data_2CZR
#
_model_server_result.job_id            O_EI-4c3LlPvWYG3Nguz1w 
_model_server_result.datetime_utc      '2025-04-03 11:38:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2czr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1002}' 
#
_entry.id    2CZR 
#
_exptl.entry_id    2CZR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2CZR 
_cell.length_a            73.834 
_cell.length_b            73.834 
_cell.length_c            86.414 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2CZR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E 1 1 
A,B,C,D,E 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_464 y-1,x+1,-z-1 0 1 0 1 0 0 0 0 -1 -73.834 73.834 -86.414 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 157 A CYS 149 1_555 B ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc2 A SG CYS 160 A CYS 152 1_555 B ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc3 A NE2 HIS 172 A HIS 164 1_555 B ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc4 A NE2 HIS 176 A HIS 168 1_555 B ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2CZR 
_atom_sites.fract_transf_matrix[1][1]    0.013544 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013544 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011572 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 2001 2001 ZN ZN . 
C 3 GOL A 1 1001 1001 GOL GOL . 
D 3 GOL A 1 1002 1002 GOL GOL . 
E 4 HOH A 1 2002 1 HOH WAT . 
E 4 HOH A 2 2003 2 HOH WAT . 
E 4 HOH A 3 2004 3 HOH WAT . 
E 4 HOH A 4 2005 4 HOH WAT . 
E 4 HOH A 5 2006 5 HOH WAT . 
E 4 HOH A 6 2007 6 HOH WAT . 
E 4 HOH A 7 2008 7 HOH WAT . 
E 4 HOH A 8 2009 8 HOH WAT . 
E 4 HOH A 9 2010 9 HOH WAT . 
E 4 HOH A 10 2011 10 HOH WAT . 
E 4 HOH A 11 2012 11 HOH WAT . 
E 4 HOH A 12 2013 12 HOH WAT . 
E 4 HOH A 13 2014 13 HOH WAT . 
E 4 HOH A 14 2015 14 HOH WAT . 
E 4 HOH A 15 2016 15 HOH WAT . 
E 4 HOH A 16 2017 16 HOH WAT . 
E 4 HOH A 17 2018 17 HOH WAT . 
E 4 HOH A 18 2019 18 HOH WAT . 
E 4 HOH A 19 2020 19 HOH WAT . 
E 4 HOH A 20 2021 20 HOH WAT . 
E 4 HOH A 21 2022 21 HOH WAT . 
E 4 HOH A 22 2023 22 HOH WAT . 
E 4 HOH A 23 2024 23 HOH WAT . 
E 4 HOH A 24 2025 24 HOH WAT . 
E 4 HOH A 25 2026 25 HOH WAT . 
E 4 HOH A 26 2027 26 HOH WAT . 
E 4 HOH A 27 2028 27 HOH WAT . 
E 4 HOH A 28 2029 28 HOH WAT . 
E 4 HOH A 29 2030 29 HOH WAT . 
E 4 HOH A 30 2031 30 HOH WAT . 
E 4 HOH A 31 2032 31 HOH WAT . 
E 4 HOH A 32 2033 32 HOH WAT . 
E 4 HOH A 33 2034 33 HOH WAT . 
E 4 HOH A 34 2035 34 HOH WAT . 
E 4 HOH A 35 2036 35 HOH WAT . 
E 4 HOH A 36 2037 36 HOH WAT . 
E 4 HOH A 37 2038 37 HOH WAT . 
E 4 HOH A 38 2039 38 HOH WAT . 
E 4 HOH A 39 2040 39 HOH WAT . 
E 4 HOH A 40 2041 40 HOH WAT . 
E 4 HOH A 41 2042 41 HOH WAT . 
E 4 HOH A 42 2043 42 HOH WAT . 
E 4 HOH A 43 2044 43 HOH WAT . 
E 4 HOH A 44 2045 44 HOH WAT . 
E 4 HOH A 45 2046 45 HOH WAT . 
E 4 HOH A 46 2047 46 HOH WAT . 
E 4 HOH A 47 2048 47 HOH WAT . 
E 4 HOH A 48 2049 48 HOH WAT . 
E 4 HOH A 49 2050 49 HOH WAT . 
E 4 HOH A 50 2051 50 HOH WAT . 
E 4 HOH A 51 2052 51 HOH WAT . 
E 4 HOH A 52 2053 52 HOH WAT . 
E 4 HOH A 53 2054 53 HOH WAT . 
E 4 HOH A 54 2055 54 HOH WAT . 
E 4 HOH A 55 2056 55 HOH WAT . 
E 4 HOH A 56 2057 56 HOH WAT . 
E 4 HOH A 57 2058 57 HOH WAT . 
E 4 HOH A 58 2059 58 HOH WAT . 
E 4 HOH A 59 2060 59 HOH WAT . 
E 4 HOH A 60 2061 60 HOH WAT . 
E 4 HOH A 61 2062 61 HOH WAT . 
E 4 HOH A 62 2063 62 HOH WAT . 
E 4 HOH A 63 2064 63 HOH WAT . 
E 4 HOH A 64 2065 64 HOH WAT . 
E 4 HOH A 65 2066 65 HOH WAT . 
E 4 HOH A 66 2067 66 HOH WAT . 
E 4 HOH A 67 2068 67 HOH WAT . 
E 4 HOH A 68 2069 68 HOH WAT . 
E 4 HOH A 69 2070 69 HOH WAT . 
E 4 HOH A 70 2071 70 HOH WAT . 
E 4 HOH A 71 2072 71 HOH WAT . 
E 4 HOH A 72 2073 72 HOH WAT . 
E 4 HOH A 73 2074 73 HOH WAT . 
E 4 HOH A 74 2075 74 HOH WAT . 
E 4 HOH A 75 2076 75 HOH WAT . 
E 4 HOH A 76 2077 76 HOH WAT . 
E 4 HOH A 77 2078 77 HOH WAT . 
E 4 HOH A 78 2079 78 HOH WAT . 
E 4 HOH A 79 2080 79 HOH WAT . 
E 4 HOH A 80 2081 80 HOH WAT . 
E 4 HOH A 81 2082 81 HOH WAT . 
E 4 HOH A 82 2083 82 HOH WAT . 
E 4 HOH A 83 2084 83 HOH WAT . 
E 4 HOH A 84 2085 84 HOH WAT . 
E 4 HOH A 85 2086 85 HOH WAT . 
E 4 HOH A 86 2087 86 HOH WAT . 
E 4 HOH A 87 2088 87 HOH WAT . 
E 4 HOH A 88 2089 88 HOH WAT . 
E 4 HOH A 89 2090 89 HOH WAT . 
E 4 HOH A 90 2091 90 HOH WAT . 
E 4 HOH A 91 2092 91 HOH WAT . 
E 4 HOH A 92 2093 92 HOH WAT . 
E 4 HOH A 93 2094 93 HOH WAT . 
E 4 HOH A 94 2095 94 HOH WAT . 
E 4 HOH A 95 2096 95 HOH WAT . 
E 4 HOH A 96 2097 96 HOH WAT . 
E 4 HOH A 97 2098 97 HOH WAT . 
E 4 HOH A 98 2099 98 HOH WAT . 
E 4 HOH A 99 2100 99 HOH WAT . 
E 4 HOH A 100 2101 100 HOH WAT . 
E 4 HOH A 101 2102 101 HOH WAT . 
E 4 HOH A 102 2103 102 HOH WAT . 
E 4 HOH A 103 2104 103 HOH WAT . 
E 4 HOH A 104 2105 104 HOH WAT . 
E 4 HOH A 105 2106 105 HOH WAT . 
E 4 HOH A 106 2107 106 HOH WAT . 
E 4 HOH A 107 2108 107 HOH WAT . 
E 4 HOH A 108 2109 108 HOH WAT . 
E 4 HOH A 109 2110 109 HOH WAT . 
E 4 HOH A 110 2111 110 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -1.135 50.762 -39.898 1 66.01 ? C1 GOL 1002 A 1 
HETATM 2 O O1 GOL . . . D 3 -1.243 49.612 -40.757 1 64.61 ? O1 GOL 1002 A 1 
HETATM 3 C C2 GOL . . . D 3 -2.46 50.93 -39.119 1 66.54 ? C2 GOL 1002 A 1 
HETATM 4 O O2 GOL . . . D 3 -2.681 49.734 -38.348 1 66.28 ? O2 GOL 1002 A 1 
HETATM 5 C C3 GOL . . . D 3 -2.399 52.117 -38.237 1 66.15 ? C3 GOL 1002 A 1 
HETATM 6 O O3 GOL . . . D 3 -3.695 52.232 -37.516 1 65.71 ? O3 GOL 1002 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#