data_2CND # _model_server_result.job_id VCIWaBh9gSa7sPtM6JdVaA _model_server_result.datetime_utc '2024-11-05 00:36:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cnd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":271}' # _entry.id 2CND # _exptl.entry_id 2CND _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2CND _cell.length_a 145.2 _cell.length_b 145.2 _cell.length_c 47.5 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CND _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2CND _atom_sites.fract_transf_matrix[1][1] 0.006887 _atom_sites.fract_transf_matrix[1][2] 0.003976 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 271 271 FAD FAD . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 313 HOH HOH . C 3 HOH A 14 314 314 HOH HOH . C 3 HOH A 15 315 315 HOH HOH . C 3 HOH A 16 316 316 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 318 HOH HOH . C 3 HOH A 19 319 319 HOH HOH . C 3 HOH A 20 320 320 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 322 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 324 HOH HOH . C 3 HOH A 25 325 325 HOH HOH . C 3 HOH A 26 326 326 HOH HOH . C 3 HOH A 27 327 327 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 329 HOH HOH . C 3 HOH A 30 330 330 HOH HOH . C 3 HOH A 31 331 331 HOH HOH . C 3 HOH A 32 332 332 HOH HOH . C 3 HOH A 33 333 333 HOH HOH . C 3 HOH A 34 334 334 HOH HOH . C 3 HOH A 35 335 335 HOH HOH . C 3 HOH A 36 336 336 HOH HOH . C 3 HOH A 37 337 337 HOH HOH . C 3 HOH A 38 338 338 HOH HOH . C 3 HOH A 39 339 339 HOH HOH . C 3 HOH A 40 340 340 HOH HOH . C 3 HOH A 41 341 341 HOH HOH . C 3 HOH A 42 342 342 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 344 HOH HOH . C 3 HOH A 45 345 345 HOH HOH . C 3 HOH A 46 346 346 HOH HOH . C 3 HOH A 47 347 347 HOH HOH . C 3 HOH A 48 348 348 HOH HOH . C 3 HOH A 49 349 349 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 351 HOH HOH . C 3 HOH A 52 352 352 HOH HOH . C 3 HOH A 53 353 353 HOH HOH . C 3 HOH A 54 354 354 HOH HOH . C 3 HOH A 55 355 355 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 358 HOH HOH . C 3 HOH A 59 359 359 HOH HOH . C 3 HOH A 60 360 360 HOH HOH . C 3 HOH A 61 361 361 HOH HOH . C 3 HOH A 62 362 362 HOH HOH . C 3 HOH A 63 363 363 HOH HOH . C 3 HOH A 64 364 364 HOH HOH . C 3 HOH A 65 365 365 HOH HOH . C 3 HOH A 66 366 366 HOH HOH . C 3 HOH A 67 367 367 HOH HOH . C 3 HOH A 68 368 368 HOH HOH . C 3 HOH A 69 369 369 HOH HOH . C 3 HOH A 70 370 370 HOH HOH . C 3 HOH A 71 371 371 HOH HOH . C 3 HOH A 72 372 372 HOH HOH . C 3 HOH A 73 373 373 HOH HOH . C 3 HOH A 74 374 374 HOH HOH . C 3 HOH A 75 375 375 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 22.91 15.646 4.069 1 44.83 ? PA FAD 271 A 1 HETATM 2 O O1A FAD . . . B 2 24.214 15.352 4.749 1 48.55 ? O1A FAD 271 A 1 HETATM 3 O O2A FAD . . . B 2 22.871 16.375 2.778 1 33.51 ? O2A FAD 271 A 1 HETATM 4 O O5B FAD . . . B 2 22.119 14.228 3.898 1 48.01 ? O5B FAD 271 A 1 HETATM 5 C C5B FAD . . . B 2 20.701 14.072 3.585 1 44.5 ? C5B FAD 271 A 1 HETATM 6 C C4B FAD . . . B 2 20.379 12.61 3.292 1 36.63 ? C4B FAD 271 A 1 HETATM 7 O O4B FAD . . . B 2 20.842 11.685 4.328 1 30.81 ? O4B FAD 271 A 1 HETATM 8 C C3B FAD . . . B 2 18.899 12.531 3.269 1 31.59 ? C3B FAD 271 A 1 HETATM 9 O O3B FAD . . . B 2 18.574 11.574 2.261 1 36.68 ? O3B FAD 271 A 1 HETATM 10 C C2B FAD . . . B 2 18.607 11.969 4.64 1 23.55 ? C2B FAD 271 A 1 HETATM 11 O O2B FAD . . . B 2 17.493 11.067 4.619 1 34.42 ? O2B FAD 271 A 1 HETATM 12 C C1B FAD . . . B 2 19.733 11.069 4.925 1 20.88 ? C1B FAD 271 A 1 HETATM 13 N N9A FAD . . . B 2 19.842 10.855 6.353 1 24.15 ? N9A FAD 271 A 1 HETATM 14 C C8A FAD . . . B 2 20.949 10.907 7.081 1 19.39 ? C8A FAD 271 A 1 HETATM 15 N N7A FAD . . . B 2 20.685 10.552 8.349 1 21.45 ? N7A FAD 271 A 1 HETATM 16 C C5A FAD . . . B 2 19.388 10.342 8.386 1 21.57 ? C5A FAD 271 A 1 HETATM 17 C C6A FAD . . . B 2 18.645 10.016 9.514 1 31.66 ? C6A FAD 271 A 1 HETATM 18 N N6A FAD . . . B 2 19.098 9.976 10.778 1 18.46 ? N6A FAD 271 A 1 HETATM 19 N N1A FAD . . . B 2 17.312 9.879 9.291 1 39.1 ? N1A FAD 271 A 1 HETATM 20 C C2A FAD . . . B 2 16.752 10.059 8.081 1 31.77 ? C2A FAD 271 A 1 HETATM 21 N N3A FAD . . . B 2 17.513 10.301 7.013 1 25.65 ? N3A FAD 271 A 1 HETATM 22 C C4A FAD . . . B 2 18.845 10.478 7.15 1 22.54 ? C4A FAD 271 A 1 HETATM 23 N N1 FAD . . . B 2 14.955 21.34 5.968 1 8.02 ? N1 FAD 271 A 1 HETATM 24 C C2 FAD . . . B 2 14.575 21.832 7.211 1 11.78 ? C2 FAD 271 A 1 HETATM 25 O O2 FAD . . . B 2 14.861 21.26 8.214 1 20.24 ? O2 FAD 271 A 1 HETATM 26 N N3 FAD . . . B 2 13.878 22.996 7.195 1 11.22 ? N3 FAD 271 A 1 HETATM 27 C C4 FAD . . . B 2 13.61 23.675 6.028 1 9.66 ? C4 FAD 271 A 1 HETATM 28 O O4 FAD . . . B 2 12.97 24.678 6.07 1 20.88 ? O4 FAD 271 A 1 HETATM 29 C C4X FAD . . . B 2 14.094 23.133 4.825 1 10.58 ? C4X FAD 271 A 1 HETATM 30 N N5 FAD . . . B 2 13.73 23.79 3.694 1 17.85 ? N5 FAD 271 A 1 HETATM 31 C C5X FAD . . . B 2 14.128 23.406 2.465 1 13.92 ? C5X FAD 271 A 1 HETATM 32 C C6 FAD . . . B 2 13.774 24.207 1.404 1 19 ? C6 FAD 271 A 1 HETATM 33 C C7 FAD . . . B 2 14.232 23.925 0.129 1 11.24 ? C7 FAD 271 A 1 HETATM 34 C C7M FAD . . . B 2 13.683 24.678 -0.971 1 11.42 ? C7M FAD 271 A 1 HETATM 35 C C8 FAD . . . B 2 15.037 22.846 -0.07 1 16.88 ? C8 FAD 271 A 1 HETATM 36 C C8M FAD . . . B 2 15.323 22.33 -1.373 1 14.21 ? C8M FAD 271 A 1 HETATM 37 C C9 FAD . . . B 2 15.39 22.066 1.008 1 24.92 ? C9 FAD 271 A 1 HETATM 38 C C9A FAD . . . B 2 14.954 22.308 2.316 1 17.75 ? C9A FAD 271 A 1 HETATM 39 N N10 FAD . . . B 2 15.301 21.617 3.514 1 18.32 ? N10 FAD 271 A 1 HETATM 40 C C10 FAD . . . B 2 14.832 21.976 4.743 1 8.99 ? C10 FAD 271 A 1 HETATM 41 C C1' FAD . . . B 2 16.208 20.596 3.549 1 24.53 ? C1' FAD 271 A 1 HETATM 42 C C2' FAD . . . B 2 17.734 20.847 3.393 1 21.95 ? C2' FAD 271 A 1 HETATM 43 O O2' FAD . . . B 2 17.923 20.957 1.976 1 30.67 ? O2' FAD 271 A 1 HETATM 44 C C3' FAD . . . B 2 18.691 19.732 3.844 1 13.47 ? C3' FAD 271 A 1 HETATM 45 O O3' FAD . . . B 2 19.047 18.781 2.856 1 15.74 ? O3' FAD 271 A 1 HETATM 46 C C4' FAD . . . B 2 18.401 19.121 5.181 1 4.1 ? C4' FAD 271 A 1 HETATM 47 O O4' FAD . . . B 2 18.85 20.099 6.039 1 19.82 ? O4' FAD 271 A 1 HETATM 48 C C5' FAD . . . B 2 19.308 18.008 5.489 1 7.82 ? C5' FAD 271 A 1 HETATM 49 O O5' FAD . . . B 2 20.673 18.498 5.255 1 14.86 ? O5' FAD 271 A 1 HETATM 50 P P FAD . . . B 2 22.002 17.794 5.94 1 33.24 ? P FAD 271 A 1 HETATM 51 O O1P FAD . . . B 2 21.751 17.498 7.425 1 18.83 ? O1P FAD 271 A 1 HETATM 52 O O2P FAD . . . B 2 23.196 18.602 5.485 1 23.62 ? O2P FAD 271 A 1 HETATM 53 O O3P FAD . . . B 2 22.035 16.382 5.174 1 29.42 ? O3P FAD 271 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #