data_2CT9 # _model_server_result.job_id YOP8rK1-glQxh72b8-3ImA _model_server_result.datetime_utc '2024-10-25 20:26:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ct9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 2CT9 # _exptl.entry_id 2CT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.69 _cell.angle_gamma 90 _cell.entry_id 2CT9 _cell.length_a 55.55 _cell.length_b 38.53 _cell.length_c 89.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA,PQS dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 123 A ASP 123 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc2 A OD2 ASP 125 A ASP 125 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc3 A OD2 ASP 127 A ASP 127 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc4 A O LYS 129 A LYS 129 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc5 A OE1 GLU 134 A GLU 134 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 A OE2 GLU 134 A GLU 134 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc7 A OD2 ASP 164 A ASP 164 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 A OD1 ASP 166 A ASP 166 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc9 A OD2 ASP 168 A ASP 168 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc10 A O ALA 170 A ALA 170 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc11 A OE1 GLU 175 A GLU 175 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc12 A OE2 GLU 175 A GLU 175 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc13 C CA CA . A CA 301 1_555 G O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc14 D CA CA . A CA 302 1_555 G O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc15 B OD1 ASP 123 B ASP 123 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc16 B OD2 ASP 125 B ASP 125 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc17 B OD2 ASP 127 B ASP 127 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc18 B O LYS 129 B LYS 129 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc19 B OE2 GLU 134 B GLU 134 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc20 B OE1 GLU 134 B GLU 134 1_555 E CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc21 B OD1 ASP 164 B ASP 164 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc22 B OD2 ASP 166 B ASP 166 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc23 B OD2 ASP 168 B ASP 168 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc24 B O ALA 170 B ALA 170 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc25 B OE1 GLU 175 B GLU 175 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc26 B OE2 GLU 175 B GLU 175 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc27 E CA CA . B CA 303 1_555 H O HOH . B HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc28 F CA CA . B CA 304 1_555 H O HOH . B HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2CT9 _atom_sites.fract_transf_matrix[1][1] 0.018003 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000217 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025957 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 301 301 CA CA . D 2 CA A 1 302 302 CA CA . E 2 CA B 1 303 303 CA CA . F 2 CA B 1 304 304 CA CA . G 3 HOH A 1 303 5 HOH HOH . G 3 HOH A 2 304 6 HOH HOH . G 3 HOH A 3 305 10 HOH HOH . G 3 HOH A 4 306 11 HOH HOH . G 3 HOH A 5 307 16 HOH HOH . G 3 HOH A 6 308 17 HOH HOH . G 3 HOH A 7 309 22 HOH HOH . G 3 HOH A 8 310 24 HOH HOH . G 3 HOH A 9 311 25 HOH HOH . G 3 HOH A 10 312 26 HOH HOH . G 3 HOH A 11 313 27 HOH HOH . G 3 HOH A 12 314 28 HOH HOH . G 3 HOH A 13 315 29 HOH HOH . G 3 HOH A 14 316 31 HOH HOH . G 3 HOH A 15 317 33 HOH HOH . G 3 HOH A 16 318 34 HOH HOH . G 3 HOH A 17 319 36 HOH HOH . G 3 HOH A 18 320 37 HOH HOH . G 3 HOH A 19 321 41 HOH HOH . G 3 HOH A 20 322 43 HOH HOH . G 3 HOH A 21 323 44 HOH HOH . G 3 HOH A 22 324 45 HOH HOH . G 3 HOH A 23 325 47 HOH HOH . G 3 HOH A 24 326 50 HOH HOH . G 3 HOH A 25 327 51 HOH HOH . G 3 HOH A 26 328 52 HOH HOH . G 3 HOH A 27 329 54 HOH HOH . G 3 HOH A 28 330 55 HOH HOH . G 3 HOH A 29 331 57 HOH HOH . G 3 HOH A 30 332 59 HOH HOH . G 3 HOH A 31 333 60 HOH HOH . G 3 HOH A 32 334 62 HOH HOH . G 3 HOH A 33 335 64 HOH HOH . G 3 HOH A 34 336 68 HOH HOH . G 3 HOH A 35 337 70 HOH HOH . G 3 HOH A 36 338 71 HOH HOH . G 3 HOH A 37 339 73 HOH HOH . G 3 HOH A 38 340 74 HOH HOH . G 3 HOH A 39 341 79 HOH HOH . G 3 HOH A 40 342 80 HOH HOH . G 3 HOH A 41 343 81 HOH HOH . G 3 HOH A 42 344 82 HOH HOH . G 3 HOH A 43 345 83 HOH HOH . G 3 HOH A 44 346 85 HOH HOH . G 3 HOH A 45 347 88 HOH HOH . G 3 HOH A 46 348 90 HOH HOH . G 3 HOH A 47 349 94 HOH HOH . G 3 HOH A 48 350 95 HOH HOH . G 3 HOH A 49 351 96 HOH HOH . G 3 HOH A 50 352 99 HOH HOH . G 3 HOH A 51 353 100 HOH HOH . G 3 HOH A 52 354 102 HOH HOH . G 3 HOH A 53 355 104 HOH HOH . G 3 HOH A 54 356 105 HOH HOH . G 3 HOH A 55 357 106 HOH HOH . G 3 HOH A 56 358 110 HOH HOH . G 3 HOH A 57 359 111 HOH HOH . G 3 HOH A 58 360 113 HOH HOH . G 3 HOH A 59 361 114 HOH HOH . G 3 HOH A 60 362 115 HOH HOH . G 3 HOH A 61 363 117 HOH HOH . G 3 HOH A 62 364 118 HOH HOH . G 3 HOH A 63 365 121 HOH HOH . G 3 HOH A 64 366 124 HOH HOH . G 3 HOH A 65 367 125 HOH HOH . G 3 HOH A 66 368 126 HOH HOH . G 3 HOH A 67 369 127 HOH HOH . G 3 HOH A 68 370 128 HOH HOH . G 3 HOH A 69 371 129 HOH HOH . G 3 HOH A 70 372 130 HOH HOH . G 3 HOH A 71 373 131 HOH HOH . G 3 HOH A 72 374 132 HOH HOH . G 3 HOH A 73 375 133 HOH HOH . G 3 HOH A 74 376 134 HOH HOH . G 3 HOH A 75 377 135 HOH HOH . G 3 HOH A 76 378 139 HOH HOH . H 3 HOH B 1 305 1 HOH HOH . H 3 HOH B 2 306 2 HOH HOH . H 3 HOH B 3 307 3 HOH HOH . H 3 HOH B 4 308 4 HOH HOH . H 3 HOH B 5 309 7 HOH HOH . H 3 HOH B 6 310 8 HOH HOH . H 3 HOH B 7 311 9 HOH HOH . H 3 HOH B 8 312 12 HOH HOH . H 3 HOH B 9 313 13 HOH HOH . H 3 HOH B 10 314 14 HOH HOH . H 3 HOH B 11 315 15 HOH HOH . H 3 HOH B 12 316 18 HOH HOH . H 3 HOH B 13 317 19 HOH HOH . H 3 HOH B 14 318 20 HOH HOH . H 3 HOH B 15 319 21 HOH HOH . H 3 HOH B 16 320 23 HOH HOH . H 3 HOH B 17 321 30 HOH HOH . H 3 HOH B 18 322 32 HOH HOH . H 3 HOH B 19 323 35 HOH HOH . H 3 HOH B 20 324 38 HOH HOH . H 3 HOH B 21 325 39 HOH HOH . H 3 HOH B 22 326 40 HOH HOH . H 3 HOH B 23 327 42 HOH HOH . H 3 HOH B 24 328 46 HOH HOH . H 3 HOH B 25 329 48 HOH HOH . H 3 HOH B 26 330 49 HOH HOH . H 3 HOH B 27 331 53 HOH HOH . H 3 HOH B 28 332 56 HOH HOH . H 3 HOH B 29 333 58 HOH HOH . H 3 HOH B 30 334 61 HOH HOH . H 3 HOH B 31 335 63 HOH HOH . H 3 HOH B 32 336 65 HOH HOH . H 3 HOH B 33 337 66 HOH HOH . H 3 HOH B 34 338 67 HOH HOH . H 3 HOH B 35 339 69 HOH HOH . H 3 HOH B 36 340 72 HOH HOH . H 3 HOH B 37 341 75 HOH HOH . H 3 HOH B 38 342 76 HOH HOH . H 3 HOH B 39 343 77 HOH HOH . H 3 HOH B 40 344 78 HOH HOH . H 3 HOH B 41 345 84 HOH HOH . H 3 HOH B 42 346 86 HOH HOH . H 3 HOH B 43 347 87 HOH HOH . H 3 HOH B 44 348 91 HOH HOH . H 3 HOH B 45 349 92 HOH HOH . H 3 HOH B 46 350 93 HOH HOH . H 3 HOH B 47 351 97 HOH HOH . H 3 HOH B 48 352 101 HOH HOH . H 3 HOH B 49 353 103 HOH HOH . H 3 HOH B 50 354 107 HOH HOH . H 3 HOH B 51 355 108 HOH HOH . H 3 HOH B 52 356 109 HOH HOH . H 3 HOH B 53 357 112 HOH HOH . H 3 HOH B 54 358 116 HOH HOH . H 3 HOH B 55 359 119 HOH HOH . H 3 HOH B 56 360 120 HOH HOH . H 3 HOH B 57 361 123 HOH HOH . H 3 HOH B 58 362 136 HOH HOH . H 3 HOH B 59 363 137 HOH HOH . H 3 HOH B 60 364 138 HOH HOH . H 3 HOH B 61 365 140 HOH HOH . H 3 HOH B 62 366 141 HOH HOH . H 3 HOH B 63 367 142 HOH HOH . H 3 HOH B 64 368 143 HOH HOH . H 3 HOH B 65 369 144 HOH HOH . H 3 HOH B 66 370 145 HOH HOH . H 3 HOH B 67 371 146 HOH HOH . H 3 HOH B 68 372 147 HOH HOH . H 3 HOH B 69 373 148 HOH HOH . H 3 HOH B 70 374 149 HOH HOH . H 3 HOH B 71 375 150 HOH HOH . H 3 HOH B 72 376 151 HOH HOH . H 3 HOH B 73 377 152 HOH HOH . H 3 HOH B 74 378 153 HOH HOH . H 3 HOH B 75 379 154 HOH HOH . H 3 HOH B 76 380 155 HOH HOH . H 3 HOH B 77 381 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 57.995 _atom_site.Cartn_y 4.429 _atom_site.Cartn_z 58.267 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #