data_2CAJ # _model_server_result.job_id noROTOz-ibIcD0mgL_Cjgw _model_server_result.datetime_utc '2024-10-18 15:32:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2caj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1152}' # _entry.id 2CAJ # _exptl.entry_id 2CAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2CAJ _cell.length_a 71.598 _cell.length_b 71.598 _cell.length_c 228.834 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 96 1_555 A SG CYS 96 A CYS 96 8_555 ? B ? ? B ? ? ? ? ? ? ? 2.533 ? disulf ? disulf2 A SG CYS 96 A CYS 96 1_555 A SG CYS 96 A CYS 96 8_555 ? A ? ? A ? ? ? ? ? ? ? 2.797 ? metalc ? metalc1 A NE2 HIS 74 A HIS 74 8_555 J NI NI . B NI 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc2 A NE2 HIS 88 A HIS 88 8_555 K NI NI . B NI 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc3 B NE2 HIS 74 B HIS 74 1_555 K NI NI . B NI 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2CAJ _atom_sites.fract_transf_matrix[1][1] 0.013967 _atom_sites.fract_transf_matrix[1][2] 0.008064 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 1142 1142 GOL GOL . D 2 GOL A 1 1143 1143 GOL GOL . E 2 GOL A 1 1144 1144 GOL GOL . F 2 GOL A 1 1145 1145 GOL GOL . G 2 GOL B 1 1148 1148 GOL GOL . H 2 GOL B 1 1149 1149 GOL GOL . I 3 CL B 1 1150 1150 CL CL . J 4 NI B 1 1151 1151 NI NI . K 4 NI B 1 1152 1152 NI NI . L 5 HOH A 1 2001 2001 HOH HOH . L 5 HOH A 2 2002 2002 HOH HOH . L 5 HOH A 3 2003 2003 HOH HOH . L 5 HOH A 4 2004 2004 HOH HOH . L 5 HOH A 5 2005 2005 HOH HOH . L 5 HOH A 6 2006 2006 HOH HOH . L 5 HOH A 7 2007 2007 HOH HOH . L 5 HOH A 8 2008 2008 HOH HOH . L 5 HOH A 9 2009 2009 HOH HOH . L 5 HOH A 10 2010 2010 HOH HOH . L 5 HOH A 11 2011 2011 HOH HOH . L 5 HOH A 12 2012 2012 HOH HOH . L 5 HOH A 13 2013 2013 HOH HOH . L 5 HOH A 14 2014 2014 HOH HOH . L 5 HOH A 15 2015 2015 HOH HOH . L 5 HOH A 16 2016 2016 HOH HOH . L 5 HOH A 17 2017 2017 HOH HOH . L 5 HOH A 18 2018 2018 HOH HOH . L 5 HOH A 19 2019 2019 HOH HOH . L 5 HOH A 20 2020 2020 HOH HOH . L 5 HOH A 21 2021 2021 HOH HOH . L 5 HOH A 22 2022 2022 HOH HOH . L 5 HOH A 23 2023 2023 HOH HOH . L 5 HOH A 24 2024 2024 HOH HOH . L 5 HOH A 25 2025 2025 HOH HOH . L 5 HOH A 26 2026 2026 HOH HOH . L 5 HOH A 27 2027 2027 HOH HOH . L 5 HOH A 28 2028 2028 HOH HOH . L 5 HOH A 29 2029 2029 HOH HOH . L 5 HOH A 30 2030 2030 HOH HOH . L 5 HOH A 31 2031 2031 HOH HOH . M 5 HOH B 1 2001 2001 HOH HOH . M 5 HOH B 2 2002 2002 HOH HOH . M 5 HOH B 3 2003 2003 HOH HOH . M 5 HOH B 4 2004 2004 HOH HOH . M 5 HOH B 5 2005 2005 HOH HOH . M 5 HOH B 6 2006 2006 HOH HOH . M 5 HOH B 7 2007 2007 HOH HOH . M 5 HOH B 8 2008 2008 HOH HOH . M 5 HOH B 9 2009 2009 HOH HOH . M 5 HOH B 10 2010 2010 HOH HOH . M 5 HOH B 11 2011 2011 HOH HOH . M 5 HOH B 12 2012 2012 HOH HOH . M 5 HOH B 13 2013 2013 HOH HOH . M 5 HOH B 14 2014 2014 HOH HOH . M 5 HOH B 15 2015 2015 HOH HOH . M 5 HOH B 16 2016 2016 HOH HOH . M 5 HOH B 17 2017 2017 HOH HOH . M 5 HOH B 18 2018 2018 HOH HOH . M 5 HOH B 19 2019 2019 HOH HOH . M 5 HOH B 20 2020 2020 HOH HOH . M 5 HOH B 21 2021 2021 HOH HOH . M 5 HOH B 22 2022 2022 HOH HOH . M 5 HOH B 23 2023 2023 HOH HOH . M 5 HOH B 24 2024 2024 HOH HOH . M 5 HOH B 25 2025 2025 HOH HOH . M 5 HOH B 26 2026 2026 HOH HOH . M 5 HOH B 27 2027 2027 HOH HOH . M 5 HOH B 28 2028 2028 HOH HOH . M 5 HOH B 29 2029 2029 HOH HOH . M 5 HOH B 30 2030 2030 HOH HOH . M 5 HOH B 31 2031 2031 HOH HOH . M 5 HOH B 32 2032 2032 HOH HOH . M 5 HOH B 33 2033 2033 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x 17.609 _atom_site.Cartn_y -6.278 _atom_site.Cartn_z -11.691 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 58.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 1152 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #