data_2CTV # _model_server_result.job_id K73xtyjKv_5YXiDejKFoAA _model_server_result.datetime_utc '2024-12-01 12:54:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ctv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":238}' # _entry.id 2CTV # _exptl.entry_id 2CTV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CTV _cell.length_a 88.7 _cell.length_b 86.5 _cell.length_c 62.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CTV _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 88.7 86.5 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 88.7 0 0 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 86.5 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 8 A GLU 8 1_555 B MN MN . A MN 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc2 A OD2 ASP 10 A ASP 10 1_555 B MN MN . A MN 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc3 A OD1 ASP 10 A ASP 10 1_555 C CA CA . A CA 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 A OD2 ASP 10 A ASP 10 1_555 C CA CA . A CA 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc5 A O TYR 12 A TYR 12 1_555 C CA CA . A CA 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc6 A OD1 ASN 14 A ASN 14 1_555 C CA CA . A CA 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc7 A OD1 ASP 19 A ASP 19 1_555 B MN MN . A MN 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc8 A OD2 ASP 19 A ASP 19 1_555 C CA CA . A CA 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc9 A NE2 HIS 24 A HIS 24 1_555 B MN MN . A MN 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc10 B MN MN . A MN 238 1_555 D O HOH . A HOH 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc11 B MN MN . A MN 238 1_555 D O HOH . A HOH 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc12 C CA CA . A CA 239 1_555 D O HOH . A HOH 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc13 C CA CA . A CA 239 1_555 D O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2CTV _atom_sites.fract_transf_matrix[1][1] 0.011274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011561 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 238 238 MN MN . C 3 CA A 1 239 239 CA CA . D 4 HOH A 1 240 240 HOH HOH . D 4 HOH A 2 241 241 HOH HOH . D 4 HOH A 3 242 242 HOH HOH . D 4 HOH A 4 243 243 HOH HOH . D 4 HOH A 5 244 244 HOH HOH . D 4 HOH A 6 245 245 HOH HOH . D 4 HOH A 7 246 246 HOH HOH . D 4 HOH A 8 247 247 HOH HOH . D 4 HOH A 9 248 248 HOH HOH . D 4 HOH A 10 249 249 HOH HOH . D 4 HOH A 11 250 250 HOH HOH . D 4 HOH A 12 251 251 HOH HOH . D 4 HOH A 13 252 252 HOH HOH . D 4 HOH A 14 253 253 HOH HOH . D 4 HOH A 15 254 254 HOH HOH . D 4 HOH A 16 255 255 HOH HOH . D 4 HOH A 17 256 256 HOH HOH . D 4 HOH A 18 257 257 HOH HOH . D 4 HOH A 19 258 258 HOH HOH . D 4 HOH A 20 259 259 HOH HOH . D 4 HOH A 21 260 260 HOH HOH . D 4 HOH A 22 261 261 HOH HOH . D 4 HOH A 23 262 262 HOH HOH . D 4 HOH A 24 263 263 HOH HOH . D 4 HOH A 25 264 264 HOH HOH . D 4 HOH A 26 265 265 HOH HOH . D 4 HOH A 27 266 266 HOH HOH . D 4 HOH A 28 267 267 HOH HOH . D 4 HOH A 29 268 268 HOH HOH . D 4 HOH A 30 269 269 HOH HOH . D 4 HOH A 31 270 270 HOH HOH . D 4 HOH A 32 271 271 HOH HOH . D 4 HOH A 33 272 272 HOH HOH . D 4 HOH A 34 273 273 HOH HOH . D 4 HOH A 35 274 274 HOH HOH . D 4 HOH A 36 275 275 HOH HOH . D 4 HOH A 37 276 276 HOH HOH . D 4 HOH A 38 277 277 HOH HOH . D 4 HOH A 39 278 278 HOH HOH . D 4 HOH A 40 279 279 HOH HOH . D 4 HOH A 41 280 280 HOH HOH . D 4 HOH A 42 281 281 HOH HOH . D 4 HOH A 43 282 282 HOH HOH . D 4 HOH A 44 283 283 HOH HOH . D 4 HOH A 45 284 284 HOH HOH . D 4 HOH A 46 285 285 HOH HOH . D 4 HOH A 47 286 286 HOH HOH . D 4 HOH A 48 287 287 HOH HOH . D 4 HOH A 49 288 288 HOH HOH . D 4 HOH A 50 289 289 HOH HOH . D 4 HOH A 51 290 290 HOH HOH . D 4 HOH A 52 291 291 HOH HOH . D 4 HOH A 53 292 292 HOH HOH . D 4 HOH A 54 293 293 HOH HOH . D 4 HOH A 55 294 294 HOH HOH . D 4 HOH A 56 295 295 HOH HOH . D 4 HOH A 57 296 296 HOH HOH . D 4 HOH A 58 297 297 HOH HOH . D 4 HOH A 59 298 298 HOH HOH . D 4 HOH A 60 299 299 HOH HOH . D 4 HOH A 61 300 300 HOH HOH . D 4 HOH A 62 301 301 HOH HOH . D 4 HOH A 63 302 302 HOH HOH . D 4 HOH A 64 303 303 HOH HOH . D 4 HOH A 65 304 304 HOH HOH . D 4 HOH A 66 305 305 HOH HOH . D 4 HOH A 67 306 306 HOH HOH . D 4 HOH A 68 307 307 HOH HOH . D 4 HOH A 69 308 308 HOH HOH . D 4 HOH A 70 309 309 HOH HOH . D 4 HOH A 71 310 310 HOH HOH . D 4 HOH A 72 311 311 HOH HOH . D 4 HOH A 73 312 312 HOH HOH . D 4 HOH A 74 313 313 HOH HOH . D 4 HOH A 75 314 314 HOH HOH . D 4 HOH A 76 315 315 HOH HOH . D 4 HOH A 77 316 316 HOH HOH . D 4 HOH A 78 317 317 HOH HOH . D 4 HOH A 79 318 318 HOH HOH . D 4 HOH A 80 319 319 HOH HOH . D 4 HOH A 81 320 320 HOH HOH . D 4 HOH A 82 321 321 HOH HOH . D 4 HOH A 83 322 322 HOH HOH . D 4 HOH A 84 323 323 HOH HOH . D 4 HOH A 85 324 324 HOH HOH . D 4 HOH A 86 325 325 HOH HOH . D 4 HOH A 87 326 326 HOH HOH . D 4 HOH A 88 327 327 HOH HOH . D 4 HOH A 89 328 328 HOH HOH . D 4 HOH A 90 329 329 HOH HOH . D 4 HOH A 91 330 330 HOH HOH . D 4 HOH A 92 331 331 HOH HOH . D 4 HOH A 93 332 332 HOH HOH . D 4 HOH A 94 333 333 HOH HOH . D 4 HOH A 95 334 334 HOH HOH . D 4 HOH A 96 335 335 HOH HOH . D 4 HOH A 97 336 336 HOH HOH . D 4 HOH A 98 337 337 HOH HOH . D 4 HOH A 99 338 338 HOH HOH . D 4 HOH A 100 339 339 HOH HOH . D 4 HOH A 101 340 340 HOH HOH . D 4 HOH A 102 341 341 HOH HOH . D 4 HOH A 103 342 342 HOH HOH . D 4 HOH A 104 343 343 HOH HOH . D 4 HOH A 105 344 344 HOH HOH . D 4 HOH A 106 345 345 HOH HOH . D 4 HOH A 107 346 346 HOH HOH . D 4 HOH A 108 347 347 HOH HOH . D 4 HOH A 109 348 348 HOH HOH . D 4 HOH A 110 349 349 HOH HOH . D 4 HOH A 111 350 350 HOH HOH . D 4 HOH A 112 351 351 HOH HOH . D 4 HOH A 113 352 352 HOH HOH . D 4 HOH A 114 353 353 HOH HOH . D 4 HOH A 115 354 354 HOH HOH . D 4 HOH A 116 355 355 HOH HOH . D 4 HOH A 117 356 356 HOH HOH . D 4 HOH A 118 357 357 HOH HOH . D 4 HOH A 119 358 358 HOH HOH . D 4 HOH A 120 359 359 HOH HOH . D 4 HOH A 121 360 360 HOH HOH . D 4 HOH A 122 361 361 HOH HOH . D 4 HOH A 123 362 362 HOH HOH . D 4 HOH A 124 363 363 HOH HOH . D 4 HOH A 125 364 364 HOH HOH . D 4 HOH A 126 365 365 HOH HOH . D 4 HOH A 127 366 366 HOH HOH . D 4 HOH A 128 367 367 HOH HOH . D 4 HOH A 129 368 368 HOH HOH . D 4 HOH A 130 369 369 HOH HOH . D 4 HOH A 131 370 370 HOH HOH . D 4 HOH A 132 371 371 HOH HOH . D 4 HOH A 133 372 372 HOH HOH . D 4 HOH A 134 373 373 HOH HOH . D 4 HOH A 135 374 374 HOH HOH . D 4 HOH A 136 375 375 HOH HOH . D 4 HOH A 137 376 376 HOH HOH . D 4 HOH A 138 377 377 HOH HOH . D 4 HOH A 139 378 378 HOH HOH . D 4 HOH A 140 379 379 HOH HOH . D 4 HOH A 141 380 380 HOH HOH . D 4 HOH A 142 381 381 HOH HOH . D 4 HOH A 143 382 382 HOH HOH . D 4 HOH A 144 383 383 HOH HOH . D 4 HOH A 145 384 384 HOH HOH . D 4 HOH A 146 385 385 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 61.561 _atom_site.Cartn_y 18.357 _atom_site.Cartn_z 15.067 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 238 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #