data_2BZA # _model_server_result.job_id R9y25EuaAlY65gazytJ63Q _model_server_result.datetime_utc '2024-11-26 07:33:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bza # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 2BZA # _exptl.entry_id 2BZA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 107.153 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BENZYLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2BZA _cell.length_a 63.401 _cell.length_b 63.722 _cell.length_c 69.174 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BZA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 B CA CA . A CA 1 1_555 A OE1 GLU 52 A GLU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc2 B CA CA . A CA 1 1_555 A O ASN 54 A ASN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc3 B CA CA . A CA 1 1_555 A O VAL 57 A VAL 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc4 B CA CA . A CA 1 1_555 A OE2 GLU 62 A GLU 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc5 B CA CA . A CA 1 1_555 F O HOH . A HOH 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc6 B CA CA . A CA 1 1_555 F O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? # _chem_comp.formula 'C7 H9 N' _chem_comp.formula_weight 107.153 _chem_comp.id ABN _chem_comp.mon_nstd_flag . _chem_comp.name BENZYLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C ABN sing 1 n n N HN1 ABN sing 2 n n N HN2 ABN sing 3 n n C C1 ABN sing 4 n n C H1 ABN sing 5 n n C H2A ABN sing 6 n n C1 C2 ABN doub 7 n y C1 C6 ABN sing 8 n y C2 C3 ABN sing 9 n y C2 H2 ABN sing 10 n n C3 C4 ABN doub 11 n y C3 H3 ABN sing 12 n n C4 C5 ABN sing 13 n y C4 H4 ABN sing 14 n n C5 C6 ABN doub 15 n y C5 H5 ABN sing 16 n n C6 H6 ABN sing 17 n n # _atom_sites.entry_id 2BZA _atom_sites.fract_transf_matrix[1][1] 0.015773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014456 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1 1 CA CA . C 3 CL A 1 2 2 CL CL . D 4 SO4 A 1 702 3 SO4 SO4 . E 5 ABN A 1 703 1 ABN BEN . F 6 HOH A 1 704 3 HOH HOH . F 6 HOH A 2 705 4 HOH HOH . F 6 HOH A 3 706 5 HOH HOH . F 6 HOH A 4 707 6 HOH HOH . F 6 HOH A 5 708 8 HOH HOH . F 6 HOH A 6 709 9 HOH HOH . F 6 HOH A 7 710 10 HOH HOH . F 6 HOH A 8 711 11 HOH HOH . F 6 HOH A 9 712 12 HOH HOH . F 6 HOH A 10 713 13 HOH HOH . F 6 HOH A 11 714 14 HOH HOH . F 6 HOH A 12 715 15 HOH HOH . F 6 HOH A 13 716 16 HOH HOH . F 6 HOH A 14 717 17 HOH HOH . F 6 HOH A 15 718 18 HOH HOH . F 6 HOH A 16 719 19 HOH HOH . F 6 HOH A 17 720 20 HOH HOH . F 6 HOH A 18 721 21 HOH HOH . F 6 HOH A 19 722 22 HOH HOH . F 6 HOH A 20 723 23 HOH HOH . F 6 HOH A 21 724 24 HOH HOH . F 6 HOH A 22 725 25 HOH HOH . F 6 HOH A 23 726 26 HOH HOH . F 6 HOH A 24 727 27 HOH HOH . F 6 HOH A 25 728 28 HOH HOH . F 6 HOH A 26 729 29 HOH HOH . F 6 HOH A 27 730 30 HOH HOH . F 6 HOH A 28 731 31 HOH HOH . F 6 HOH A 29 732 33 HOH HOH . F 6 HOH A 30 733 35 HOH HOH . F 6 HOH A 31 734 36 HOH HOH . F 6 HOH A 32 735 37 HOH HOH . F 6 HOH A 33 736 38 HOH HOH . F 6 HOH A 34 737 39 HOH HOH . F 6 HOH A 35 738 40 HOH HOH . F 6 HOH A 36 739 41 HOH HOH . F 6 HOH A 37 740 42 HOH HOH . F 6 HOH A 38 741 43 HOH HOH . F 6 HOH A 39 742 44 HOH HOH . F 6 HOH A 40 743 45 HOH HOH . F 6 HOH A 41 744 46 HOH HOH . F 6 HOH A 42 745 48 HOH HOH . F 6 HOH A 43 746 50 HOH HOH . F 6 HOH A 44 747 51 HOH HOH . F 6 HOH A 45 748 52 HOH HOH . F 6 HOH A 46 749 53 HOH HOH . F 6 HOH A 47 750 54 HOH HOH . F 6 HOH A 48 751 56 HOH HOH . F 6 HOH A 49 752 57 HOH HOH . F 6 HOH A 50 753 58 HOH HOH . F 6 HOH A 51 754 59 HOH HOH . F 6 HOH A 52 755 60 HOH HOH . F 6 HOH A 53 756 61 HOH HOH . F 6 HOH A 54 757 62 HOH HOH . F 6 HOH A 55 758 64 HOH HOH . F 6 HOH A 56 759 66 HOH HOH . F 6 HOH A 57 760 69 HOH HOH . F 6 HOH A 58 761 70 HOH HOH . F 6 HOH A 59 762 71 HOH HOH . F 6 HOH A 60 763 73 HOH HOH . F 6 HOH A 61 764 74 HOH HOH . F 6 HOH A 62 765 76 HOH HOH . F 6 HOH A 63 766 80 HOH HOH . F 6 HOH A 64 767 82 HOH HOH . F 6 HOH A 65 768 83 HOH HOH . F 6 HOH A 66 769 84 HOH HOH . F 6 HOH A 67 770 85 HOH HOH . F 6 HOH A 68 771 86 HOH HOH . F 6 HOH A 69 772 87 HOH HOH . F 6 HOH A 70 773 88 HOH HOH . F 6 HOH A 71 774 96 HOH HOH . F 6 HOH A 72 775 98 HOH HOH . F 6 HOH A 73 776 100 HOH HOH . F 6 HOH A 74 777 105 HOH HOH . F 6 HOH A 75 778 110 HOH HOH . F 6 HOH A 76 779 116 HOH HOH . F 6 HOH A 77 780 117 HOH HOH . F 6 HOH A 78 781 118 HOH HOH . F 6 HOH A 79 782 119 HOH HOH . F 6 HOH A 80 783 121 HOH HOH . F 6 HOH A 81 784 123 HOH HOH . F 6 HOH A 82 785 124 HOH HOH . F 6 HOH A 83 786 125 HOH HOH . F 6 HOH A 84 787 126 HOH HOH . F 6 HOH A 85 788 127 HOH HOH . F 6 HOH A 86 789 129 HOH HOH . F 6 HOH A 87 790 130 HOH HOH . F 6 HOH A 88 791 131 HOH HOH . F 6 HOH A 89 792 134 HOH HOH . F 6 HOH A 90 793 135 HOH HOH . F 6 HOH A 91 794 136 HOH HOH . F 6 HOH A 92 795 137 HOH HOH . F 6 HOH A 93 796 139 HOH HOH . F 6 HOH A 94 797 141 HOH HOH . F 6 HOH A 95 798 142 HOH HOH . F 6 HOH A 96 799 143 HOH HOH . F 6 HOH A 97 800 144 HOH HOH . F 6 HOH A 98 801 145 HOH HOH . F 6 HOH A 99 802 146 HOH HOH . F 6 HOH A 100 803 147 HOH HOH . F 6 HOH A 101 804 148 HOH HOH . F 6 HOH A 102 805 149 HOH HOH . F 6 HOH A 103 806 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ABN . . . E 5 -11.343 28.604 41.922 1 22.39 ? N ABN 703 A 1 HETATM 2 C C ABN . . . E 5 -12.446 27.894 42.128 1 22.97 ? C ABN 703 A 1 HETATM 3 C C1 ABN . . . E 5 -12.899 27.975 43.464 1 20.72 ? C1 ABN 703 A 1 HETATM 4 C C2 ABN . . . E 5 -14.195 28.474 43.797 1 18.3 ? C2 ABN 703 A 1 HETATM 5 C C3 ABN . . . E 5 -14.662 28.56 45.127 1 22.09 ? C3 ABN 703 A 1 HETATM 6 C C4 ABN . . . E 5 -13.843 28.146 46.174 1 19.67 ? C4 ABN 703 A 1 HETATM 7 C C5 ABN . . . E 5 -12.559 27.649 45.889 1 22.37 ? C5 ABN 703 A 1 HETATM 8 C C6 ABN . . . E 5 -12.09 27.562 44.558 1 21.93 ? C6 ABN 703 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 8 #