data_2CVY # _model_server_result.job_id EMZdp2nJ3yTJQ2Tg2zrZ1g _model_server_result.datetime_utc '2024-12-04 00:57:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2cvy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2001}' # _entry.id 2CVY # _exptl.entry_id 2CVY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CVY _cell.length_a 108.062 _cell.length_b 117.59 _cell.length_c 64.216 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CVY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 117.59 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 218 A CYS 218 1_555 A SG CYS 443 A CYS 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 D O3B TTP . A TTP 1001 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc2 D O2A TTP . A TTP 1001 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc3 D O2B TTP . A TTP 1001 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2CVY _atom_sites.fract_transf_matrix[1][1] 0.009254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 2001 1 MG MG . D 4 TTP A 1 1001 1 TTP TTP . E 5 HOH A 1 2002 1 HOH HOH . E 5 HOH A 2 2003 2 HOH HOH . E 5 HOH A 3 2004 3 HOH HOH . E 5 HOH A 4 2005 4 HOH HOH . E 5 HOH A 5 2006 5 HOH HOH . E 5 HOH A 6 2007 6 HOH HOH . E 5 HOH A 7 2008 7 HOH HOH . E 5 HOH A 8 2009 8 HOH HOH . E 5 HOH A 9 2010 9 HOH HOH . E 5 HOH A 10 2011 10 HOH HOH . E 5 HOH A 11 2012 11 HOH HOH . E 5 HOH A 12 2013 12 HOH HOH . E 5 HOH A 13 2014 13 HOH HOH . E 5 HOH A 14 2015 14 HOH HOH . E 5 HOH A 15 2016 15 HOH HOH . E 5 HOH A 16 2017 16 HOH HOH . E 5 HOH A 17 2018 17 HOH HOH . E 5 HOH A 18 2019 18 HOH HOH . E 5 HOH A 19 2020 19 HOH HOH . E 5 HOH A 20 2021 20 HOH HOH . E 5 HOH A 21 2022 21 HOH HOH . E 5 HOH A 22 2023 22 HOH HOH . E 5 HOH A 23 2024 23 HOH HOH . E 5 HOH A 24 2025 24 HOH HOH . E 5 HOH A 25 2026 25 HOH HOH . E 5 HOH A 26 2027 26 HOH HOH . E 5 HOH A 27 2028 27 HOH HOH . E 5 HOH A 28 2029 28 HOH HOH . E 5 HOH A 29 2030 29 HOH HOH . E 5 HOH A 30 2031 30 HOH HOH . E 5 HOH A 31 2032 31 HOH HOH . E 5 HOH A 32 2033 32 HOH HOH . E 5 HOH A 33 2034 33 HOH HOH . E 5 HOH A 34 2035 34 HOH HOH . E 5 HOH A 35 2036 35 HOH HOH . E 5 HOH A 36 2037 36 HOH HOH . E 5 HOH A 37 2038 37 HOH HOH . E 5 HOH A 38 2039 38 HOH HOH . E 5 HOH A 39 2040 39 HOH HOH . E 5 HOH A 40 2041 40 HOH HOH . E 5 HOH A 41 2042 41 HOH HOH . E 5 HOH A 42 2043 42 HOH HOH . E 5 HOH A 43 2044 43 HOH HOH . E 5 HOH A 44 2045 44 HOH HOH . E 5 HOH A 45 2046 45 HOH HOH . E 5 HOH A 46 2047 46 HOH HOH . E 5 HOH A 47 2048 47 HOH HOH . E 5 HOH A 48 2049 48 HOH HOH . E 5 HOH A 49 2050 49 HOH HOH . E 5 HOH A 50 2051 50 HOH HOH . E 5 HOH A 51 2052 51 HOH HOH . E 5 HOH A 52 2053 52 HOH HOH . E 5 HOH A 53 2054 53 HOH HOH . E 5 HOH A 54 2055 54 HOH HOH . E 5 HOH A 55 2056 55 HOH HOH . E 5 HOH A 56 2057 56 HOH HOH . E 5 HOH A 57 2058 57 HOH HOH . E 5 HOH A 58 2059 58 HOH HOH . E 5 HOH A 59 2060 59 HOH HOH . E 5 HOH A 60 2061 60 HOH HOH . E 5 HOH A 61 2062 61 HOH HOH . E 5 HOH A 62 2063 62 HOH HOH . E 5 HOH A 63 2064 63 HOH HOH . E 5 HOH A 64 2065 64 HOH HOH . E 5 HOH A 65 2066 65 HOH HOH . E 5 HOH A 66 2067 66 HOH HOH . E 5 HOH A 67 2068 67 HOH HOH . E 5 HOH A 68 2069 68 HOH HOH . E 5 HOH A 69 2070 69 HOH HOH . E 5 HOH A 70 2071 70 HOH HOH . E 5 HOH A 71 2072 71 HOH HOH . E 5 HOH A 72 2073 72 HOH HOH . E 5 HOH A 73 2074 73 HOH HOH . E 5 HOH A 74 2075 74 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.593 _atom_site.Cartn_y 46.017 _atom_site.Cartn_z 27.712 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 522 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #