data_2D28
#
_model_server_result.job_id            tT3do2U9FP2uKofCgqOutw 
_model_server_result.datetime_utc      '2025-01-08 12:45:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2d28 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":200}' 
#
_entry.id    2D28 
#
_exptl.entry_id    2D28 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              136.989 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CACODYLATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2D28 
_cell.length_a            55.914 
_cell.length_b            55.914 
_cell.length_c            104.813 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2D28 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 1 C MSE 1 1_555 A N GLU 2 C GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C GLY 36 C GLY 36 1_555 A N MSE 37 C MSE 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 A C MSE 37 C MSE 37 1_555 A N GLY 38 C GLY 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale4 A C GLU 78 C GLU 78 1_555 A N MSE 79 C MSE 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C2 H6 As O2 -1' 
_chem_comp.formula_weight    136.989 
_chem_comp.id                CAC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CACODYLATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     dimethylarsinate 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
AS O1 CAC doub 54 n n 
AS O2 CAC sing 55 n n 
AS C1 CAC sing 56 n n 
AS C2 CAC sing 57 n n 
C1 H11 CAC sing 58 n n 
C1 H12 CAC sing 59 n n 
C1 H13 CAC sing 60 n n 
C2 H21 CAC sing 61 n n 
C2 H22 CAC sing 62 n n 
C2 H23 CAC sing 63 n n 
#
_atom_sites.entry_id                     2D28 
_atom_sites.fract_transf_matrix[1][1]    0.01788 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01788 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00954 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CAC C 1 200 200 CAC CAC . 
C 3 HOH C 1 201 9 HOH HOH . 
C 3 HOH C 2 202 46 HOH HOH . 
C 3 HOH C 3 203 47 HOH HOH . 
C 3 HOH C 4 204 48 HOH HOH . 
C 3 HOH C 5 205 49 HOH HOH . 
C 3 HOH C 6 206 50 HOH HOH . 
C 3 HOH C 7 207 51 HOH HOH . 
C 3 HOH C 8 208 52 HOH HOH . 
C 3 HOH C 9 209 53 HOH HOH . 
C 3 HOH C 10 210 54 HOH HOH . 
C 3 HOH C 11 211 63 HOH HOH . 
C 3 HOH C 12 212 64 HOH HOH . 
C 3 HOH C 13 213 65 HOH HOH . 
C 3 HOH C 14 214 70 HOH HOH . 
C 3 HOH C 15 215 71 HOH HOH . 
C 3 HOH C 16 216 72 HOH HOH . 
C 3 HOH C 17 217 73 HOH HOH . 
C 3 HOH C 18 218 74 HOH HOH . 
C 3 HOH C 19 219 76 HOH HOH . 
C 3 HOH C 20 220 84 HOH HOH . 
C 3 HOH C 21 221 86 HOH HOH . 
C 3 HOH C 22 222 88 HOH HOH . 
C 3 HOH C 23 223 91 HOH HOH . 
C 3 HOH C 24 224 93 HOH HOH . 
C 3 HOH C 25 225 95 HOH HOH . 
C 3 HOH C 26 226 100 HOH HOH . 
C 3 HOH C 27 227 101 HOH HOH . 
C 3 HOH C 28 228 108 HOH HOH . 
C 3 HOH C 29 229 110 HOH HOH . 
C 3 HOH C 30 230 113 HOH HOH . 
C 3 HOH C 31 231 114 HOH HOH . 
C 3 HOH C 32 232 119 HOH HOH . 
C 3 HOH C 33 233 120 HOH HOH . 
C 3 HOH C 34 234 121 HOH HOH . 
C 3 HOH C 35 235 122 HOH HOH . 
C 3 HOH C 36 236 123 HOH HOH . 
C 3 HOH C 37 237 126 HOH HOH . 
C 3 HOH C 38 238 130 HOH HOH . 
C 3 HOH C 39 239 131 HOH HOH . 
C 3 HOH C 40 240 137 HOH HOH . 
C 3 HOH C 41 241 138 HOH HOH . 
C 3 HOH C 42 242 140 HOH HOH . 
C 3 HOH C 43 243 141 HOH HOH . 
C 3 HOH C 44 244 143 HOH HOH . 
C 3 HOH C 45 245 146 HOH HOH . 
C 3 HOH C 46 246 151 HOH HOH . 
C 3 HOH C 47 247 161 HOH HOH . 
C 3 HOH C 48 248 168 HOH HOH . 
C 3 HOH C 49 249 170 HOH HOH . 
C 3 HOH C 50 250 174 HOH HOH . 
C 3 HOH C 51 251 175 HOH HOH . 
C 3 HOH C 52 252 179 HOH HOH . 
C 3 HOH C 53 253 180 HOH HOH . 
C 3 HOH C 54 254 184 HOH HOH . 
C 3 HOH C 55 255 186 HOH HOH . 
C 3 HOH C 56 256 188 HOH HOH . 
C 3 HOH C 57 257 189 HOH HOH . 
C 3 HOH C 58 258 191 HOH HOH . 
C 3 HOH C 59 259 193 HOH HOH . 
C 3 HOH C 60 260 195 HOH HOH . 
C 3 HOH C 61 261 197 HOH HOH . 
C 3 HOH C 62 262 205 HOH HOH . 
C 3 HOH C 63 263 208 HOH HOH . 
C 3 HOH C 64 264 211 HOH HOH . 
C 3 HOH C 65 265 212 HOH HOH . 
C 3 HOH C 66 266 219 HOH HOH . 
C 3 HOH C 67 267 220 HOH HOH . 
C 3 HOH C 68 268 222 HOH HOH . 
C 3 HOH C 69 269 224 HOH HOH . 
C 3 HOH C 70 270 225 HOH HOH . 
C 3 HOH C 71 271 226 HOH HOH . 
C 3 HOH C 72 272 230 HOH HOH . 
C 3 HOH C 73 273 233 HOH HOH . 
C 3 HOH C 74 274 235 HOH HOH . 
C 3 HOH C 75 275 237 HOH HOH . 
C 3 HOH C 76 276 241 HOH HOH . 
C 3 HOH C 77 277 245 HOH HOH . 
C 3 HOH C 78 278 247 HOH HOH . 
C 3 HOH C 79 279 250 HOH HOH . 
C 3 HOH C 80 280 254 HOH HOH . 
C 3 HOH C 81 281 267 HOH HOH . 
C 3 HOH C 82 282 268 HOH HOH . 
C 3 HOH C 83 283 275 HOH HOH . 
C 3 HOH C 84 284 280 HOH HOH . 
C 3 HOH C 85 285 286 HOH HOH . 
C 3 HOH C 86 286 291 HOH HOH . 
C 3 HOH C 87 287 298 HOH HOH . 
C 3 HOH C 88 288 305 HOH HOH . 
C 3 HOH C 89 289 316 HOH HOH . 
C 3 HOH C 90 290 328 HOH HOH . 
C 3 HOH C 91 291 333 HOH HOH . 
C 3 HOH C 92 292 334 HOH HOH . 
C 3 HOH C 93 293 342 HOH HOH . 
C 3 HOH C 94 294 343 HOH HOH . 
C 3 HOH C 95 295 344 HOH HOH . 
C 3 HOH C 96 296 350 HOH HOH . 
C 3 HOH C 97 297 352 HOH HOH . 
C 3 HOH C 98 298 354 HOH HOH . 
C 3 HOH C 99 299 360 HOH HOH . 
C 3 HOH C 100 300 364 HOH HOH . 
C 3 HOH C 101 301 365 HOH HOH . 
C 3 HOH C 102 302 379 HOH HOH . 
C 3 HOH C 103 303 380 HOH HOH . 
C 3 HOH C 104 304 383 HOH HOH . 
C 3 HOH C 105 305 384 HOH HOH . 
C 3 HOH C 106 306 386 HOH HOH . 
C 3 HOH C 107 307 392 HOH HOH . 
C 3 HOH C 108 308 395 HOH HOH . 
C 3 HOH C 109 309 398 HOH HOH . 
C 3 HOH C 110 310 410 HOH HOH . 
C 3 HOH C 111 311 413 HOH HOH . 
C 3 HOH C 112 312 414 HOH HOH . 
C 3 HOH C 113 313 505 HOH HOH . 
C 3 HOH C 114 314 506 HOH HOH . 
C 3 HOH C 115 315 509 HOH HOH . 
C 3 HOH C 116 316 513 HOH HOH . 
C 3 HOH C 117 317 518 HOH HOH . 
C 3 HOH C 118 318 521 HOH HOH . 
C 3 HOH C 119 319 601 HOH HOH . 
C 3 HOH C 120 320 606 HOH HOH . 
C 3 HOH C 121 321 608 HOH HOH . 
C 3 HOH C 122 322 613 HOH HOH . 
C 3 HOH C 123 323 616 HOH HOH . 
C 3 HOH C 124 324 620 HOH HOH . 
C 3 HOH C 125 325 622 HOH HOH . 
C 3 HOH C 126 326 625 HOH HOH . 
C 3 HOH C 127 327 631 HOH HOH . 
C 3 HOH C 128 328 638 HOH HOH . 
C 3 HOH C 129 329 647 HOH HOH . 
C 3 HOH C 130 330 648 HOH HOH . 
C 3 HOH C 131 331 655 HOH HOH . 
C 3 HOH C 132 332 658 HOH HOH . 
C 3 HOH C 133 333 664 HOH HOH . 
C 3 HOH C 134 334 672 HOH HOH . 
C 3 HOH C 135 335 673 HOH HOH . 
C 3 HOH C 136 336 678 HOH HOH . 
C 3 HOH C 137 337 683 HOH HOH . 
C 3 HOH C 138 338 688 HOH HOH . 
C 3 HOH C 139 339 690 HOH HOH . 
C 3 HOH C 140 340 694 HOH HOH . 
C 3 HOH C 141 341 696 HOH HOH . 
C 3 HOH C 142 342 702 HOH HOH . 
C 3 HOH C 143 343 706 HOH HOH . 
C 3 HOH C 144 344 707 HOH HOH . 
C 3 HOH C 145 345 710 HOH HOH . 
C 3 HOH C 146 346 722 HOH HOH . 
C 3 HOH C 147 347 728 HOH HOH . 
C 3 HOH C 148 348 729 HOH HOH . 
C 3 HOH C 149 349 732 HOH HOH . 
C 3 HOH C 150 350 750 HOH HOH . 
C 3 HOH C 151 351 751 HOH HOH . 
C 3 HOH C 152 352 753 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 AS AS CAC . . . B 2 19.134 -1.005 8.637 1 36.86 ? AS CAC 200 C 1 
HETATM 2 O O1 CAC . . . B 2 18.503 -2.613 8.039 1 42.53 ? O1 CAC 200 C 1 
HETATM 3 O O2 CAC . . . B 2 17.939 0.144 9.245 1 45.36 ? O2 CAC 200 C 1 
HETATM 4 C C1 CAC . . . B 2 20.013 -1.767 10.28 1 41.93 ? C1 CAC 200 C 1 
HETATM 5 C C2 CAC . . . B 2 20.183 -0.84 6.979 1 42.43 ? C2 CAC 200 C 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#