data_2CAJ
#
_model_server_result.job_id            iWprADF3O3-676TCrH_E1A 
_model_server_result.datetime_utc      '2024-10-18 15:31:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2caj 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1144}' 
#
_entry.id    2CAJ 
#
_exptl.entry_id    2CAJ 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2CAJ 
_cell.length_a            71.598 
_cell.length_b            71.598 
_cell.length_c            228.834 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 2CAJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 96 1_555 A SG CYS 96 A CYS 96 8_555 ? B ? ? B ? ? ? ? ? ? ? 2.533 ? 
disulf ? disulf2 A SG CYS 96 A CYS 96 1_555 A SG CYS 96 A CYS 96 8_555 ? A ? ? A ? ? ? ? ? ? ? 2.797 ? 
metalc ? metalc1 A NE2 HIS 74 A HIS 74 8_555 J NI NI . B NI 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc2 A NE2 HIS 88 A HIS 88 8_555 K NI NI . B NI 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc3 B NE2 HIS 74 B HIS 74 1_555 K NI NI . B NI 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2CAJ 
_atom_sites.fract_transf_matrix[1][1]    0.013967 
_atom_sites.fract_transf_matrix[1][2]    0.008064 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016128 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00437 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 1142 1142 GOL GOL . 
D 2 GOL A 1 1143 1143 GOL GOL . 
E 2 GOL A 1 1144 1144 GOL GOL . 
F 2 GOL A 1 1145 1145 GOL GOL . 
G 2 GOL B 1 1148 1148 GOL GOL . 
H 2 GOL B 1 1149 1149 GOL GOL . 
I 3 CL B 1 1150 1150 CL CL . 
J 4 NI B 1 1151 1151 NI NI . 
K 4 NI B 1 1152 1152 NI NI . 
L 5 HOH A 1 2001 2001 HOH HOH . 
L 5 HOH A 2 2002 2002 HOH HOH . 
L 5 HOH A 3 2003 2003 HOH HOH . 
L 5 HOH A 4 2004 2004 HOH HOH . 
L 5 HOH A 5 2005 2005 HOH HOH . 
L 5 HOH A 6 2006 2006 HOH HOH . 
L 5 HOH A 7 2007 2007 HOH HOH . 
L 5 HOH A 8 2008 2008 HOH HOH . 
L 5 HOH A 9 2009 2009 HOH HOH . 
L 5 HOH A 10 2010 2010 HOH HOH . 
L 5 HOH A 11 2011 2011 HOH HOH . 
L 5 HOH A 12 2012 2012 HOH HOH . 
L 5 HOH A 13 2013 2013 HOH HOH . 
L 5 HOH A 14 2014 2014 HOH HOH . 
L 5 HOH A 15 2015 2015 HOH HOH . 
L 5 HOH A 16 2016 2016 HOH HOH . 
L 5 HOH A 17 2017 2017 HOH HOH . 
L 5 HOH A 18 2018 2018 HOH HOH . 
L 5 HOH A 19 2019 2019 HOH HOH . 
L 5 HOH A 20 2020 2020 HOH HOH . 
L 5 HOH A 21 2021 2021 HOH HOH . 
L 5 HOH A 22 2022 2022 HOH HOH . 
L 5 HOH A 23 2023 2023 HOH HOH . 
L 5 HOH A 24 2024 2024 HOH HOH . 
L 5 HOH A 25 2025 2025 HOH HOH . 
L 5 HOH A 26 2026 2026 HOH HOH . 
L 5 HOH A 27 2027 2027 HOH HOH . 
L 5 HOH A 28 2028 2028 HOH HOH . 
L 5 HOH A 29 2029 2029 HOH HOH . 
L 5 HOH A 30 2030 2030 HOH HOH . 
L 5 HOH A 31 2031 2031 HOH HOH . 
M 5 HOH B 1 2001 2001 HOH HOH . 
M 5 HOH B 2 2002 2002 HOH HOH . 
M 5 HOH B 3 2003 2003 HOH HOH . 
M 5 HOH B 4 2004 2004 HOH HOH . 
M 5 HOH B 5 2005 2005 HOH HOH . 
M 5 HOH B 6 2006 2006 HOH HOH . 
M 5 HOH B 7 2007 2007 HOH HOH . 
M 5 HOH B 8 2008 2008 HOH HOH . 
M 5 HOH B 9 2009 2009 HOH HOH . 
M 5 HOH B 10 2010 2010 HOH HOH . 
M 5 HOH B 11 2011 2011 HOH HOH . 
M 5 HOH B 12 2012 2012 HOH HOH . 
M 5 HOH B 13 2013 2013 HOH HOH . 
M 5 HOH B 14 2014 2014 HOH HOH . 
M 5 HOH B 15 2015 2015 HOH HOH . 
M 5 HOH B 16 2016 2016 HOH HOH . 
M 5 HOH B 17 2017 2017 HOH HOH . 
M 5 HOH B 18 2018 2018 HOH HOH . 
M 5 HOH B 19 2019 2019 HOH HOH . 
M 5 HOH B 20 2020 2020 HOH HOH . 
M 5 HOH B 21 2021 2021 HOH HOH . 
M 5 HOH B 22 2022 2022 HOH HOH . 
M 5 HOH B 23 2023 2023 HOH HOH . 
M 5 HOH B 24 2024 2024 HOH HOH . 
M 5 HOH B 25 2025 2025 HOH HOH . 
M 5 HOH B 26 2026 2026 HOH HOH . 
M 5 HOH B 27 2027 2027 HOH HOH . 
M 5 HOH B 28 2028 2028 HOH HOH . 
M 5 HOH B 29 2029 2029 HOH HOH . 
M 5 HOH B 30 2030 2030 HOH HOH . 
M 5 HOH B 31 2031 2031 HOH HOH . 
M 5 HOH B 32 2032 2032 HOH HOH . 
M 5 HOH B 33 2033 2033 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 2 28.747 8.321 8.913 1 56.43 ? C1 GOL 1144 A 1 
HETATM 2 O O1 GOL . . . E 2 29.19 7.611 10.061 1 56.4 ? O1 GOL 1144 A 1 
HETATM 3 C C2 GOL . . . E 2 27.23 8.385 8.749 1 55.76 ? C2 GOL 1144 A 1 
HETATM 4 O O2 GOL . . . E 2 26.836 7.219 8.069 1 60.66 ? O2 GOL 1144 A 1 
HETATM 5 C C3 GOL . . . E 2 26.687 9.566 7.943 1 54.66 ? C3 GOL 1144 A 1 
HETATM 6 O O3 GOL . . . E 2 25.26 9.666 8.08 1 52.92 ? O3 GOL 1144 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#