data_2CBT
#
_model_server_result.job_id            SoLkrqEZDEzWzgPIj8z69w 
_model_server_result.datetime_utc      '2024-12-23 12:19:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2cbt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2120}' 
#
_entry.id    2CBT 
#
_exptl.entry_id    2CBT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              388.497 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TESTOSTERONE HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2CBT 
_cell.length_a            52.51 
_cell.length_b            52.51 
_cell.length_c            128.91 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2CBT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C23 H32 O5' 
_chem_comp.formula_weight    388.497 
_chem_comp.id                TH2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TESTOSTERONE HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '4-OXO-4-{[(8ALPHA,9BETA,10ALPHA,13ALPHA,14BETA,17ALPHA)-3-OXOANDROST-4-EN-17-YL]OXY}BUTANOIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 TH2 sing 271 n n 
C1 C10 TH2 sing 272 n n 
C1 H1C1 TH2 sing 273 n n 
C1 H1C2 TH2 sing 274 n n 
C2 C3 TH2 sing 275 n n 
C2 H2C1 TH2 sing 276 n n 
C2 H2C2 TH2 sing 277 n n 
C3 O3 TH2 doub 278 n n 
C3 C4 TH2 sing 279 n n 
C4 C5 TH2 doub 280 n n 
C4 H4 TH2 sing 281 n n 
C5 C6 TH2 sing 282 n n 
C5 C10 TH2 sing 283 n n 
C6 C7 TH2 sing 284 n n 
C6 H6C1 TH2 sing 285 n n 
C6 H6C2 TH2 sing 286 n n 
C7 C8 TH2 sing 287 n n 
C7 H7C1 TH2 sing 288 n n 
C7 H7C2 TH2 sing 289 n n 
C8 C9 TH2 sing 290 n n 
C8 C14 TH2 sing 291 n n 
C8 H8 TH2 sing 292 n n 
C9 C10 TH2 sing 293 n n 
C9 C11 TH2 sing 294 n n 
C9 H9 TH2 sing 295 n n 
C10 C19 TH2 sing 296 n n 
C11 C12 TH2 sing 297 n n 
C11 H111 TH2 sing 298 n n 
C11 H112 TH2 sing 299 n n 
C12 C13 TH2 sing 300 n n 
C12 H121 TH2 sing 301 n n 
C12 H122 TH2 sing 302 n n 
C13 C14 TH2 sing 303 n n 
C13 C17 TH2 sing 304 n n 
C13 C18 TH2 sing 305 n n 
C14 C15 TH2 sing 306 n n 
C14 H14 TH2 sing 307 n n 
C15 C16 TH2 sing 308 n n 
C15 H151 TH2 sing 309 n n 
C15 H152 TH2 sing 310 n n 
C16 C17 TH2 sing 311 n n 
C16 H161 TH2 sing 312 n n 
C16 H162 TH2 sing 313 n n 
C17 O17 TH2 sing 314 n n 
C17 H17 TH2 sing 315 n n 
O17 C20 TH2 sing 316 n n 
C18 H181 TH2 sing 317 n n 
C18 H182 TH2 sing 318 n n 
C18 H183 TH2 sing 319 n n 
C20 O20 TH2 doub 320 n n 
C20 C22 TH2 sing 321 n n 
C21 C22 TH2 sing 322 n n 
C21 C23 TH2 sing 323 n n 
C21 H211 TH2 sing 324 n n 
C21 H212 TH2 sing 325 n n 
C22 H221 TH2 sing 326 n n 
C22 H222 TH2 sing 327 n n 
C23 O23 TH2 doub 328 n n 
C23 O24 TH2 sing 329 n n 
O24 H24 TH2 sing 330 n n 
C19 H191 TH2 sing 331 n n 
C19 H192 TH2 sing 332 n n 
C19 H193 TH2 sing 333 n n 
#
_atom_sites.entry_id                     2CBT 
_atom_sites.fract_transf_matrix[1][1]    0.019044 
_atom_sites.fract_transf_matrix[1][2]    0.010995 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02199 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007757 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TH2 A 1 1120 1120 TH2 TH2 . 
D 2 TH2 B 1 2120 2120 TH2 TH2 . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
E 3 HOH A 3 2003 2003 HOH HOH . 
E 3 HOH A 4 2004 2004 HOH HOH . 
E 3 HOH A 5 2005 2005 HOH HOH . 
E 3 HOH A 6 2006 2006 HOH HOH . 
E 3 HOH A 7 2007 2007 HOH HOH . 
E 3 HOH A 8 2008 2008 HOH HOH . 
E 3 HOH A 9 2009 2009 HOH HOH . 
E 3 HOH A 10 2010 2010 HOH HOH . 
E 3 HOH A 11 2011 2011 HOH HOH . 
E 3 HOH A 12 2012 2012 HOH HOH . 
E 3 HOH A 13 2013 2013 HOH HOH . 
E 3 HOH A 14 2014 2014 HOH HOH . 
E 3 HOH A 15 2015 2015 HOH HOH . 
E 3 HOH A 16 2016 2016 HOH HOH . 
F 3 HOH B 1 5001 5001 HOH HOH . 
F 3 HOH B 2 5002 5002 HOH HOH . 
F 3 HOH B 3 5003 5003 HOH HOH . 
F 3 HOH B 4 5004 5004 HOH HOH . 
F 3 HOH B 5 5005 5005 HOH HOH . 
F 3 HOH B 6 5006 5006 HOH HOH . 
F 3 HOH B 7 5007 5007 HOH HOH . 
F 3 HOH B 8 5008 5008 HOH HOH . 
F 3 HOH B 9 5009 5009 HOH HOH . 
F 3 HOH B 10 5010 5010 HOH HOH . 
F 3 HOH B 11 5011 5011 HOH HOH . 
F 3 HOH B 12 5012 5012 HOH HOH . 
F 3 HOH B 13 5013 5013 HOH HOH . 
F 3 HOH B 14 5014 5014 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TH2 . . . D 2 -20.346 -11.525 -8.284 1 4.19 ? C1 TH2 2120 B 1 
HETATM 2 C C2 TH2 . . . D 2 -19.046 -10.689 -8.407 1 4.04 ? C2 TH2 2120 B 1 
HETATM 3 C C3 TH2 . . . D 2 -19.116 -9.623 -9.456 1 5.45 ? C3 TH2 2120 B 1 
HETATM 4 O O3 TH2 . . . D 2 -18.262 -9.394 -10.264 1 18.49 ? O3 TH2 2120 B 1 
HETATM 5 C C4 TH2 . . . D 2 -20.324 -8.808 -9.399 1 3.05 ? C4 TH2 2120 B 1 
HETATM 6 C C5 TH2 . . . D 2 -21.463 -9.227 -8.762 1 9.92 ? C5 TH2 2120 B 1 
HETATM 7 C C6 TH2 . . . D 2 -22.679 -8.33 -8.698 1 13.68 ? C6 TH2 2120 B 1 
HETATM 8 C C7 TH2 . . . D 2 -23.909 -9.013 -9.277 1 15.4 ? C7 TH2 2120 B 1 
HETATM 9 C C8 TH2 . . . D 2 -24.173 -10.319 -8.471 1 10.3 ? C8 TH2 2120 B 1 
HETATM 10 C C9 TH2 . . . D 2 -22.934 -11.292 -8.588 1 8.81 ? C9 TH2 2120 B 1 
HETATM 11 C C10 TH2 . . . D 2 -21.601 -10.625 -8.014 1 8.54 ? C10 TH2 2120 B 1 
HETATM 12 C C11 TH2 . . . D 2 -23.145 -12.653 -7.824 1 11.73 ? C11 TH2 2120 B 1 
HETATM 13 C C12 TH2 . . . D 2 -24.434 -13.304 -8.406 1 6.13 ? C12 TH2 2120 B 1 
HETATM 14 C C13 TH2 . . . D 2 -25.692 -12.401 -8.208 1 7.12 ? C13 TH2 2120 B 1 
HETATM 15 C C14 TH2 . . . D 2 -25.417 -11.074 -9.02 1 5.67 ? C14 TH2 2120 B 1 
HETATM 16 C C15 TH2 . . . D 2 -26.741 -10.315 -9.024 1 7.86 ? C15 TH2 2120 B 1 
HETATM 17 C C16 TH2 . . . D 2 -27.776 -11.449 -9.059 1 13.01 ? C16 TH2 2120 B 1 
HETATM 18 C C17 TH2 . . . D 2 -27.008 -12.817 -8.921 1 11.71 ? C17 TH2 2120 B 1 
HETATM 19 O O17 TH2 . . . D 2 -27.65 -14.032 -8.658 1 16.74 ? O17 TH2 2120 B 1 
HETATM 20 C C18 TH2 . . . D 2 -26.011 -12.213 -6.687 1 3.15 ? C18 TH2 2120 B 1 
HETATM 21 C C20 TH2 . . . D 2 -28.201 -14.373 -7.573 1 17.55 ? C20 TH2 2120 B 1 
HETATM 22 O O20 TH2 . . . D 2 -27.776 -14.409 -6.385 1 37.89 ? O20 TH2 2120 B 1 
HETATM 23 C C21 TH2 . . . D 2 -29.577 -16.379 -8.009 1 18.92 ? C21 TH2 2120 B 1 
HETATM 24 C C22 TH2 . . . D 2 -29.593 -14.86 -7.743 1 16.95 ? C22 TH2 2120 B 1 
HETATM 25 C C23 TH2 . . . D 2 -30.638 -16.713 -9.047 1 20.63 ? C23 TH2 2120 B 1 
HETATM 26 O O23 TH2 . . . D 2 -31.326 -15.749 -9.473 1 32.37 ? O23 TH2 2120 B 1 
HETATM 27 O O24 TH2 . . . D 2 -30.751 -17.93 -9.42 1 27.87 ? O24 TH2 2120 B 1 
HETATM 28 C C19 TH2 . . . D 2 -21.76 -10.36 -6.48 1 18.18 ? C19 TH2 2120 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           28 
#