data_2CZG # _model_server_result.job_id 09AQyOWyr2O7lt5C7h12Mg _model_server_result.datetime_utc '2024-11-29 14:04:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2czg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":439}' # _entry.id 2CZG # _exptl.entry_id 2CZG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2CZG _cell.length_a 105.465 _cell.length_b 219.285 _cell.length_c 120.753 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CZG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 J O3 GOL . A GOL 441 1_555 S O3 GOL . B GOL 442 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? covale ? covale2 J O3 GOL . A GOL 441 3_555 S O3 GOL . B GOL 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2CZG _atom_sites.fract_transf_matrix[1][1] 0.009482 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 434 203 SO4 SO4 . D 2 SO4 A 1 435 204 SO4 SO4 . E 3 GOL A 1 436 302 GOL GOL . F 3 GOL A 1 437 303 GOL GOL . G 3 GOL A 1 438 305 GOL GOL . H 3 GOL A 1 439 307 GOL GOL . I 3 GOL A 1 440 310 GOL GOL . J 3 GOL A 1 441 311 GOL GOL . K 2 SO4 B 1 434 201 SO4 SO4 . L 2 SO4 B 1 435 202 SO4 SO4 . M 2 SO4 B 1 436 205 SO4 SO4 . N 2 SO4 B 1 437 206 SO4 SO4 . O 3 GOL B 1 438 301 GOL GOL . P 3 GOL B 1 439 304 GOL GOL . Q 3 GOL B 1 440 306 GOL GOL . R 3 GOL B 1 441 308 GOL GOL . S 3 GOL B 1 442 309 GOL GOL . T 4 HOH A 1 442 1 HOH HOH . T 4 HOH A 2 443 2 HOH HOH . T 4 HOH A 3 444 3 HOH HOH . T 4 HOH A 4 445 4 HOH HOH . T 4 HOH A 5 446 6 HOH HOH . T 4 HOH A 6 447 8 HOH HOH . T 4 HOH A 7 448 13 HOH HOH . T 4 HOH A 8 449 18 HOH HOH . T 4 HOH A 9 450 20 HOH HOH . T 4 HOH A 10 451 23 HOH HOH . T 4 HOH A 11 452 26 HOH HOH . T 4 HOH A 12 453 29 HOH HOH . T 4 HOH A 13 454 30 HOH HOH . T 4 HOH A 14 455 31 HOH HOH . T 4 HOH A 15 456 35 HOH HOH . T 4 HOH A 16 457 36 HOH HOH . T 4 HOH A 17 458 37 HOH HOH . T 4 HOH A 18 459 38 HOH HOH . T 4 HOH A 19 460 40 HOH HOH . T 4 HOH A 20 461 44 HOH HOH . T 4 HOH A 21 462 46 HOH HOH . T 4 HOH A 22 463 47 HOH HOH . T 4 HOH A 23 464 51 HOH HOH . T 4 HOH A 24 465 52 HOH HOH . T 4 HOH A 25 466 53 HOH HOH . T 4 HOH A 26 467 54 HOH HOH . T 4 HOH A 27 468 56 HOH HOH . T 4 HOH A 28 469 57 HOH HOH . T 4 HOH A 29 470 58 HOH HOH . T 4 HOH A 30 471 59 HOH HOH . T 4 HOH A 31 472 60 HOH HOH . T 4 HOH A 32 473 61 HOH HOH . T 4 HOH A 33 474 62 HOH HOH . T 4 HOH A 34 475 63 HOH HOH . T 4 HOH A 35 476 64 HOH HOH . T 4 HOH A 36 477 65 HOH HOH . T 4 HOH A 37 478 68 HOH HOH . T 4 HOH A 38 479 69 HOH HOH . T 4 HOH A 39 480 71 HOH HOH . T 4 HOH A 40 481 74 HOH HOH . T 4 HOH A 41 482 76 HOH HOH . T 4 HOH A 42 483 77 HOH HOH . T 4 HOH A 43 484 79 HOH HOH . T 4 HOH A 44 485 80 HOH HOH . T 4 HOH A 45 486 83 HOH HOH . T 4 HOH A 46 487 86 HOH HOH . T 4 HOH A 47 488 87 HOH HOH . T 4 HOH A 48 489 88 HOH HOH . T 4 HOH A 49 490 89 HOH HOH . T 4 HOH A 50 491 92 HOH HOH . T 4 HOH A 51 492 93 HOH HOH . T 4 HOH A 52 493 96 HOH HOH . T 4 HOH A 53 494 100 HOH HOH . T 4 HOH A 54 495 101 HOH HOH . T 4 HOH A 55 496 104 HOH HOH . T 4 HOH A 56 497 108 HOH HOH . T 4 HOH A 57 498 109 HOH HOH . T 4 HOH A 58 499 110 HOH HOH . T 4 HOH A 59 500 112 HOH HOH . T 4 HOH A 60 501 114 HOH HOH . T 4 HOH A 61 502 115 HOH HOH . T 4 HOH A 62 503 117 HOH HOH . T 4 HOH A 63 504 119 HOH HOH . T 4 HOH A 64 505 121 HOH HOH . T 4 HOH A 65 506 122 HOH HOH . T 4 HOH A 66 507 123 HOH HOH . T 4 HOH A 67 508 128 HOH HOH . T 4 HOH A 68 509 129 HOH HOH . T 4 HOH A 69 510 132 HOH HOH . T 4 HOH A 70 511 134 HOH HOH . T 4 HOH A 71 512 135 HOH HOH . T 4 HOH A 72 513 136 HOH HOH . T 4 HOH A 73 514 139 HOH HOH . T 4 HOH A 74 515 140 HOH HOH . T 4 HOH A 75 516 141 HOH HOH . T 4 HOH A 76 517 146 HOH HOH . T 4 HOH A 77 518 147 HOH HOH . T 4 HOH A 78 519 148 HOH HOH . T 4 HOH A 79 520 150 HOH HOH . T 4 HOH A 80 521 151 HOH HOH . T 4 HOH A 81 522 152 HOH HOH . T 4 HOH A 82 523 153 HOH HOH . T 4 HOH A 83 524 157 HOH HOH . T 4 HOH A 84 525 158 HOH HOH . T 4 HOH A 85 526 163 HOH HOH . T 4 HOH A 86 527 165 HOH HOH . T 4 HOH A 87 528 166 HOH HOH . T 4 HOH A 88 529 167 HOH HOH . T 4 HOH A 89 530 168 HOH HOH . T 4 HOH A 90 531 169 HOH HOH . T 4 HOH A 91 532 170 HOH HOH . T 4 HOH A 92 533 171 HOH HOH . T 4 HOH A 93 534 174 HOH HOH . T 4 HOH A 94 535 175 HOH HOH . T 4 HOH A 95 536 176 HOH HOH . T 4 HOH A 96 537 178 HOH HOH . T 4 HOH A 97 538 179 HOH HOH . T 4 HOH A 98 539 180 HOH HOH . T 4 HOH A 99 540 182 HOH HOH . T 4 HOH A 100 541 183 HOH HOH . T 4 HOH A 101 542 184 HOH HOH . T 4 HOH A 102 543 186 HOH HOH . T 4 HOH A 103 544 187 HOH HOH . T 4 HOH A 104 545 188 HOH HOH . U 4 HOH B 1 443 5 HOH HOH . U 4 HOH B 2 444 7 HOH HOH . U 4 HOH B 3 445 9 HOH HOH . U 4 HOH B 4 446 10 HOH HOH . U 4 HOH B 5 447 11 HOH HOH . U 4 HOH B 6 448 12 HOH HOH . U 4 HOH B 7 449 14 HOH HOH . U 4 HOH B 8 450 15 HOH HOH . U 4 HOH B 9 451 16 HOH HOH . U 4 HOH B 10 452 17 HOH HOH . U 4 HOH B 11 453 19 HOH HOH . U 4 HOH B 12 454 21 HOH HOH . U 4 HOH B 13 455 22 HOH HOH . U 4 HOH B 14 456 24 HOH HOH . U 4 HOH B 15 457 25 HOH HOH . U 4 HOH B 16 458 27 HOH HOH . U 4 HOH B 17 459 28 HOH HOH . U 4 HOH B 18 460 32 HOH HOH . U 4 HOH B 19 461 33 HOH HOH . U 4 HOH B 20 462 34 HOH HOH . U 4 HOH B 21 463 39 HOH HOH . U 4 HOH B 22 464 41 HOH HOH . U 4 HOH B 23 465 42 HOH HOH . U 4 HOH B 24 466 43 HOH HOH . U 4 HOH B 25 467 45 HOH HOH . U 4 HOH B 26 468 48 HOH HOH . U 4 HOH B 27 469 49 HOH HOH . U 4 HOH B 28 470 50 HOH HOH . U 4 HOH B 29 471 55 HOH HOH . U 4 HOH B 30 472 66 HOH HOH . U 4 HOH B 31 473 67 HOH HOH . U 4 HOH B 32 474 70 HOH HOH . U 4 HOH B 33 475 72 HOH HOH . U 4 HOH B 34 476 73 HOH HOH . U 4 HOH B 35 477 75 HOH HOH . U 4 HOH B 36 478 78 HOH HOH . U 4 HOH B 37 479 81 HOH HOH . U 4 HOH B 38 480 82 HOH HOH . U 4 HOH B 39 481 84 HOH HOH . U 4 HOH B 40 482 85 HOH HOH . U 4 HOH B 41 483 90 HOH HOH . U 4 HOH B 42 484 91 HOH HOH . U 4 HOH B 43 485 94 HOH HOH . U 4 HOH B 44 486 95 HOH HOH . U 4 HOH B 45 487 97 HOH HOH . U 4 HOH B 46 488 98 HOH HOH . U 4 HOH B 47 489 99 HOH HOH . U 4 HOH B 48 490 102 HOH HOH . U 4 HOH B 49 491 103 HOH HOH . U 4 HOH B 50 492 105 HOH HOH . U 4 HOH B 51 493 106 HOH HOH . U 4 HOH B 52 494 107 HOH HOH . U 4 HOH B 53 495 111 HOH HOH . U 4 HOH B 54 496 113 HOH HOH . U 4 HOH B 55 497 116 HOH HOH . U 4 HOH B 56 498 118 HOH HOH . U 4 HOH B 57 499 120 HOH HOH . U 4 HOH B 58 500 124 HOH HOH . U 4 HOH B 59 501 125 HOH HOH . U 4 HOH B 60 502 126 HOH HOH . U 4 HOH B 61 503 127 HOH HOH . U 4 HOH B 62 504 130 HOH HOH . U 4 HOH B 63 505 131 HOH HOH . U 4 HOH B 64 506 133 HOH HOH . U 4 HOH B 65 507 137 HOH HOH . U 4 HOH B 66 508 138 HOH HOH . U 4 HOH B 67 509 142 HOH HOH . U 4 HOH B 68 510 143 HOH HOH . U 4 HOH B 69 511 144 HOH HOH . U 4 HOH B 70 512 145 HOH HOH . U 4 HOH B 71 513 149 HOH HOH . U 4 HOH B 72 514 154 HOH HOH . U 4 HOH B 73 515 155 HOH HOH . U 4 HOH B 74 516 156 HOH HOH . U 4 HOH B 75 517 159 HOH HOH . U 4 HOH B 76 518 160 HOH HOH . U 4 HOH B 77 519 161 HOH HOH . U 4 HOH B 78 520 162 HOH HOH . U 4 HOH B 79 521 164 HOH HOH . U 4 HOH B 80 522 172 HOH HOH . U 4 HOH B 81 523 173 HOH HOH . U 4 HOH B 82 524 177 HOH HOH . U 4 HOH B 83 525 181 HOH HOH . U 4 HOH B 84 526 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . P 3 33.05 166.24 45.03 1 44.76 ? C1 GOL 439 B 1 HETATM 2 O O1 GOL . . . P 3 32.814 166.692 46.368 1 55.55 ? O1 GOL 439 B 1 HETATM 3 C C2 GOL . . . P 3 33.268 167.447 44.116 1 54.89 ? C2 GOL 439 B 1 HETATM 4 O O2 GOL . . . P 3 34.373 168.224 44.583 1 56.8 ? O2 GOL 439 B 1 HETATM 5 C C3 GOL . . . P 3 33.557 166.953 42.698 1 59.34 ? C3 GOL 439 B 1 HETATM 6 O O3 GOL . . . P 3 34.731 166.137 42.675 1 64.33 ? O3 GOL 439 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #