data_2CBS # _model_server_result.job_id e8W6etkPYiq1sMpAjeP-7A _model_server_result.datetime_utc '2024-12-16 12:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cbs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 2CBS # _exptl.entry_id 2CBS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 338.483 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-METHYL-7-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL) -OCTA-2,4,6-TRIENOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CBS _cell.length_a 45.25 _cell.length_b 47.64 _cell.length_c 74.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H30 O2' _chem_comp.formula_weight 338.483 _chem_comp.id R13 _chem_comp.mon_nstd_flag . _chem_comp.name '3-METHYL-7-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL) -OCTA-2,4,6-TRIENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 R13 sing 256 n n C1 C10 R13 sing 257 n n C1 C20 R13 sing 258 n n C1 C21 R13 sing 259 n n C2 C3 R13 sing 260 n n C2 H21 R13 sing 261 n n C2 H22 R13 sing 262 n n C3 C4 R13 sing 263 n n C3 H31 R13 sing 264 n n C3 H32 R13 sing 265 n n C4 C5 R13 sing 266 n n C4 C18 R13 sing 267 n n C4 C19 R13 sing 268 n n C5 C6 R13 sing 269 n y C5 C10 R13 doub 270 n y C6 C7 R13 doub 271 n y C6 H6 R13 sing 272 n n C7 C8 R13 sing 273 n y C7 H7 R13 sing 274 n n C8 C9 R13 doub 275 n y C8 C11 R13 sing 276 n n C9 C10 R13 sing 277 n y C9 H9 R13 sing 278 n n C11 C12 R13 doub 279 e n C11 C22 R13 sing 280 n n C12 C13 R13 sing 281 n n C12 H12 R13 sing 282 n n C13 C14 R13 doub 283 e n C13 H13 R13 sing 284 n n C14 C15 R13 sing 285 n n C14 H14 R13 sing 286 n n C15 C16 R13 doub 287 e n C15 C23 R13 sing 288 n n C16 C17 R13 sing 289 n n C16 H16 R13 sing 290 n n C17 O1 R13 doub 291 n n C17 O2 R13 sing 292 n n C18 H181 R13 sing 293 n n C18 H182 R13 sing 294 n n C18 H183 R13 sing 295 n n C19 H191 R13 sing 296 n n C19 H192 R13 sing 297 n n C19 H193 R13 sing 298 n n C20 H201 R13 sing 299 n n C20 H202 R13 sing 300 n n C20 H203 R13 sing 301 n n C21 H211 R13 sing 302 n n C21 H212 R13 sing 303 n n C21 H213 R13 sing 304 n n C22 H221 R13 sing 305 n n C22 H222 R13 sing 306 n n C22 H223 R13 sing 307 n n C23 H231 R13 sing 308 n n C23 H232 R13 sing 309 n n C23 H233 R13 sing 310 n n O2 HO2 R13 sing 311 n n # _atom_sites.entry_id 2CBS _atom_sites.fract_transf_matrix[1][1] 0.022099 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013364 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 R13 A 1 200 200 R13 R13 . C 3 HOH A 1 201 -99999 HOH HOH . C 3 HOH A 2 202 -99999 HOH HOH . C 3 HOH A 3 203 -99999 HOH HOH . C 3 HOH A 4 204 -99999 HOH HOH . C 3 HOH A 5 205 -99999 HOH HOH . C 3 HOH A 6 206 -99999 HOH HOH . C 3 HOH A 7 207 -99999 HOH HOH . C 3 HOH A 8 208 -99999 HOH HOH . C 3 HOH A 9 209 -99999 HOH HOH . C 3 HOH A 10 210 -99999 HOH HOH . C 3 HOH A 11 211 -99999 HOH HOH . C 3 HOH A 12 212 -99999 HOH HOH . C 3 HOH A 13 213 -99999 HOH HOH . C 3 HOH A 14 214 -99999 HOH HOH . C 3 HOH A 15 215 -99999 HOH HOH . C 3 HOH A 16 216 -99999 HOH HOH . C 3 HOH A 17 217 -99999 HOH HOH . C 3 HOH A 18 218 -99999 HOH HOH . C 3 HOH A 19 219 -99999 HOH HOH . C 3 HOH A 20 220 -99999 HOH HOH . C 3 HOH A 21 221 -99999 HOH HOH . C 3 HOH A 22 222 -99999 HOH HOH . C 3 HOH A 23 223 -99999 HOH HOH . C 3 HOH A 24 224 -99999 HOH HOH . C 3 HOH A 25 225 -99999 HOH HOH . C 3 HOH A 26 226 -99999 HOH HOH . C 3 HOH A 27 227 -99999 HOH HOH . C 3 HOH A 28 228 -99999 HOH HOH . C 3 HOH A 29 229 -99999 HOH HOH . C 3 HOH A 30 230 -99999 HOH HOH . C 3 HOH A 31 231 -99999 HOH HOH . C 3 HOH A 32 232 -99999 HOH HOH . C 3 HOH A 33 233 -99999 HOH HOH . C 3 HOH A 34 234 -99999 HOH HOH . C 3 HOH A 35 235 -99999 HOH HOH . C 3 HOH A 36 236 -99999 HOH HOH . C 3 HOH A 37 237 -99999 HOH HOH . C 3 HOH A 38 238 -99999 HOH HOH . C 3 HOH A 39 239 -99999 HOH HOH . C 3 HOH A 40 240 -99999 HOH HOH . C 3 HOH A 41 241 -99999 HOH HOH . C 3 HOH A 42 242 -99999 HOH HOH . C 3 HOH A 43 243 -99999 HOH HOH . C 3 HOH A 44 244 -99999 HOH HOH . C 3 HOH A 45 245 -99999 HOH HOH . C 3 HOH A 46 246 -99999 HOH HOH . C 3 HOH A 47 247 -99999 HOH HOH . C 3 HOH A 48 248 -99999 HOH HOH . C 3 HOH A 49 249 -99999 HOH HOH . C 3 HOH A 50 250 -99999 HOH HOH . C 3 HOH A 51 251 -99999 HOH HOH . C 3 HOH A 52 252 -99999 HOH HOH . C 3 HOH A 53 253 -99999 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 R13 . . . B 2 22.032 30.598 16.095 1 17.64 ? C1 R13 200 A 1 HETATM 2 C C2 R13 . . . B 2 21.069 31.269 15.088 1 17.81 ? C2 R13 200 A 1 HETATM 3 C C3 R13 . . . B 2 20.41 30.244 14.11 1 17.95 ? C3 R13 200 A 1 HETATM 4 C C4 R13 . . . B 2 19.538 29.196 14.844 1 19.31 ? C4 R13 200 A 1 HETATM 5 C C5 R13 . . . B 2 20.269 28.607 16.104 1 16.63 ? C5 R13 200 A 1 HETATM 6 C C6 R13 . . . B 2 19.776 27.401 16.706 1 17.77 ? C6 R13 200 A 1 HETATM 7 C C7 R13 . . . B 2 20.403 26.855 17.848 1 16.24 ? C7 R13 200 A 1 HETATM 8 C C8 R13 . . . B 2 21.545 27.493 18.403 1 15.96 ? C8 R13 200 A 1 HETATM 9 C C9 R13 . . . B 2 22.061 28.678 17.821 1 16.73 ? C9 R13 200 A 1 HETATM 10 C C10 R13 . . . B 2 21.44 29.264 16.685 1 17.22 ? C10 R13 200 A 1 HETATM 11 C C11 R13 . . . B 2 22.247 26.918 19.674 1 15.7 ? C11 R13 200 A 1 HETATM 12 C C12 R13 . . . B 2 21.66 25.863 20.309 1 16.42 ? C12 R13 200 A 1 HETATM 13 C C13 R13 . . . B 2 22.154 25.303 21.478 1 15.91 ? C13 R13 200 A 1 HETATM 14 C C14 R13 . . . B 2 21.458 24.285 22.112 1 17.14 ? C14 R13 200 A 1 HETATM 15 C C15 R13 . . . B 2 21.904 23.709 23.314 1 17.01 ? C15 R13 200 A 1 HETATM 16 C C16 R13 . . . B 2 21.119 22.708 23.9 1 16.52 ? C16 R13 200 A 1 HETATM 17 C C17 R13 . . . B 2 21.375 21.995 25.162 1 19.38 ? C17 R13 200 A 1 HETATM 18 C C18 R13 . . . B 2 18.211 29.824 15.273 1 20.1 ? C18 R13 200 A 1 HETATM 19 C C19 R13 . . . B 2 19.206 28.087 13.843 1 19.9 ? C19 R13 200 A 1 HETATM 20 C C20 R13 . . . B 2 22.28 31.607 17.223 1 16.69 ? C20 R13 200 A 1 HETATM 21 C C21 R13 . . . B 2 23.381 30.321 15.428 1 17.08 ? C21 R13 200 A 1 HETATM 22 C C22 R13 . . . B 2 23.557 27.555 20.197 1 14.96 ? C22 R13 200 A 1 HETATM 23 C C23 R13 . . . B 2 23.224 24.181 23.991 1 15.21 ? C23 R13 200 A 1 HETATM 24 O O1 R13 . . . B 2 22.418 21.323 25.282 1 17.6 ? O1 R13 200 A 1 HETATM 25 O O2 R13 . . . B 2 20.549 22.095 26.09 1 17.34 ? O2 R13 200 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #