data_2C5X # _model_server_result.job_id RRL4z0SqInsTTnWrdzIreQ _model_server_result.datetime_utc '2024-12-03 07:08:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2c5x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1297}' # _entry.id 2C5X # _exptl.entry_id 2C5X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 373.368 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HYDROXY(OXO)(3-{[(2Z)-4-[3-(1H-1,2,4-TRIAZOL-1-YLMETHYL)PHENYL]PYRIMIDIN-2(5H)-YLIDENE]AMINO}PHENYL)AMMONIUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2C5X _cell.length_a 74.334 _cell.length_b 112.352 _cell.length_c 154.911 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C5X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C19 H15 N7 O2' _chem_comp.formula_weight 373.368 _chem_comp.id MTW _chem_comp.mon_nstd_flag . _chem_comp.name HYDROXY(OXO)(3-{[(2Z)-4-[3-(1H-1,2,4-TRIAZOL-1-YLMETHYL)PHENYL]PYRIMIDIN-2(5H)-YLIDENE]AMINO}PHENYL)AMMONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 MTW doub 237 n y C N MTW sing 238 n y C H MTW sing 239 n n N1 C1 MTW sing 240 n y C1 N2 MTW doub 241 n y C1 H1 MTW sing 242 n n N2 N MTW sing 243 n y N C2 MTW sing 244 n n C2 C3 MTW sing 245 n n C2 H2C1 MTW sing 246 n n C2 H2C2 MTW sing 247 n n C3 C4 MTW doub 248 n y C3 C17 MTW sing 249 n y C4 C5 MTW sing 250 n y C4 H4 MTW sing 251 n n C17 C18 MTW doub 252 n y C17 H17 MTW sing 253 n n C18 C6 MTW sing 254 n y C18 H18 MTW sing 255 n n C6 C5 MTW doub 256 n y C6 H6 MTW sing 257 n n C5 C7 MTW sing 258 n n C7 N3 MTW doub 259 n n C7 C8 MTW sing 260 n n N3 C10 MTW sing 261 n n C8 C9 MTW sing 262 n n C8 H8C1 MTW sing 263 n n C8 H8C2 MTW sing 264 n n C9 N4 MTW doub 265 n n C9 H9 MTW sing 266 n n N4 C10 MTW sing 267 n n C10 N5 MTW doub 268 z n N5 C11 MTW sing 269 n n C11 C14 MTW doub 270 n y C11 C12 MTW sing 271 n y C14 C15 MTW sing 272 n y C14 H14 MTW sing 273 n n C12 C13 MTW doub 274 n y C12 H12 MTW sing 275 n n C13 C16 MTW sing 276 n y C13 H13 MTW sing 277 n n C16 C15 MTW doub 278 n y C16 H16 MTW sing 279 n n C15 N6 MTW sing 280 n n N6 O2 MTW sing 281 n n N6 O1 MTW doub 282 n n # _atom_sites.entry_id 2C5X _atom_sites.fract_transf_matrix[1][1] 0.013453 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MTW A 1 1297 1297 MTW MTW . F 3 MTW C 1 1297 1297 MTW MTW . G 4 HOH A 1 2001 2001 HOH HOH . G 4 HOH A 2 2002 2002 HOH HOH . G 4 HOH A 3 2003 2003 HOH HOH . G 4 HOH A 4 2004 2004 HOH HOH . G 4 HOH A 5 2005 2005 HOH HOH . G 4 HOH A 6 2006 2006 HOH HOH . G 4 HOH A 7 2007 2007 HOH HOH . G 4 HOH A 8 2008 2008 HOH HOH . G 4 HOH A 9 2009 2009 HOH HOH . G 4 HOH A 10 2010 2010 HOH HOH . G 4 HOH A 11 2011 2011 HOH HOH . G 4 HOH A 12 2012 2012 HOH HOH . G 4 HOH A 13 2013 2013 HOH HOH . G 4 HOH A 14 2014 2014 HOH HOH . G 4 HOH A 15 2015 2015 HOH HOH . G 4 HOH A 16 2016 2016 HOH HOH . G 4 HOH A 17 2017 2017 HOH HOH . G 4 HOH A 18 2018 2018 HOH HOH . G 4 HOH A 19 2019 2019 HOH HOH . G 4 HOH A 20 2020 2020 HOH HOH . G 4 HOH A 21 2021 2021 HOH HOH . G 4 HOH A 22 2022 2022 HOH HOH . G 4 HOH A 23 2023 2023 HOH HOH . G 4 HOH A 24 2024 2024 HOH HOH . G 4 HOH A 25 2025 2025 HOH HOH . G 4 HOH A 26 2026 2026 HOH HOH . H 4 HOH B 1 2001 2001 HOH HOH . H 4 HOH B 2 2002 2002 HOH HOH . H 4 HOH B 3 2003 2003 HOH HOH . H 4 HOH B 4 2004 2004 HOH HOH . H 4 HOH B 5 2005 2005 HOH HOH . H 4 HOH B 6 2006 2006 HOH HOH . H 4 HOH B 7 2007 2007 HOH HOH . H 4 HOH B 8 2008 2008 HOH HOH . H 4 HOH B 9 2009 2009 HOH HOH . H 4 HOH B 10 2010 2010 HOH HOH . H 4 HOH B 11 2011 2011 HOH HOH . H 4 HOH B 12 2012 2012 HOH HOH . H 4 HOH B 13 2013 2013 HOH HOH . H 4 HOH B 14 2014 2014 HOH HOH . H 4 HOH B 15 2015 2015 HOH HOH . H 4 HOH B 16 2016 2016 HOH HOH . H 4 HOH B 17 2017 2017 HOH HOH . I 4 HOH C 1 2001 2001 HOH HOH . I 4 HOH C 2 2002 2002 HOH HOH . I 4 HOH C 3 2003 2003 HOH HOH . I 4 HOH C 4 2004 2004 HOH HOH . I 4 HOH C 5 2005 2005 HOH HOH . I 4 HOH C 6 2006 2006 HOH HOH . I 4 HOH C 7 2007 2007 HOH HOH . I 4 HOH C 8 2008 2008 HOH HOH . I 4 HOH C 9 2009 2009 HOH HOH . I 4 HOH C 10 2010 2010 HOH HOH . I 4 HOH C 11 2011 2011 HOH HOH . I 4 HOH C 12 2012 2012 HOH HOH . I 4 HOH C 13 2013 2013 HOH HOH . I 4 HOH C 14 2014 2014 HOH HOH . I 4 HOH C 15 2015 2015 HOH HOH . I 4 HOH C 16 2016 2016 HOH HOH . I 4 HOH C 17 2017 2017 HOH HOH . I 4 HOH C 18 2018 2018 HOH HOH . I 4 HOH C 19 2019 2019 HOH HOH . I 4 HOH C 20 2020 2020 HOH HOH . I 4 HOH C 21 2021 2021 HOH HOH . I 4 HOH C 22 2022 2022 HOH HOH . I 4 HOH C 23 2023 2023 HOH HOH . I 4 HOH C 24 2024 2024 HOH HOH . I 4 HOH C 25 2025 2025 HOH HOH . I 4 HOH C 26 2026 2026 HOH HOH . I 4 HOH C 27 2027 2027 HOH HOH . I 4 HOH C 28 2028 2028 HOH HOH . J 4 HOH D 1 2001 2001 HOH HOH . J 4 HOH D 2 2002 2002 HOH HOH . J 4 HOH D 3 2003 2003 HOH HOH . J 4 HOH D 4 2004 2004 HOH HOH . J 4 HOH D 5 2005 2005 HOH HOH . J 4 HOH D 6 2006 2006 HOH HOH . J 4 HOH D 7 2007 2007 HOH HOH . J 4 HOH D 8 2008 2008 HOH HOH . J 4 HOH D 9 2009 2009 HOH HOH . J 4 HOH D 10 2010 2010 HOH HOH . J 4 HOH D 11 2011 2011 HOH HOH . J 4 HOH D 12 2012 2012 HOH HOH . J 4 HOH D 13 2013 2013 HOH HOH . J 4 HOH D 14 2014 2014 HOH HOH . J 4 HOH D 15 2015 2015 HOH HOH . J 4 HOH D 16 2016 2016 HOH HOH . J 4 HOH D 17 2017 2017 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C MTW . . . F 3 46.114 49.246 27.971 1 102.99 ? C MTW 1297 C 1 HETATM 2 N N1 MTW . . . F 3 47.405 49.184 28.309 1 99.9 ? N1 MTW 1297 C 1 HETATM 3 C C1 MTW . . . F 3 47.794 50.443 28.532 1 99.53 ? C1 MTW 1297 C 1 HETATM 4 N N2 MTW . . . F 3 46.724 51.219 28.321 1 105.79 ? N2 MTW 1297 C 1 HETATM 5 N N MTW . . . F 3 45.745 50.537 27.972 1 103.9 ? N MTW 1297 C 1 HETATM 6 C C2 MTW . . . F 3 44.381 51.071 27.672 1 101.66 ? C2 MTW 1297 C 1 HETATM 7 C C3 MTW . . . F 3 44.003 51.213 26.17 1 91.97 ? C3 MTW 1297 C 1 HETATM 8 C C4 MTW . . . F 3 44.296 50.246 25.191 1 79.14 ? C4 MTW 1297 C 1 HETATM 9 C C17 MTW . . . F 3 43.31 52.358 25.802 1 74.55 ? C17 MTW 1297 C 1 HETATM 10 C C18 MTW . . . F 3 42.966 52.481 24.464 1 83.33 ? C18 MTW 1297 C 1 HETATM 11 C C6 MTW . . . F 3 43.247 51.503 23.511 1 76.93 ? C6 MTW 1297 C 1 HETATM 12 C C5 MTW . . . F 3 43.916 50.332 23.848 1 69.76 ? C5 MTW 1297 C 1 HETATM 13 C C7 MTW . . . F 3 44.188 49.37 22.85 1 62.77 ? C7 MTW 1297 C 1 HETATM 14 N N3 MTW . . . F 3 45.009 48.307 23.016 1 52.7 ? N3 MTW 1297 C 1 HETATM 15 C C8 MTW . . . F 3 43.597 49.481 21.583 1 47.14 ? C8 MTW 1297 C 1 HETATM 16 C C9 MTW . . . F 3 43.856 48.547 20.571 1 44.76 ? C9 MTW 1297 C 1 HETATM 17 N N4 MTW . . . F 3 44.708 47.551 20.766 1 40.81 ? N4 MTW 1297 C 1 HETATM 18 C C10 MTW . . . F 3 45.242 47.438 21.999 1 52.79 ? C10 MTW 1297 C 1 HETATM 19 N N5 MTW . . . F 3 46.12 46.454 22.142 1 56.37 ? N5 MTW 1297 C 1 HETATM 20 C C11 MTW . . . F 3 46.889 46.214 23.209 1 71.78 ? C11 MTW 1297 C 1 HETATM 21 C C14 MTW . . . F 3 46.643 46.742 24.47 1 86.2 ? C14 MTW 1297 C 1 HETATM 22 C C12 MTW . . . F 3 47.939 45.311 23.086 1 67.94 ? C12 MTW 1297 C 1 HETATM 23 C C13 MTW . . . F 3 48.729 44.936 24.164 1 71.94 ? C13 MTW 1297 C 1 HETATM 24 C C16 MTW . . . F 3 48.476 45.435 25.428 1 81.73 ? C16 MTW 1297 C 1 HETATM 25 C C15 MTW . . . F 3 47.439 46.347 25.544 1 95.48 ? C15 MTW 1297 C 1 HETATM 26 N N6 MTW . . . F 3 47.209 46.879 26.731 1 105.67 ? N6 MTW 1297 C 1 HETATM 27 O O2 MTW . . . F 3 48.299 47.129 27.633 1 116.03 ? O2 MTW 1297 C 1 HETATM 28 O O1 MTW . . . F 3 45.864 47.223 27.038 1 111.8 ? O1 MTW 1297 C 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #