data_2CBO
#
_model_server_result.job_id            ISqsYk1sCKoWOLp4G-tfNw 
_model_server_result.datetime_utc      '2024-10-20 08:23:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2cbo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":121}' 
#
_entry.id    2CBO 
#
_exptl.entry_id    2CBO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              388.497 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TESTOSTERONE HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2CBO 
_cell.length_a            43.984 
_cell.length_b            43.984 
_cell.length_c            54.708 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2CBO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             88 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              88 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             93 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              93 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.027 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C23 H32 O5' 
_chem_comp.formula_weight    388.497 
_chem_comp.id                TH2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TESTOSTERONE HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '4-OXO-4-{[(8ALPHA,9BETA,10ALPHA,13ALPHA,14BETA,17ALPHA)-3-OXOANDROST-4-EN-17-YL]OXY}BUTANOIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 TH2 sing 275 n n 
C1 C10 TH2 sing 276 n n 
C1 H1C1 TH2 sing 277 n n 
C1 H1C2 TH2 sing 278 n n 
C2 C3 TH2 sing 279 n n 
C2 H2C1 TH2 sing 280 n n 
C2 H2C2 TH2 sing 281 n n 
C3 O3 TH2 doub 282 n n 
C3 C4 TH2 sing 283 n n 
C4 C5 TH2 doub 284 n n 
C4 H4 TH2 sing 285 n n 
C5 C6 TH2 sing 286 n n 
C5 C10 TH2 sing 287 n n 
C6 C7 TH2 sing 288 n n 
C6 H6C1 TH2 sing 289 n n 
C6 H6C2 TH2 sing 290 n n 
C7 C8 TH2 sing 291 n n 
C7 H7C1 TH2 sing 292 n n 
C7 H7C2 TH2 sing 293 n n 
C8 C9 TH2 sing 294 n n 
C8 C14 TH2 sing 295 n n 
C8 H8 TH2 sing 296 n n 
C9 C10 TH2 sing 297 n n 
C9 C11 TH2 sing 298 n n 
C9 H9 TH2 sing 299 n n 
C10 C19 TH2 sing 300 n n 
C11 C12 TH2 sing 301 n n 
C11 H111 TH2 sing 302 n n 
C11 H112 TH2 sing 303 n n 
C12 C13 TH2 sing 304 n n 
C12 H121 TH2 sing 305 n n 
C12 H122 TH2 sing 306 n n 
C13 C14 TH2 sing 307 n n 
C13 C17 TH2 sing 308 n n 
C13 C18 TH2 sing 309 n n 
C14 C15 TH2 sing 310 n n 
C14 H14 TH2 sing 311 n n 
C15 C16 TH2 sing 312 n n 
C15 H151 TH2 sing 313 n n 
C15 H152 TH2 sing 314 n n 
C16 C17 TH2 sing 315 n n 
C16 H161 TH2 sing 316 n n 
C16 H162 TH2 sing 317 n n 
C17 O17 TH2 sing 318 n n 
C17 H17 TH2 sing 319 n n 
O17 C20 TH2 sing 320 n n 
C18 H181 TH2 sing 321 n n 
C18 H182 TH2 sing 322 n n 
C18 H183 TH2 sing 323 n n 
C20 O20 TH2 doub 324 n n 
C20 C22 TH2 sing 325 n n 
C21 C22 TH2 sing 326 n n 
C21 C23 TH2 sing 327 n n 
C21 H211 TH2 sing 328 n n 
C21 H212 TH2 sing 329 n n 
C22 H221 TH2 sing 330 n n 
C22 H222 TH2 sing 331 n n 
C23 O23 TH2 doub 332 n n 
C23 O24 TH2 sing 333 n n 
O24 H24 TH2 sing 334 n n 
C19 H191 TH2 sing 335 n n 
C19 H192 TH2 sing 336 n n 
C19 H193 TH2 sing 337 n n 
#
_atom_sites.entry_id                     2CBO 
_atom_sites.fract_transf_matrix[1][1]    0.022736 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022736 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018279 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 117 117 SO4 SO4 . 
C 3 TH2 A 1 120 120 TH2 TH2 . 
D 3 TH2 A 1 121 121 TH2 TH2 . 
E 4 HOH A 1 2001 2001 HOH HOH . 
E 4 HOH A 2 2002 2002 HOH HOH . 
E 4 HOH A 3 2003 2003 HOH HOH . 
E 4 HOH A 4 2004 2004 HOH HOH . 
E 4 HOH A 5 2005 2005 HOH HOH . 
E 4 HOH A 6 2006 2006 HOH HOH . 
E 4 HOH A 7 2007 2007 HOH HOH . 
E 4 HOH A 8 2008 2008 HOH HOH . 
E 4 HOH A 9 2009 2009 HOH HOH . 
E 4 HOH A 10 2010 2010 HOH HOH . 
E 4 HOH A 11 2011 2011 HOH HOH . 
E 4 HOH A 12 2012 2012 HOH HOH . 
E 4 HOH A 13 2013 2013 HOH HOH . 
E 4 HOH A 14 2014 2014 HOH HOH . 
E 4 HOH A 15 2015 2015 HOH HOH . 
E 4 HOH A 16 2016 2016 HOH HOH . 
E 4 HOH A 17 2017 2017 HOH HOH . 
E 4 HOH A 18 2018 2018 HOH HOH . 
E 4 HOH A 19 2019 2019 HOH HOH . 
E 4 HOH A 20 2020 2020 HOH HOH . 
E 4 HOH A 21 2021 2021 HOH HOH . 
E 4 HOH A 22 2022 2022 HOH HOH . 
E 4 HOH A 23 2023 2023 HOH HOH . 
E 4 HOH A 24 2024 2024 HOH HOH . 
E 4 HOH A 25 2025 2025 HOH HOH . 
E 4 HOH A 26 2026 2026 HOH HOH . 
E 4 HOH A 27 2027 2027 HOH HOH . 
E 4 HOH A 28 2028 2028 HOH HOH . 
E 4 HOH A 29 2029 2029 HOH HOH . 
E 4 HOH A 30 2030 2030 HOH HOH . 
E 4 HOH A 31 2031 2031 HOH HOH . 
E 4 HOH A 32 2032 2032 HOH HOH . 
E 4 HOH A 33 2033 2033 HOH HOH . 
E 4 HOH A 34 2034 2034 HOH HOH . 
E 4 HOH A 35 2035 2035 HOH HOH . 
E 4 HOH A 36 2036 2036 HOH HOH . 
E 4 HOH A 37 2037 2037 HOH HOH . 
E 4 HOH A 38 2038 2038 HOH HOH . 
E 4 HOH A 39 2039 2039 HOH HOH . 
E 4 HOH A 40 2040 2040 HOH HOH . 
E 4 HOH A 41 2041 2041 HOH HOH . 
E 4 HOH A 42 2042 2042 HOH HOH . 
E 4 HOH A 43 2043 2043 HOH HOH . 
E 4 HOH A 44 2044 2044 HOH HOH . 
E 4 HOH A 45 2045 2045 HOH HOH . 
E 4 HOH A 46 2046 2046 HOH HOH . 
E 4 HOH A 47 2047 2047 HOH HOH . 
E 4 HOH A 48 2048 2048 HOH HOH . 
E 4 HOH A 49 2049 2049 HOH HOH . 
E 4 HOH A 50 2050 2050 HOH HOH . 
E 4 HOH A 51 2051 2051 HOH HOH . 
E 4 HOH A 52 2052 2052 HOH HOH . 
E 4 HOH A 53 2053 2053 HOH HOH . 
E 4 HOH A 54 2054 2054 HOH HOH . 
E 4 HOH A 55 2055 2055 HOH HOH . 
E 4 HOH A 56 2056 2056 HOH HOH . 
E 4 HOH A 57 2057 2057 HOH HOH . 
E 4 HOH A 58 2058 2058 HOH HOH . 
E 4 HOH A 59 2059 2059 HOH HOH . 
E 4 HOH A 60 2060 2060 HOH HOH . 
E 4 HOH A 61 2061 2061 HOH HOH . 
E 4 HOH A 62 2062 2062 HOH HOH . 
E 4 HOH A 63 2063 2063 HOH HOH . 
E 4 HOH A 64 2064 2064 HOH HOH . 
E 4 HOH A 65 2065 2065 HOH HOH . 
E 4 HOH A 66 2066 2066 HOH HOH . 
E 4 HOH A 67 2067 2067 HOH HOH . 
E 4 HOH A 68 2068 2068 HOH HOH . 
E 4 HOH A 69 2069 2069 HOH HOH . 
E 4 HOH A 70 2070 2070 HOH HOH . 
E 4 HOH A 71 2071 2071 HOH HOH . 
E 4 HOH A 72 2072 2072 HOH HOH . 
E 4 HOH A 73 2073 2073 HOH HOH . 
E 4 HOH A 74 2074 2074 HOH HOH . 
E 4 HOH A 75 2075 2075 HOH HOH . 
E 4 HOH A 76 2076 2076 HOH HOH . 
E 4 HOH A 77 2077 2077 HOH HOH . 
E 4 HOH A 78 2078 2078 HOH HOH . 
E 4 HOH A 79 2079 2079 HOH HOH . 
E 4 HOH A 80 2080 2080 HOH HOH . 
E 4 HOH A 81 2081 2081 HOH HOH . 
E 4 HOH A 82 2082 2082 HOH HOH . 
E 4 HOH A 83 2083 2083 HOH HOH . 
E 4 HOH A 84 2084 2084 HOH HOH . 
E 4 HOH A 85 2085 2085 HOH HOH . 
E 4 HOH A 86 2086 2086 HOH HOH . 
E 4 HOH A 87 2087 2087 HOH HOH . 
E 4 HOH A 88 2088 2088 HOH HOH . 
E 4 HOH A 89 2089 2089 HOH HOH . 
E 4 HOH A 90 2090 2090 HOH HOH . 
E 4 HOH A 91 2091 2091 HOH HOH . 
E 4 HOH A 92 2092 2092 HOH HOH . 
E 4 HOH A 93 2093 2093 HOH HOH . 
E 4 HOH A 94 2094 2094 HOH HOH . 
E 4 HOH A 95 2095 2095 HOH HOH . 
E 4 HOH A 96 2096 2096 HOH HOH . 
E 4 HOH A 97 2097 2097 HOH HOH . 
E 4 HOH A 98 2098 2098 HOH HOH . 
E 4 HOH A 99 2099 2099 HOH HOH . 
E 4 HOH A 100 2100 2100 HOH HOH . 
E 4 HOH A 101 2101 2101 HOH HOH . 
E 4 HOH A 102 2102 2102 HOH HOH . 
E 4 HOH A 103 2103 2103 HOH HOH . 
E 4 HOH A 104 2104 2104 HOH HOH . 
E 4 HOH A 105 2105 2105 HOH HOH . 
E 4 HOH A 106 2106 2106 HOH HOH . 
E 4 HOH A 107 2107 2107 HOH HOH . 
E 4 HOH A 108 2108 2108 HOH HOH . 
E 4 HOH A 109 2109 2109 HOH HOH . 
E 4 HOH A 110 2110 2110 HOH HOH . 
E 4 HOH A 111 2111 2111 HOH HOH . 
E 4 HOH A 112 2112 2112 HOH HOH . 
E 4 HOH A 113 2113 2113 HOH HOH . 
E 4 HOH A 114 2114 2114 HOH HOH . 
E 4 HOH A 115 2115 2115 HOH HOH . 
E 4 HOH A 116 2116 2116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TH2 . . . D 3 -1.829 20.181 3.459 1 29.06 ? C1 TH2 121 A 1 
HETATM 2 C C2 TH2 . . . D 3 -1.904 21.464 2.621 1 28.51 ? C2 TH2 121 A 1 
HETATM 3 C C3 TH2 . . . D 3 -1.028 22.531 3.16 1 28.17 ? C3 TH2 121 A 1 
HETATM 4 O O3 TH2 . . . D 3 -1.324 23.7 3.191 1 30.93 ? O3 TH2 121 A 1 
HETATM 5 C C4 TH2 . . . D 3 0.267 22.098 3.628 1 28.74 ? C4 TH2 121 A 1 
HETATM 6 C C5 TH2 . . . D 3 0.607 20.803 3.826 1 28.06 ? C5 TH2 121 A 1 
HETATM 7 C C6 TH2 . . . D 3 1.997 20.476 4.281 1 27.88 ? C6 TH2 121 A 1 
HETATM 8 C C7 TH2 . . . D 3 2.016 19.617 5.539 1 27.32 ? C7 TH2 121 A 1 
HETATM 9 C C8 TH2 . . . D 3 1.106 18.404 5.334 1 26.2 ? C8 TH2 121 A 1 
HETATM 10 C C9 TH2 . . . D 3 -0.321 18.763 4.9 1 25.55 ? C9 TH2 121 A 1 
HETATM 11 C C10 TH2 . . . D 3 -0.391 19.637 3.64 1 27.53 ? C10 TH2 121 A 1 
HETATM 12 C C11 TH2 . . . D 3 -1.27 17.556 4.717 1 25.71 ? C11 TH2 121 A 1 
HETATM 13 C C12 TH2 . . . D 3 -1.3 16.714 6.003 1 25.5 ? C12 TH2 121 A 1 
HETATM 14 C C13 TH2 . . . D 3 0.104 16.309 6.438 1 26.7 ? C13 TH2 121 A 1 
HETATM 15 C C14 TH2 . . . D 3 0.965 17.568 6.601 1 25.91 ? C14 TH2 121 A 1 
HETATM 16 C C15 TH2 . . . D 3 2.233 17.091 7.311 1 26.58 ? C15 TH2 121 A 1 
HETATM 17 C C16 TH2 . . . D 3 1.694 16.046 8.307 1 25.43 ? C16 TH2 121 A 1 
HETATM 18 C C17 TH2 . . . D 3 0.206 15.837 7.925 1 26.15 ? C17 TH2 121 A 1 
HETATM 19 O O17 TH2 . . . D 3 -0.288 14.515 8.168 1 27.55 ? O17 TH2 121 A 1 
HETATM 20 C C18 TH2 . . . D 3 0.742 15.291 5.473 1 25.04 ? C18 TH2 121 A 1 
HETATM 21 C C20 TH2 . . . D 3 -0.585 13.674 8.875 1 31.72 ? C20 TH2 121 A 1 
HETATM 22 O O20 TH2 . . . D 3 -0.348 14.023 10.056 1 29.77 ? O20 TH2 121 A 1 
HETATM 23 C C21 TH2 . . . D 3 -1.842 12.167 7.425 1 35.33 ? C21 TH2 121 A 1 
HETATM 24 C C22 TH2 . . . D 3 -1.414 12.434 8.879 1 31.93 ? C22 TH2 121 A 1 
HETATM 25 C C23 TH2 . . . D 3 -3.072 12.969 7.095 1 37.27 ? C23 TH2 121 A 1 
HETATM 26 O O23 TH2 . . . D 3 -3.778 12.523 6.157 1 38.87 ? O23 TH2 121 A 1 
HETATM 27 O O24 TH2 . . . D 3 -3.382 13.952 7.831 1 35.64 ? O24 TH2 121 A 1 
HETATM 28 C C19 TH2 . . . D 3 0.057 18.844 2.397 1 28.06 ? C19 TH2 121 A 1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#