data_2CNM
#
_model_server_result.job_id            AtQRtwyQviUil9EA2VQ7jQ 
_model_server_result.datetime_utc      '2024-11-18 12:36:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2cnm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":0}' 
#
_entry.id    2CNM 
#
_exptl.entry_id    2CNM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              767.534 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME A' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2CNM 
_cell.length_a            133.127 
_cell.length_b            133.127 
_cell.length_c            190.986 
_cell.Z_PDB               54 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2CNM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 software_defined_assembly 1 
PQS dimeric 2 software_defined_assembly 2 
PQS dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,J,M 1 1 
B,E,H,K,N 2 1 
C,F,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 G S1P COA . D COA 0 1_555 D CH3 ACE 1 D ACE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
covale ? covale2 D C ACE 1 D ACE 1 1_555 D N ALA 2 D ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 H S1P COA . E COA 0 1_555 E CH3 ACE 1 E ACE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? 
covale ? covale4 E C ACE 1 E ACE 1 1_555 E N ALA 2 E ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale5 I S1P COA . F COA 0 1_555 F CH3 ACE 1 F ACE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? 
covale ? covale6 F C ACE 1 F ACE 1 1_555 F N ALA 2 F ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
#
_chem_comp.formula           'C21 H36 N7 O16 P3 S' 
_chem_comp.formula_weight    767.534 
_chem_comp.id                COA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2CNM 
_atom_sites.fract_transf_matrix[1][1]    0.007512 
_atom_sites.fract_transf_matrix[1][2]    0.004337 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005236 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 COA D 1 0 0 COA COA . 
H 3 COA E 1 0 0 COA COA . 
I 3 COA F 1 0 0 COA COA . 
J 4 HOH A 1 2001 2001 HOH HOH . 
J 4 HOH A 2 2002 2002 HOH HOH . 
J 4 HOH A 3 2003 2003 HOH HOH . 
J 4 HOH A 4 2004 2004 HOH HOH . 
J 4 HOH A 5 2005 2005 HOH HOH . 
J 4 HOH A 6 2006 2006 HOH HOH . 
J 4 HOH A 7 2007 2007 HOH HOH . 
J 4 HOH A 8 2008 2008 HOH HOH . 
J 4 HOH A 9 2009 2009 HOH HOH . 
J 4 HOH A 10 2010 2010 HOH HOH . 
J 4 HOH A 11 2011 2011 HOH HOH . 
J 4 HOH A 12 2012 2012 HOH HOH . 
J 4 HOH A 13 2013 2013 HOH HOH . 
J 4 HOH A 14 2014 2014 HOH HOH . 
J 4 HOH A 15 2015 2015 HOH HOH . 
J 4 HOH A 16 2016 2016 HOH HOH . 
J 4 HOH A 17 2017 2017 HOH HOH . 
J 4 HOH A 18 2018 2018 HOH HOH . 
J 4 HOH A 19 2019 2019 HOH HOH . 
K 4 HOH B 1 2001 2001 HOH HOH . 
K 4 HOH B 2 2002 2002 HOH HOH . 
K 4 HOH B 3 2003 2003 HOH HOH . 
K 4 HOH B 4 2004 2004 HOH HOH . 
K 4 HOH B 5 2005 2005 HOH HOH . 
K 4 HOH B 6 2006 2006 HOH HOH . 
K 4 HOH B 7 2007 2007 HOH HOH . 
K 4 HOH B 8 2008 2008 HOH HOH . 
K 4 HOH B 9 2009 2009 HOH HOH . 
K 4 HOH B 10 2010 2010 HOH HOH . 
K 4 HOH B 11 2011 2011 HOH HOH . 
K 4 HOH B 12 2012 2012 HOH HOH . 
K 4 HOH B 13 2013 2013 HOH HOH . 
K 4 HOH B 14 2014 2014 HOH HOH . 
K 4 HOH B 15 2015 2015 HOH HOH . 
K 4 HOH B 16 2016 2016 HOH HOH . 
K 4 HOH B 17 2017 2017 HOH HOH . 
K 4 HOH B 18 2018 2018 HOH HOH . 
K 4 HOH B 19 2019 2019 HOH HOH . 
K 4 HOH B 20 2020 2020 HOH HOH . 
K 4 HOH B 21 2021 2021 HOH HOH . 
K 4 HOH B 22 2022 2022 HOH HOH . 
K 4 HOH B 23 2023 2023 HOH HOH . 
L 4 HOH C 1 2001 2001 HOH HOH . 
L 4 HOH C 2 2002 2002 HOH HOH . 
L 4 HOH C 3 2003 2003 HOH HOH . 
L 4 HOH C 4 2004 2004 HOH HOH . 
L 4 HOH C 5 2005 2005 HOH HOH . 
L 4 HOH C 6 2006 2006 HOH HOH . 
L 4 HOH C 7 2007 2007 HOH HOH . 
L 4 HOH C 8 2008 2008 HOH HOH . 
L 4 HOH C 9 2009 2009 HOH HOH . 
L 4 HOH C 10 2010 2010 HOH HOH . 
L 4 HOH C 11 2011 2011 HOH HOH . 
L 4 HOH C 12 2012 2012 HOH HOH . 
L 4 HOH C 13 2013 2013 HOH HOH . 
L 4 HOH C 14 2014 2014 HOH HOH . 
L 4 HOH C 15 2015 2015 HOH HOH . 
M 4 HOH D 1 2001 2001 HOH HOH . 
N 4 HOH E 1 2001 2001 HOH HOH . 
N 4 HOH E 2 2002 2002 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A COA . . . G 3 -13.514 -23.882 50.632 1 62.75 ? N1A COA 0 D 1 
HETATM 2 C C2A COA . . . G 3 -12.235 -23.592 50.429 1 62.47 ? C2A COA 0 D 1 
HETATM 3 N N3A COA . . . G 3 -11.865 -23.114 49.256 1 62.88 ? N3A COA 0 D 1 
HETATM 4 C C4A COA . . . G 3 -12.753 -22.909 48.253 1 62.89 ? C4A COA 0 D 1 
HETATM 5 C C5A COA . . . G 3 -14.092 -23.2 48.431 1 62.54 ? C5A COA 0 D 1 
HETATM 6 C C6A COA . . . G 3 -14.454 -23.701 49.68 1 62.2 ? C6A COA 0 D 1 
HETATM 7 N N6A COA . . . G 3 -15.711 -24.007 49.946 1 62.36 ? N6A COA 0 D 1 
HETATM 8 N N7A COA . . . G 3 -14.729 -22.917 47.284 1 62.37 ? N7A COA 0 D 1 
HETATM 9 C C8A COA . . . G 3 -13.833 -22.451 46.408 1 62.28 ? C8A COA 0 D 1 
HETATM 10 N N9A COA . . . G 3 -12.626 -22.451 47.008 1 62.46 ? N9A COA 0 D 1 
HETATM 11 C C1B COA . . . G 3 -11.304 -22.035 46.415 1 61.39 ? C1B COA 0 D 1 
HETATM 12 C C2B COA . . . G 3 -11.241 -20.516 46.323 1 59.64 ? C2B COA 0 D 1 
HETATM 13 O O2B COA . . . G 3 -10.445 -20.101 45.195 1 58.53 ? O2B COA 0 D 1 
HETATM 14 C C3B COA . . . G 3 -10.572 -20.189 47.658 1 58.55 ? C3B COA 0 D 1 
HETATM 15 O O3B COA . . . G 3 -10.007 -18.878 47.613 1 59.68 ? O3B COA 0 D 1 
HETATM 16 P P3B COA . . . G 3 -11.018 -17.684 47.999 1 59.97 ? P3B COA 0 D 1 
HETATM 17 O O7A COA . . . G 3 -10.574 -16.531 46.95 1 59.72 ? O7A COA 0 D 1 
HETATM 18 O O8A COA . . . G 3 -10.56 -17.254 49.496 1 59.09 ? O8A COA 0 D 1 
HETATM 19 O O9A COA . . . G 3 -12.466 -18.048 47.92 1 59.37 ? O9A COA 0 D 1 
HETATM 20 C C4B COA . . . G 3 -9.523 -21.289 47.833 1 55.19 ? C4B COA 0 D 1 
HETATM 21 O O4B COA . . . G 3 -10.156 -22.469 47.267 1 57.73 ? O4B COA 0 D 1 
HETATM 22 C C5B COA . . . G 3 -9.317 -21.572 49.314 1 49.29 ? C5B COA 0 D 1 
HETATM 23 O O5B COA . . . G 3 -8.632 -20.524 49.95 1 42.15 ? O5B COA 0 D 1 
HETATM 24 P P1A COA . . . G 3 -7.868 -20.812 51.3 1 38.69 ? P1A COA 0 D 1 
HETATM 25 O O1A COA . . . G 3 -8.616 -20.312 52.481 1 40.97 ? O1A COA 0 D 1 
HETATM 26 O O2A COA . . . G 3 -6.451 -20.418 51.1 1 40.13 ? O2A COA 0 D 1 
HETATM 27 O O3A COA . . . G 3 -7.927 -22.377 51.367 1 36.63 ? O3A COA 0 D 1 
HETATM 28 P P2A COA . . . G 3 -7.807 -23.249 52.699 1 30.36 ? P2A COA 0 D 1 
HETATM 29 O O4A COA . . . G 3 -6.579 -22.988 53.469 1 32.25 ? O4A COA 0 D 1 
HETATM 30 O O5A COA . . . G 3 -9.08 -23.226 53.399 1 32.51 ? O5A COA 0 D 1 
HETATM 31 O O6A COA . . . G 3 -7.828 -24.614 51.947 1 29.67 ? O6A COA 0 D 1 
HETATM 32 C CBP COA . . . G 3 -6.981 -26.724 51.267 1 27.76 ? CBP COA 0 D 1 
HETATM 33 C CCP COA . . . G 3 -6.802 -25.199 51.226 1 27.24 ? CCP COA 0 D 1 
HETATM 34 C CDP COA . . . G 3 -7.884 -27.24 50.14 1 27.62 ? CDP COA 0 D 1 
HETATM 35 C CEP COA . . . G 3 -5.566 -27.258 51.103 1 28.43 ? CEP COA 0 D 1 
HETATM 36 C CAP COA . . . G 3 -7.63 -27.141 52.627 1 26.99 ? CAP COA 0 D 1 
HETATM 37 O OAP COA . . . G 3 -9.027 -26.797 52.656 1 25.86 ? OAP COA 0 D 1 
HETATM 38 C C9P COA . . . G 3 -7.505 -28.619 52.992 1 27.41 ? C9P COA 0 D 1 
HETATM 39 O O9P COA . . . G 3 -6.524 -29.01 53.62 1 27.98 ? O9P COA 0 D 1 
HETATM 40 N N8P COA . . . G 3 -8.532 -29.4 52.623 1 28.59 ? N8P COA 0 D 1 
HETATM 41 C C7P COA . . . G 3 -8.585 -30.844 52.893 1 28.09 ? C7P COA 0 D 1 
HETATM 42 C C6P COA . . . G 3 -7.328 -31.563 52.358 1 30.2 ? C6P COA 0 D 1 
HETATM 43 C C5P COA . . . G 3 -7.192 -31.368 50.845 1 30.89 ? C5P COA 0 D 1 
HETATM 44 O O5P COA . . . G 3 -8.176 -31.51 50.122 1 32.64 ? O5P COA 0 D 1 
HETATM 45 N N4P COA . . . G 3 -5.966 -31.034 50.43 1 31.22 ? N4P COA 0 D 1 
HETATM 46 C C3P COA . . . G 3 -5.578 -30.785 49.033 1 31.27 ? C3P COA 0 D 1 
HETATM 47 C C2P COA . . . G 3 -5.565 -32.115 48.287 1 32.54 ? C2P COA 0 D 1 
HETATM 48 S S1P COA . . . G 3 -5.091 -31.907 46.54 1 32.59 ? S1P COA 0 D 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           48 
#