data_2CMM # _model_server_result.job_id LrMVdzuvsLJnWIG2HF0q0Q _model_server_result.datetime_utc '2024-11-29 22:01:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cmm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":155}' # _entry.id 2CMM # _exptl.entry_id 2CMM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 364.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PORPHYRIN FE(III)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CMM _cell.length_a 57.62 _cell.length_b 76.23 _cell.length_c 33.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE POR . A POR 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc2 B C CYN . A CYN 154 1_555 C FE POR . A POR 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc3 B N CYN . A CYN 154 1_555 C FE POR . A POR 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? # _chem_comp.formula 'C20 H12 Fe N4' _chem_comp.formula_weight 364.181 _chem_comp.id POR _chem_comp.mon_nstd_flag . _chem_comp.name 'PORPHYRIN FE(III)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA POR sing 248 n n FE NB POR sing 249 n n FE NC POR sing 250 n n FE ND POR sing 251 n n CHA C1A POR doub 252 n n CHA C4D POR sing 253 n n CHA HHA POR sing 254 n n CHB C4A POR sing 255 n n CHB C1B POR doub 256 n n CHB HHB POR sing 257 n n CHC C4B POR doub 258 n n CHC C1C POR sing 259 n n CHC HHC POR sing 260 n n CHD C4C POR doub 261 n n CHD C1D POR sing 262 n n CHD HHD POR sing 263 n n NA C1A POR sing 264 n n NA C4A POR doub 265 n n C1A C2A POR sing 266 n n C2A C3A POR doub 267 n n C2A H2A POR sing 268 n n C3A C4A POR sing 269 n n C3A H3A POR sing 270 n n NB C1B POR sing 271 n n NB C4B POR sing 272 n n C1B C2B POR sing 273 n n C2B C3B POR doub 274 n n C2B H2B POR sing 275 n n C3B C4B POR sing 276 n n C3B H3B POR sing 277 n n NC C1C POR doub 278 n n NC C4C POR sing 279 n n C1C C2C POR sing 280 n n C2C C3C POR doub 281 n n C2C H2C POR sing 282 n n C3C C4C POR sing 283 n n C3C H3C POR sing 284 n n ND C1D POR sing 285 n y ND C4D POR sing 286 n y C1D C2D POR doub 287 n y C2D C3D POR sing 288 n y C2D H2D POR sing 289 n n C3D C4D POR doub 290 n y C3D H3D POR sing 291 n n # _atom_sites.entry_id 2CMM _atom_sites.fract_transf_matrix[1][1] 0.017355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030066 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CYN A 1 154 154 CYN CYN . C 3 POR A 1 155 154 POR POR . D 4 HOH A 1 201 201 HOH HOH . D 4 HOH A 2 202 202 HOH HOH . D 4 HOH A 3 203 203 HOH HOH . D 4 HOH A 4 204 204 HOH HOH . D 4 HOH A 5 205 205 HOH HOH . D 4 HOH A 6 206 206 HOH HOH . D 4 HOH A 7 207 207 HOH HOH . D 4 HOH A 8 208 208 HOH HOH . D 4 HOH A 9 209 209 HOH HOH . D 4 HOH A 10 210 210 HOH HOH . D 4 HOH A 11 211 211 HOH HOH . D 4 HOH A 12 212 212 HOH HOH . D 4 HOH A 13 213 213 HOH HOH . D 4 HOH A 14 214 214 HOH HOH . D 4 HOH A 15 215 215 HOH HOH . D 4 HOH A 16 216 216 HOH HOH . D 4 HOH A 17 217 217 HOH HOH . D 4 HOH A 18 218 218 HOH HOH . D 4 HOH A 19 219 219 HOH HOH . D 4 HOH A 20 220 220 HOH HOH . D 4 HOH A 21 221 221 HOH HOH . D 4 HOH A 22 222 222 HOH HOH . D 4 HOH A 23 223 223 HOH HOH . D 4 HOH A 24 224 224 HOH HOH . D 4 HOH A 25 225 225 HOH HOH . D 4 HOH A 26 226 226 HOH HOH . D 4 HOH A 27 227 227 HOH HOH . D 4 HOH A 28 228 228 HOH HOH . D 4 HOH A 29 229 229 HOH HOH . D 4 HOH A 30 230 230 HOH HOH . D 4 HOH A 31 231 231 HOH HOH . D 4 HOH A 32 232 232 HOH HOH . D 4 HOH A 33 233 233 HOH HOH . D 4 HOH A 34 234 234 HOH HOH . D 4 HOH A 35 235 235 HOH HOH . D 4 HOH A 36 236 236 HOH HOH . D 4 HOH A 37 237 237 HOH HOH . D 4 HOH A 38 238 238 HOH HOH . D 4 HOH A 39 239 239 HOH HOH . D 4 HOH A 40 240 240 HOH HOH . D 4 HOH A 41 241 241 HOH HOH . D 4 HOH A 42 242 242 HOH HOH . D 4 HOH A 43 243 243 HOH HOH . D 4 HOH A 44 244 244 HOH HOH . D 4 HOH A 45 245 245 HOH HOH . D 4 HOH A 46 246 246 HOH HOH . D 4 HOH A 47 247 247 HOH HOH . D 4 HOH A 48 248 248 HOH HOH . D 4 HOH A 49 249 249 HOH HOH . D 4 HOH A 50 250 250 HOH HOH . D 4 HOH A 51 251 251 HOH HOH . D 4 HOH A 52 252 252 HOH HOH . D 4 HOH A 53 253 253 HOH HOH . D 4 HOH A 54 254 254 HOH HOH . D 4 HOH A 55 255 255 HOH HOH . D 4 HOH A 56 256 256 HOH HOH . D 4 HOH A 57 257 257 HOH HOH . D 4 HOH A 58 258 258 HOH HOH . D 4 HOH A 59 269 269 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE POR . . . C 3 23.365 35.833 16.673 1 17.1 ? FE POR 155 A 1 HETATM 2 C CHA POR . . . C 3 22.959 39.191 17.183 1 16.2 ? CHA POR 155 A 1 HETATM 3 C CHB POR . . . C 3 21.028 35.169 19.055 1 17.26 ? CHB POR 155 A 1 HETATM 4 C CHC POR . . . C 3 23.662 32.435 16.03 1 17.03 ? CHC POR 155 A 1 HETATM 5 C CHD POR . . . C 3 25.654 36.457 14.298 1 17.35 ? CHD POR 155 A 1 HETATM 6 N NA POR . . . C 3 22.299 36.951 17.953 1 17.67 ? NA POR 155 A 1 HETATM 7 C C1A POR . . . C 3 22.302 38.351 18.019 1 16.56 ? C1A POR 155 A 1 HETATM 8 C C2A POR . . . C 3 21.294 38.757 18.971 1 16.97 ? C2A POR 155 A 1 HETATM 9 C C3A POR . . . C 3 20.691 37.647 19.35 1 16.77 ? C3A POR 155 A 1 HETATM 10 C C4A POR . . . C 3 21.509 36.501 19.013 1 16.75 ? C4A POR 155 A 1 HETATM 11 N NB POR . . . C 3 22.602 34.156 17.463 1 16.98 ? NB POR 155 A 1 HETATM 12 C C1B POR . . . C 3 21.484 34.104 18.299 1 16.82 ? C1B POR 155 A 1 HETATM 13 C C2B POR . . . C 3 21.409 32.705 18.739 1 17.86 ? C2B POR 155 A 1 HETATM 14 C C3B POR . . . C 3 22.003 31.959 17.791 1 16.92 ? C3B POR 155 A 1 HETATM 15 C C4B POR . . . C 3 22.896 32.83 17.125 1 17.21 ? C4B POR 155 A 1 HETATM 16 N NC POR . . . C 3 24.396 34.691 15.36 1 17.45 ? NC POR 155 A 1 HETATM 17 C C1C POR . . . C 3 24.459 33.283 15.304 1 17.17 ? C1C POR 155 A 1 HETATM 18 C C2C POR . . . C 3 25.638 32.902 14.57 1 17.9 ? C2C POR 155 A 1 HETATM 19 C C3C POR . . . C 3 26.103 34.022 13.958 1 18.14 ? C3C POR 155 A 1 HETATM 20 C C4C POR . . . C 3 25.436 35.146 14.571 1 17.66 ? C4C POR 155 A 1 HETATM 21 N ND POR . . . C 3 24.101 37.476 15.831 1 17.77 ? ND POR 155 A 1 HETATM 22 C C1D POR . . . C 3 25.164 37.536 14.939 1 17.75 ? C1D POR 155 A 1 HETATM 23 C C2D POR . . . C 3 25.641 38.873 14.814 1 18.47 ? C2D POR 155 A 1 HETATM 24 C C3D POR . . . C 3 24.869 39.614 15.649 1 18.46 ? C3D POR 155 A 1 HETATM 25 C C4D POR . . . C 3 23.803 38.788 16.162 1 18.08 ? C4D POR 155 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #