data_2BZJ # _model_server_result.job_id U_y1IcTdGliMnhx2epYRdQ _model_server_result.datetime_utc '2025-02-05 07:44:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2bzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1306}' # _entry.id 2BZJ # _exptl.entry_id 2BZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 569.508 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RUTHENIUM-PYRIDOCARBAZOLE-3 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2BZJ _cell.length_a 98.887 _cell.length_b 98.887 _cell.length_c 81.028 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H18 N3 O6 Ru' _chem_comp.formula_weight 569.508 _chem_comp.id ME3 _chem_comp.mon_nstd_flag . _chem_comp.name RUTHENIUM-PYRIDOCARBAZOLE-3 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C24 ME3 doub 218 n n C24 O4 ME3 sing 219 n n C24 C6 ME3 sing 220 n n O4 C25 ME3 sing 221 n n C25 C26 ME3 sing 222 n n C25 H251 ME3 sing 223 n n C25 H252 ME3 sing 224 n n C26 H261 ME3 sing 225 n n C26 H262 ME3 sing 226 n n C26 H263 ME3 sing 227 n n C6 C7 ME3 sing 228 n n C6 C5 ME3 sing 229 n n C6 RU1 ME3 sing 230 n n C7 C8 ME3 sing 231 n n C7 RU1 ME3 sing 232 n n C7 H7 ME3 sing 233 n n C8 C9 ME3 sing 234 n n C8 RU1 ME3 sing 235 n n C8 H8C1 ME3 sing 236 n n C9 C5 ME3 sing 237 n n C9 RU1 ME3 sing 238 n n C9 H9C1 ME3 sing 239 n n C5 RU1 ME3 sing 240 n n C5 H5C1 ME3 sing 241 n n RU1 C4 ME3 sing 242 n n RU1 N1 ME3 sing 243 n n RU1 N3 ME3 sing 244 n n C4 O3 ME3 trip 245 n n C4 H4C1 ME3 sing 246 n n N1 C10 ME3 sing 247 n y N1 C11 ME3 sing 248 n y C10 C3 ME3 sing 249 n y C10 C17 ME3 doub 250 n y C3 N3 ME3 sing 251 n y C3 C22 ME3 doub 252 n y N3 C2 ME3 doub 253 n y C22 C23 ME3 sing 254 n y C22 C21 ME3 sing 255 n y C23 C1 ME3 doub 256 n y C23 H23 ME3 sing 257 n n C1 C2 ME3 sing 258 n y C1 HA ME3 sing 259 n n C2 H2 ME3 sing 260 n n C21 C20 ME3 sing 261 n n C21 C18 ME3 doub 262 n y C20 O2 ME3 doub 263 n n C20 N2 ME3 sing 264 n n N2 C19 ME3 sing 265 n n N2 HB ME3 sing 266 n n C19 O1 ME3 doub 267 n n C19 C18 ME3 sing 268 n n C18 C17 ME3 sing 269 n y C17 C16 ME3 sing 270 n y C16 C11 ME3 sing 271 n y C16 C15 ME3 doub 272 n y C11 C12 ME3 doub 273 n y C12 C13 ME3 sing 274 n y C12 H12 ME3 sing 275 n n C13 C14 ME3 doub 276 n y C13 H13 ME3 sing 277 n n C14 O6 ME3 sing 278 n n C14 C15 ME3 sing 279 n y O6 H6 ME3 sing 280 n n C15 H15 ME3 sing 281 n n # _atom_sites.entry_id 2BZJ _atom_sites.fract_transf_matrix[1][1] 0.010113 _atom_sites.fract_transf_matrix[1][2] 0.005838 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ME3 A 1 1306 1306 ME3 ME3 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . C 3 HOH A 90 2090 2090 HOH HOH . C 3 HOH A 91 2091 2091 HOH HOH . C 3 HOH A 92 2092 2092 HOH HOH . C 3 HOH A 93 2093 2093 HOH HOH . C 3 HOH A 94 2094 2094 HOH HOH . C 3 HOH A 95 2095 2095 HOH HOH . C 3 HOH A 96 2096 2096 HOH HOH . C 3 HOH A 97 2097 2097 HOH HOH . C 3 HOH A 98 2098 2098 HOH HOH . C 3 HOH A 99 2099 2099 HOH HOH . C 3 HOH A 100 2100 2100 HOH HOH . C 3 HOH A 101 2101 2101 HOH HOH . C 3 HOH A 102 2102 2102 HOH HOH . C 3 HOH A 103 2103 2103 HOH HOH . C 3 HOH A 104 2104 2104 HOH HOH . C 3 HOH A 105 2105 2105 HOH HOH . C 3 HOH A 106 2106 2106 HOH HOH . C 3 HOH A 107 2107 2107 HOH HOH . C 3 HOH A 108 2108 2108 HOH HOH . C 3 HOH A 109 2109 2109 HOH HOH . C 3 HOH A 110 2110 2110 HOH HOH . C 3 HOH A 111 2111 2111 HOH HOH . C 3 HOH A 112 2112 2112 HOH HOH . C 3 HOH A 113 2113 2113 HOH HOH . C 3 HOH A 114 2114 2114 HOH HOH . C 3 HOH A 115 2115 2115 HOH HOH . C 3 HOH A 116 2116 2116 HOH HOH . C 3 HOH A 117 2117 2117 HOH HOH . C 3 HOH A 118 2118 2118 HOH HOH . C 3 HOH A 119 2119 2119 HOH HOH . C 3 HOH A 120 2120 2120 HOH HOH . C 3 HOH A 121 2121 2121 HOH HOH . C 3 HOH A 122 2122 2122 HOH HOH . C 3 HOH A 123 2123 2123 HOH HOH . C 3 HOH A 124 2124 2124 HOH HOH . C 3 HOH A 125 2125 2125 HOH HOH . C 3 HOH A 126 2126 2126 HOH HOH . C 3 HOH A 127 2127 2127 HOH HOH . C 3 HOH A 128 2128 2128 HOH HOH . C 3 HOH A 129 2129 2129 HOH HOH . C 3 HOH A 130 2130 2130 HOH HOH . C 3 HOH A 131 2131 2131 HOH HOH . C 3 HOH A 132 2132 2132 HOH HOH . C 3 HOH A 133 2133 2133 HOH HOH . C 3 HOH A 134 2134 2134 HOH HOH . C 3 HOH A 135 2135 2135 HOH HOH . C 3 HOH A 136 2136 2136 HOH HOH . C 3 HOH A 137 2137 2137 HOH HOH . C 3 HOH A 138 2138 2138 HOH HOH . C 3 HOH A 139 2139 2139 HOH HOH . C 3 HOH A 140 2140 2140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O5 ME3 . . . B 2 -21.632 -34.244 -6.512 1 41.52 ? O5 ME3 1306 A 1 HETATM 2 C C24 ME3 . . . B 2 -22.673 -34.587 -5.938 1 40.96 ? C24 ME3 1306 A 1 HETATM 3 O O4 ME3 . . . B 2 -23.306 -35.741 -6.25 1 44.63 ? O4 ME3 1306 A 1 HETATM 4 C C25 ME3 . . . B 2 -22.424 -36.694 -6.841 1 46.08 ? C25 ME3 1306 A 1 HETATM 5 C C26 ME3 . . . B 2 -23.157 -38.029 -7.041 1 47.15 ? C26 ME3 1306 A 1 HETATM 6 C C6 ME3 . . . B 2 -23.193 -33.734 -4.856 1 37.76 ? C6 ME3 1306 A 1 HETATM 7 C C7 ME3 . . . B 2 -22.387 -32.677 -4.465 1 36.34 ? C7 ME3 1306 A 1 HETATM 8 C C8 ME3 . . . B 2 -23.028 -31.965 -3.435 1 36.03 ? C8 ME3 1306 A 1 HETATM 9 C C9 ME3 . . . B 2 -24.281 -32.592 -3.22 1 35.26 ? C9 ME3 1306 A 1 HETATM 10 C C5 ME3 . . . B 2 -24.405 -33.72 -4.07 1 36.3 ? C5 ME3 1306 A 1 HETATM 11 RU RU1 ME3 . . . B 2 -22.598 -34.007 -2.749 1 35.21 ? RU1 ME3 1306 A 1 HETATM 12 C C4 ME3 . . . B 2 -20.789 -34.373 -2.766 1 36.33 ? C4 ME3 1306 A 1 HETATM 13 O O3 ME3 . . . B 2 -19.694 -34.522 -2.911 1 31.31 ? O3 ME3 1306 A 1 HETATM 14 N N1 ME3 . . . B 2 -22.537 -33.649 -0.668 1 33.54 ? N1 ME3 1306 A 1 HETATM 15 C C10 ME3 . . . B 2 -22.898 -34.729 -0.003 1 32.97 ? C10 ME3 1306 A 1 HETATM 16 C C3 ME3 . . . B 2 -23.264 -35.92 -0.68 1 33.03 ? C3 ME3 1306 A 1 HETATM 17 N N3 ME3 . . . B 2 -23.193 -35.915 -2.063 1 33.43 ? N3 ME3 1306 A 1 HETATM 18 C C22 ME3 . . . B 2 -23.649 -37.033 0.092 1 33.22 ? C22 ME3 1306 A 1 HETATM 19 C C23 ME3 . . . B 2 -24.004 -38.211 -0.649 1 33.53 ? C23 ME3 1306 A 1 HETATM 20 C C1 ME3 . . . B 2 -23.935 -38.204 -2.035 1 33.25 ? C1 ME3 1306 A 1 HETATM 21 C C2 ME3 . . . B 2 -23.533 -37.048 -2.734 1 33.27 ? C2 ME3 1306 A 1 HETATM 22 C C21 ME3 . . . B 2 -23.653 -36.841 1.535 1 32.89 ? C21 ME3 1306 A 1 HETATM 23 C C20 ME3 . . . B 2 -24.019 -37.781 2.584 1 33.07 ? C20 ME3 1306 A 1 HETATM 24 O O2 ME3 . . . B 2 -24.395 -38.914 2.456 1 33.47 ? O2 ME3 1306 A 1 HETATM 25 N N2 ME3 . . . B 2 -23.879 -37.127 3.808 1 33.03 ? N2 ME3 1306 A 1 HETATM 26 C C19 ME3 . . . B 2 -23.446 -35.816 3.649 1 33.29 ? C19 ME3 1306 A 1 HETATM 27 O O1 ME3 . . . B 2 -23.241 -34.994 4.527 1 33.73 ? O1 ME3 1306 A 1 HETATM 28 C C18 ME3 . . . B 2 -23.308 -35.648 2.168 1 33.38 ? C18 ME3 1306 A 1 HETATM 29 C C17 ME3 . . . B 2 -22.901 -34.544 1.407 1 33.44 ? C17 ME3 1306 A 1 HETATM 30 C C16 ME3 . . . B 2 -22.479 -33.208 1.567 1 33.05 ? C16 ME3 1306 A 1 HETATM 31 C C11 ME3 . . . B 2 -22.252 -32.687 0.255 1 32.79 ? C11 ME3 1306 A 1 HETATM 32 C C12 ME3 . . . B 2 -21.835 -31.378 0.061 1 32.87 ? C12 ME3 1306 A 1 HETATM 33 C C13 ME3 . . . B 2 -21.608 -30.599 1.195 1 33.15 ? C13 ME3 1306 A 1 HETATM 34 C C14 ME3 . . . B 2 -21.831 -31.123 2.481 1 33.32 ? C14 ME3 1306 A 1 HETATM 35 O O6 ME3 . . . B 2 -21.617 -30.336 3.578 1 33.25 ? O6 ME3 1306 A 1 HETATM 36 C C15 ME3 . . . B 2 -22.262 -32.412 2.676 1 33.1 ? C15 ME3 1306 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 36 #