data_2CLA # _model_server_result.job_id 4BKhDEWYineAL4gccM9oGA _model_server_result.datetime_utc '2024-10-19 03:45:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cla # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":223}' # _entry.id 2CLA # _exptl.entry_id 2CLA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2CLA _cell.length_a 107.7 _cell.length_b 107.7 _cell.length_c 124.4 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CLA _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1,2,3 A,B,C,D 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 18 A GLU 23 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc2 A OE2 GLU 18 A GLU 23 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc3 A OE2 GLU 18 A GLU 23 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc4 A OE1 GLU 18 A GLU 23 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc5 A ND1 HIS 22 A HIS 27 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc6 A ND1 HIS 22 A HIS 27 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc7 C CO CO . A CO 223 1_555 D O HOH . A HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc8 C CO CO . A CO 223 1_555 D O HOH . A HOH 282 12_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2CLA _atom_sites.fract_transf_matrix[1][1] 0.009285 _atom_sites.fract_transf_matrix[1][2] 0.005361 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 222 222 CO CO . C 2 CO A 1 223 223 CO CO . D 3 HOH A 1 224 224 HOH HOH . D 3 HOH A 2 225 225 HOH HOH . D 3 HOH A 3 226 226 HOH HOH . D 3 HOH A 4 227 227 HOH HOH . D 3 HOH A 5 228 228 HOH HOH . D 3 HOH A 6 229 229 HOH HOH . D 3 HOH A 7 230 230 HOH HOH . D 3 HOH A 8 235 235 HOH HOH . D 3 HOH A 9 236 236 HOH HOH . D 3 HOH A 10 237 237 HOH HOH . D 3 HOH A 11 238 238 HOH HOH . D 3 HOH A 12 240 240 HOH HOH . D 3 HOH A 13 242 242 HOH HOH . D 3 HOH A 14 243 243 HOH HOH . D 3 HOH A 15 244 244 HOH HOH . D 3 HOH A 16 245 245 HOH HOH . D 3 HOH A 17 246 246 HOH HOH . D 3 HOH A 18 247 247 HOH HOH . D 3 HOH A 19 248 248 HOH HOH . D 3 HOH A 20 250 250 HOH HOH . D 3 HOH A 21 252 252 HOH HOH . D 3 HOH A 22 257 257 HOH HOH . D 3 HOH A 23 258 258 HOH HOH . D 3 HOH A 24 259 259 HOH HOH . D 3 HOH A 25 261 261 HOH HOH . D 3 HOH A 26 264 264 HOH HOH . D 3 HOH A 27 268 268 HOH HOH . D 3 HOH A 28 269 269 HOH HOH . D 3 HOH A 29 270 270 HOH HOH . D 3 HOH A 30 271 271 HOH HOH . D 3 HOH A 31 272 272 HOH HOH . D 3 HOH A 32 274 274 HOH HOH . D 3 HOH A 33 277 277 HOH HOH . D 3 HOH A 34 279 279 HOH HOH . D 3 HOH A 35 282 282 HOH HOH . D 3 HOH A 36 283 283 HOH HOH . D 3 HOH A 37 286 286 HOH HOH . D 3 HOH A 38 290 290 HOH HOH . D 3 HOH A 39 292 292 HOH HOH . D 3 HOH A 40 293 293 HOH HOH . D 3 HOH A 41 294 294 HOH HOH . D 3 HOH A 42 296 296 HOH HOH . D 3 HOH A 43 299 299 HOH HOH . D 3 HOH A 44 301 301 HOH HOH . D 3 HOH A 45 302 302 HOH HOH . D 3 HOH A 46 304 304 HOH HOH . D 3 HOH A 47 306 306 HOH HOH . D 3 HOH A 48 310 310 HOH HOH . D 3 HOH A 49 311 311 HOH HOH . D 3 HOH A 50 314 314 HOH HOH . D 3 HOH A 51 320 320 HOH HOH . D 3 HOH A 52 321 321 HOH HOH . D 3 HOH A 53 322 322 HOH HOH . D 3 HOH A 54 324 324 HOH HOH . D 3 HOH A 55 325 325 HOH HOH . D 3 HOH A 56 327 327 HOH HOH . D 3 HOH A 57 329 329 HOH HOH . D 3 HOH A 58 334 334 HOH HOH . D 3 HOH A 59 335 335 HOH HOH . D 3 HOH A 60 338 338 HOH HOH . D 3 HOH A 61 345 345 HOH HOH . D 3 HOH A 62 347 347 HOH HOH . D 3 HOH A 63 348 348 HOH HOH . D 3 HOH A 64 359 359 HOH HOH . D 3 HOH A 65 363 363 HOH HOH . D 3 HOH A 66 394 394 HOH HOH . D 3 HOH A 67 396 396 HOH HOH . D 3 HOH A 68 408 408 HOH HOH . D 3 HOH A 69 418 418 HOH HOH . D 3 HOH A 70 421 421 HOH HOH . D 3 HOH A 71 441 441 HOH HOH . D 3 HOH A 72 461 461 HOH HOH . D 3 HOH A 73 474 474 HOH HOH . D 3 HOH A 74 475 475 HOH HOH . D 3 HOH A 75 476 476 HOH HOH . D 3 HOH A 76 477 477 HOH HOH . D 3 HOH A 77 478 478 HOH HOH . D 3 HOH A 78 479 479 HOH HOH . D 3 HOH A 79 480 480 HOH HOH . D 3 HOH A 80 481 481 HOH HOH . D 3 HOH A 81 482 482 HOH HOH . D 3 HOH A 82 483 483 HOH HOH . D 3 HOH A 83 484 484 HOH HOH . D 3 HOH A 84 485 485 HOH HOH . D 3 HOH A 85 486 486 HOH HOH . D 3 HOH A 86 487 487 HOH HOH . D 3 HOH A 87 488 488 HOH HOH . D 3 HOH A 88 489 489 HOH HOH . D 3 HOH A 89 490 490 HOH HOH . D 3 HOH A 90 491 491 HOH HOH . D 3 HOH A 91 492 492 HOH HOH . D 3 HOH A 92 493 493 HOH HOH . D 3 HOH A 93 494 494 HOH HOH . D 3 HOH A 94 495 495 HOH HOH . D 3 HOH A 95 496 496 HOH HOH . D 3 HOH A 96 497 497 HOH HOH . D 3 HOH A 97 498 498 HOH HOH . D 3 HOH A 98 499 499 HOH HOH . D 3 HOH A 99 500 500 HOH HOH . D 3 HOH A 100 501 501 HOH HOH . D 3 HOH A 101 502 502 HOH HOH . D 3 HOH A 102 503 503 HOH HOH . D 3 HOH A 103 504 504 HOH HOH . D 3 HOH A 104 505 505 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.303 _atom_site.Cartn_y 20.015 _atom_site.Cartn_z 20.516 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 33.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 223 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #