 1 HETATM 49 O O5' FAD . . . C 2 35.876 3.703 10.431 1 62.54 ? O5' FAD 600 A 1 HETATM 50 P P FAD . . . C 2 37.42 3.433 10.795 1 62.83 ? P FAD 600 A 1 HETATM 51 O O1P FAD . . . C 2 38.321 4.061 11.725 1 65.21 ? O1P FAD 600 A 1 HETATM 52 O O2P FAD . . . C 2 37.856 1.985 11.015 1 64.03 ? O2P FAD 600 A 1 HETATM 53 O O3P FAD . . . C 2 38.193 3.8 9.423 1 63.28 ? O3P FAD 600 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #