data_2CME # _model_server_result.job_id SQeFKiE4GcX4CruoJeZRbQ _model_server_result.datetime_utc '2024-11-21 18:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cme # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1099}' # _entry.id 2CME # _exptl.entry_id 2CME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 142.282 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CME _cell.length_a 140.028 _cell.length_b 140.028 _cell.length_c 45.146 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CME _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 PQS dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M 1 1 C,D,J,N,O 2 1 E,F,K,P 3 1 G,H,L,Q,R 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N # _chem_comp.formula 'C10 H22' _chem_comp.formula_weight 142.282 _chem_comp.id D10 _chem_comp.mon_nstd_flag . _chem_comp.name DECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 D10 sing 70 n n C1 H11 D10 sing 71 n n C1 H12 D10 sing 72 n n C1 H13 D10 sing 73 n n C2 C3 D10 sing 74 n n C2 H21 D10 sing 75 n n C2 H22 D10 sing 76 n n C3 C4 D10 sing 77 n n C3 H31 D10 sing 78 n n C3 H32 D10 sing 79 n n C4 C5 D10 sing 80 n n C4 H41 D10 sing 81 n n C4 H42 D10 sing 82 n n C5 C6 D10 sing 83 n n C5 H51 D10 sing 84 n n C5 H52 D10 sing 85 n n C6 C7 D10 sing 86 n n C6 H61 D10 sing 87 n n C6 H62 D10 sing 88 n n C7 C8 D10 sing 89 n n C7 H71 D10 sing 90 n n C7 H72 D10 sing 91 n n C8 C9 D10 sing 92 n n C8 H81 D10 sing 93 n n C8 H82 D10 sing 94 n n C9 C10 D10 sing 95 n n C9 H91 D10 sing 96 n n C9 H92 D10 sing 97 n n C10 H101 D10 sing 98 n n C10 H102 D10 sing 99 n n C10 H103 D10 sing 100 n n # _atom_sites.entry_id 2CME _atom_sites.fract_transf_matrix[1][1] 0.007141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 D10 B 1 1099 1099 D10 D10 . J 5 D10 C 1 1099 1099 D10 D10 . K 5 D10 F 1 1099 1099 D10 D10 . L 5 D10 H 1 1099 1099 D10 D10 . M 6 HOH B 1 2001 2001 HOH HOH . M 6 HOH B 2 2002 2002 HOH HOH . N 6 HOH C 1 2001 2001 HOH HOH . O 6 HOH D 1 2001 2001 HOH HOH . P 6 HOH F 1 2001 2001 HOH HOH . Q 6 HOH G 1 2001 2001 HOH HOH . R 6 HOH H 1 2001 2001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D10 . . . L 5 90.794 18.368 1.986 1 60.72 ? C1 D10 1099 H 1 HETATM 2 C C2 D10 . . . L 5 90.594 18.763 0.505 1 48.53 ? C2 D10 1099 H 1 HETATM 3 C C3 D10 . . . L 5 89.983 17.436 -0.003 1 36.46 ? C3 D10 1099 H 1 HETATM 4 C C4 D10 . . . L 5 89.855 17.34 -1.53 1 49.18 ? C4 D10 1099 H 1 HETATM 5 C C5 D10 . . . L 5 89.243 15.969 -1.884 1 49.37 ? C5 D10 1099 H 1 HETATM 6 C C6 D10 . . . L 5 89.087 15.853 -3.417 1 39.36 ? C6 D10 1099 H 1 HETATM 7 C C7 D10 . . . L 5 88.452 14.49 -3.766 1 60.39 ? C7 D10 1099 H 1 HETATM 8 C C8 D10 . . . L 5 86.962 14.393 -3.299 1 67.3 ? C8 D10 1099 H 1 HETATM 9 C C9 D10 . . . L 5 86.276 13.175 -3.985 1 64.31 ? C9 D10 1099 H 1 HETATM 10 C C10 D10 . . . L 5 84.803 13.06 -3.541 1 61.15 ? C10 D10 1099 H 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #