data_2C1S # _model_server_result.job_id v7w7vd8a1tiiF2Fqg0EJXA _model_server_result.datetime_utc '2024-11-14 19:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2c1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1125}' # _entry.id 2C1S # _exptl.entry_id 2C1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.31 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN-D-SULFOXIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2C1S _cell.length_a 79.652 _cell.length_b 56.049 _cell.length_c 57.126 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 79.652 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 4 1_555 A SG CYS 85 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf2 B SG CYS 5 B CYS 4 1_555 B SG CYS 85 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? # _chem_comp.formula 'C10 H16 N2 O4 S' _chem_comp.formula_weight 260.31 _chem_comp.id BSO _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN-D-SULFOXIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '5-[(3AR,4R,6AS)-5-OXIDO-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANOIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BSO sing 70 n n C11 O12 BSO doub 71 n n C11 C10 BSO sing 72 n n O11 H11 BSO sing 73 n n C10 C9 BSO sing 74 n n C10 H101 BSO sing 75 n n C10 H102 BSO sing 76 n n C9 C8 BSO sing 77 n n C9 H9C1 BSO sing 78 n n C9 H9C2 BSO sing 79 n n C8 C7 BSO sing 80 n n C8 H8C1 BSO sing 81 n n C8 H8C2 BSO sing 82 n n C7 C2 BSO sing 83 n n C7 H7C1 BSO sing 84 n n C7 H7C2 BSO sing 85 n n C2 S1 BSO sing 86 n n C2 C4 BSO sing 87 n n C2 H2 BSO sing 88 n n S1 C6 BSO sing 89 n n S1 O10 BSO doub 90 n n C6 C5 BSO sing 91 n n C6 H6C1 BSO sing 92 n n C6 H6C2 BSO sing 93 n n C5 N1 BSO sing 94 n n C5 C4 BSO sing 95 n n C5 H5 BSO sing 96 n n N1 C3 BSO sing 97 n n N1 H1 BSO sing 98 n n C3 O3 BSO doub 99 n n C3 N2 BSO sing 100 n n N2 C4 BSO sing 101 n n N2 HA BSO sing 102 n n C4 H4 BSO sing 103 n n # _atom_sites.entry_id 2C1S _atom_sites.fract_transf_matrix[1][1] 0.012555 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BSO A 1 1125 1125 BSO BSO . D 2 BSO B 1 1125 1125 BSO BSO . E 3 HOH A 1 2001 2001 HOH HOH . E 3 HOH A 2 2002 2002 HOH HOH . E 3 HOH A 3 2003 2003 HOH HOH . E 3 HOH A 4 2004 2004 HOH HOH . E 3 HOH A 5 2005 2005 HOH HOH . E 3 HOH A 6 2006 2006 HOH HOH . E 3 HOH A 7 2007 2007 HOH HOH . E 3 HOH A 8 2008 2008 HOH HOH . E 3 HOH A 9 2009 2009 HOH HOH . E 3 HOH A 10 2010 2010 HOH HOH . E 3 HOH A 11 2011 2011 HOH HOH . E 3 HOH A 12 2012 2012 HOH HOH . E 3 HOH A 13 2013 2013 HOH HOH . E 3 HOH A 14 2014 2014 HOH HOH . E 3 HOH A 15 2015 2015 HOH HOH . E 3 HOH A 16 2016 2016 HOH HOH . E 3 HOH A 17 2017 2017 HOH HOH . E 3 HOH A 18 2018 2018 HOH HOH . E 3 HOH A 19 2019 2019 HOH HOH . E 3 HOH A 20 2020 2020 HOH HOH . E 3 HOH A 21 2021 2021 HOH HOH . E 3 HOH A 22 2022 2022 HOH HOH . E 3 HOH A 23 2023 2023 HOH HOH . E 3 HOH A 24 2024 2024 HOH HOH . E 3 HOH A 25 2025 2025 HOH HOH . E 3 HOH A 26 2026 2026 HOH HOH . E 3 HOH A 27 2027 2027 HOH HOH . E 3 HOH A 28 2028 2028 HOH HOH . E 3 HOH A 29 2029 2029 HOH HOH . E 3 HOH A 30 2030 2030 HOH HOH . E 3 HOH A 31 2031 2031 HOH HOH . E 3 HOH A 32 2032 2032 HOH HOH . E 3 HOH A 33 2033 2033 HOH HOH . E 3 HOH A 34 2034 2034 HOH HOH . E 3 HOH A 35 2035 2035 HOH HOH . E 3 HOH A 36 2036 2036 HOH HOH . E 3 HOH A 37 2037 2037 HOH HOH . E 3 HOH A 38 2038 2038 HOH HOH . E 3 HOH A 39 2039 2039 HOH HOH . E 3 HOH A 40 2040 2040 HOH HOH . E 3 HOH A 41 2041 2041 HOH HOH . E 3 HOH A 42 2042 2042 HOH HOH . E 3 HOH A 43 2043 2043 HOH HOH . E 3 HOH A 44 2044 2044 HOH HOH . E 3 HOH A 45 2045 2045 HOH HOH . E 3 HOH A 46 2046 2046 HOH HOH . E 3 HOH A 47 2047 2047 HOH HOH . E 3 HOH A 48 2048 2048 HOH HOH . E 3 HOH A 49 2049 2049 HOH HOH . E 3 HOH A 50 2050 2050 HOH HOH . E 3 HOH A 51 2051 2051 HOH HOH . E 3 HOH A 52 2052 2052 HOH HOH . E 3 HOH A 53 2053 2053 HOH HOH . E 3 HOH A 54 2054 2054 HOH HOH . E 3 HOH A 55 2055 2055 HOH HOH . E 3 HOH A 56 2056 2056 HOH HOH . E 3 HOH A 57 2057 2057 HOH HOH . E 3 HOH A 58 2058 2058 HOH HOH . E 3 HOH A 59 2059 2059 HOH HOH . E 3 HOH A 60 2060 2060 HOH HOH . E 3 HOH A 61 2061 2061 HOH HOH . E 3 HOH A 62 2062 2062 HOH HOH . E 3 HOH A 63 2063 2063 HOH HOH . E 3 HOH A 64 2064 2064 HOH HOH . E 3 HOH A 65 2065 2065 HOH HOH . E 3 HOH A 66 2066 2066 HOH HOH . E 3 HOH A 67 2067 2067 HOH HOH . E 3 HOH A 68 2068 2068 HOH HOH . E 3 HOH A 69 2069 2069 HOH HOH . E 3 HOH A 70 2070 2070 HOH HOH . E 3 HOH A 71 2071 2071 HOH HOH . E 3 HOH A 72 2072 2072 HOH HOH . E 3 HOH A 73 2073 2073 HOH HOH . E 3 HOH A 74 2074 2074 HOH HOH . E 3 HOH A 75 2075 2075 HOH HOH . E 3 HOH A 76 2076 2076 HOH HOH . E 3 HOH A 77 2077 2077 HOH HOH . E 3 HOH A 78 2078 2078 HOH HOH . E 3 HOH A 79 2079 2079 HOH HOH . E 3 HOH A 80 2080 2080 HOH HOH . E 3 HOH A 81 2081 2081 HOH HOH . E 3 HOH A 82 2082 2082 HOH HOH . E 3 HOH A 83 2083 2083 HOH HOH . E 3 HOH A 84 2084 2084 HOH HOH . E 3 HOH A 85 2085 2085 HOH HOH . E 3 HOH A 86 2086 2086 HOH HOH . E 3 HOH A 87 2087 2087 HOH HOH . E 3 HOH A 88 2088 2088 HOH HOH . E 3 HOH A 89 2089 2089 HOH HOH . E 3 HOH A 90 2090 2090 HOH HOH . E 3 HOH A 91 2091 2091 HOH HOH . E 3 HOH A 92 2092 2092 HOH HOH . E 3 HOH A 93 2093 2093 HOH HOH . E 3 HOH A 94 2094 2094 HOH HOH . E 3 HOH A 95 2095 2095 HOH HOH . E 3 HOH A 96 2096 2096 HOH HOH . E 3 HOH A 97 2097 2097 HOH HOH . E 3 HOH A 98 2098 2098 HOH HOH . E 3 HOH A 99 2099 2099 HOH HOH . E 3 HOH A 100 2100 2100 HOH HOH . E 3 HOH A 101 2101 2101 HOH HOH . E 3 HOH A 102 2102 2102 HOH HOH . E 3 HOH A 103 2103 2103 HOH HOH . E 3 HOH A 104 2104 2104 HOH HOH . E 3 HOH A 105 2105 2105 HOH HOH . E 3 HOH A 106 2106 2106 HOH HOH . E 3 HOH A 107 2107 2107 HOH HOH . E 3 HOH A 108 2108 2108 HOH HOH . E 3 HOH A 109 2109 2109 HOH HOH . E 3 HOH A 110 2110 2110 HOH HOH . E 3 HOH A 111 2111 2111 HOH HOH . E 3 HOH A 112 2112 2112 HOH HOH . E 3 HOH A 113 2113 2113 HOH HOH . E 3 HOH A 114 2114 2114 HOH HOH . F 3 HOH B 1 2001 2001 HOH HOH . F 3 HOH B 2 2002 2002 HOH HOH . F 3 HOH B 3 2003 2003 HOH HOH . F 3 HOH B 4 2004 2004 HOH HOH . F 3 HOH B 5 2005 2005 HOH HOH . F 3 HOH B 6 2006 2006 HOH HOH . F 3 HOH B 7 2007 2007 HOH HOH . F 3 HOH B 8 2008 2008 HOH HOH . F 3 HOH B 9 2009 2009 HOH HOH . F 3 HOH B 10 2010 2010 HOH HOH . F 3 HOH B 11 2011 2011 HOH HOH . F 3 HOH B 12 2012 2012 HOH HOH . F 3 HOH B 13 2013 2013 HOH HOH . F 3 HOH B 14 2014 2014 HOH HOH . F 3 HOH B 15 2015 2015 HOH HOH . F 3 HOH B 16 2016 2016 HOH HOH . F 3 HOH B 17 2017 2017 HOH HOH . F 3 HOH B 18 2018 2018 HOH HOH . F 3 HOH B 19 2019 2019 HOH HOH . F 3 HOH B 20 2020 2020 HOH HOH . F 3 HOH B 21 2021 2021 HOH HOH . F 3 HOH B 22 2022 2022 HOH HOH . F 3 HOH B 23 2023 2023 HOH HOH . F 3 HOH B 24 2024 2024 HOH HOH . F 3 HOH B 25 2025 2025 HOH HOH . F 3 HOH B 26 2026 2026 HOH HOH . F 3 HOH B 27 2027 2027 HOH HOH . F 3 HOH B 28 2028 2028 HOH HOH . F 3 HOH B 29 2029 2029 HOH HOH . F 3 HOH B 30 2030 2030 HOH HOH . F 3 HOH B 31 2031 2031 HOH HOH . F 3 HOH B 32 2032 2032 HOH HOH . F 3 HOH B 33 2033 2033 HOH HOH . F 3 HOH B 34 2034 2034 HOH HOH . F 3 HOH B 35 2035 2035 HOH HOH . F 3 HOH B 36 2036 2036 HOH HOH . F 3 HOH B 37 2037 2037 HOH HOH . F 3 HOH B 38 2038 2038 HOH HOH . F 3 HOH B 39 2039 2039 HOH HOH . F 3 HOH B 40 2040 2040 HOH HOH . F 3 HOH B 41 2041 2041 HOH HOH . F 3 HOH B 42 2042 2042 HOH HOH . F 3 HOH B 43 2043 2043 HOH HOH . F 3 HOH B 44 2044 2044 HOH HOH . F 3 HOH B 45 2045 2045 HOH HOH . F 3 HOH B 46 2046 2046 HOH HOH . F 3 HOH B 47 2047 2047 HOH HOH . F 3 HOH B 48 2048 2048 HOH HOH . F 3 HOH B 49 2049 2049 HOH HOH . F 3 HOH B 50 2050 2050 HOH HOH . F 3 HOH B 51 2051 2051 HOH HOH . F 3 HOH B 52 2052 2052 HOH HOH . F 3 HOH B 53 2053 2053 HOH HOH . F 3 HOH B 54 2054 2054 HOH HOH . F 3 HOH B 55 2055 2055 HOH HOH . F 3 HOH B 56 2056 2056 HOH HOH . F 3 HOH B 57 2057 2057 HOH HOH . F 3 HOH B 58 2058 2058 HOH HOH . F 3 HOH B 59 2059 2059 HOH HOH . F 3 HOH B 60 2060 2060 HOH HOH . F 3 HOH B 61 2061 2061 HOH HOH . F 3 HOH B 62 2062 2062 HOH HOH . F 3 HOH B 63 2063 2063 HOH HOH . F 3 HOH B 64 2064 2064 HOH HOH . F 3 HOH B 65 2065 2065 HOH HOH . F 3 HOH B 66 2066 2066 HOH HOH . F 3 HOH B 67 2067 2067 HOH HOH . F 3 HOH B 68 2068 2068 HOH HOH . F 3 HOH B 69 2069 2069 HOH HOH . F 3 HOH B 70 2070 2070 HOH HOH . F 3 HOH B 71 2071 2071 HOH HOH . F 3 HOH B 72 2072 2072 HOH HOH . F 3 HOH B 73 2073 2073 HOH HOH . F 3 HOH B 74 2074 2074 HOH HOH . F 3 HOH B 75 2075 2075 HOH HOH . F 3 HOH B 76 2076 2076 HOH HOH . F 3 HOH B 77 2077 2077 HOH HOH . F 3 HOH B 78 2078 2078 HOH HOH . F 3 HOH B 79 2079 2079 HOH HOH . F 3 HOH B 80 2080 2080 HOH HOH . F 3 HOH B 81 2081 2081 HOH HOH . F 3 HOH B 82 2082 2082 HOH HOH . F 3 HOH B 83 2083 2083 HOH HOH . F 3 HOH B 84 2084 2084 HOH HOH . F 3 HOH B 85 2085 2085 HOH HOH . F 3 HOH B 86 2086 2086 HOH HOH . F 3 HOH B 87 2087 2087 HOH HOH . F 3 HOH B 88 2088 2088 HOH HOH . F 3 HOH B 89 2089 2089 HOH HOH . F 3 HOH B 90 2090 2090 HOH HOH . F 3 HOH B 91 2091 2091 HOH HOH . F 3 HOH B 92 2092 2092 HOH HOH . F 3 HOH B 93 2093 2093 HOH HOH . F 3 HOH B 94 2094 2094 HOH HOH . F 3 HOH B 95 2095 2095 HOH HOH . F 3 HOH B 96 2096 2096 HOH HOH . F 3 HOH B 97 2097 2097 HOH HOH . F 3 HOH B 98 2098 2098 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BSO . . . C 2 31.044 11.396 15.098 1 18.16 ? C11 BSO 1125 A 1 HETATM 2 O O11 BSO . . . C 2 31.03 12.44 14.406 1 21.03 ? O11 BSO 1125 A 1 HETATM 3 O O12 BSO . . . C 2 30.332 10.401 14.871 1 17.81 ? O12 BSO 1125 A 1 HETATM 4 C C10 BSO . . . C 2 31.967 11.309 16.333 1 16.32 ? C10 BSO 1125 A 1 HETATM 5 C C9 BSO . . . C 2 33.287 12.112 16.259 1 16.64 ? C9 BSO 1125 A 1 HETATM 6 C C8 BSO . . . C 2 34.251 11.395 15.321 1 17.13 ? C8 BSO 1125 A 1 HETATM 7 C C7 BSO . . . C 2 35.482 12.286 15.059 1 16.97 ? C7 BSO 1125 A 1 HETATM 8 C C2 BSO . . . C 2 36.434 11.56 14.081 1 15.45 ? C2 BSO 1125 A 1 HETATM 9 S S1 BSO . . . C 2 37.244 10.103 14.761 1 18.39 ? S1 BSO 1125 A 1 HETATM 10 C C6 BSO . . . C 2 38.434 10.006 13.393 1 17.75 ? C6 BSO 1125 A 1 HETATM 11 C C5 BSO . . . C 2 38.785 11.472 13.068 1 18.18 ? C5 BSO 1125 A 1 HETATM 12 N N1 BSO . . . C 2 39.937 11.877 13.887 1 17.23 ? N1 BSO 1125 A 1 HETATM 13 C C3 BSO . . . C 2 39.584 12.846 14.74 1 17.27 ? C3 BSO 1125 A 1 HETATM 14 O O3 BSO . . . C 2 40.406 13.361 15.504 1 18.64 ? O3 BSO 1125 A 1 HETATM 15 N N2 BSO . . . C 2 38.302 13.221 14.637 1 16.55 ? N2 BSO 1125 A 1 HETATM 16 C C4 BSO . . . C 2 37.639 12.419 13.564 1 15.41 ? C4 BSO 1125 A 1 HETATM 17 O O10 BSO . . . C 2 36.247 8.991 14.578 1 21.82 ? O10 BSO 1125 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 216 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #