data_2D4K # _model_server_result.job_id 2w6bQqFpIq_A0jn9MweOoA _model_server_result.datetime_utc '2024-12-18 20:44:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2d4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":409}' # _entry.id 2D4K # _exptl.entry_id 2D4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.93 _cell.angle_gamma 90 _cell.entry_id 2D4K _cell.length_a 27.217 _cell.length_b 63.484 _cell.length_c 59.189 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2D4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf5 B SG CYS 6 N CYS 206 1_555 B SG CYS 127 N CYS 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 B SG CYS 30 N CYS 230 1_555 B SG CYS 115 N CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 B SG CYS 64 N CYS 264 1_555 B SG CYS 80 N CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf8 B SG CYS 76 N CYS 276 1_555 B SG CYS 94 N CYS 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc5 C NA NA . A NA 401 1_555 I O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc6 C NA NA . A NA 401 1_555 I O HOH . A HOH 403 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.601 ? metalc ? metalc7 B O SER 60 N SER 260 1_555 E NA NA . N NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc8 B O CYS 64 N CYS 264 1_555 E NA NA . N NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc9 B OG SER 72 N SER 272 1_555 E NA NA . N NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc10 B O ARG 73 N ARG 273 1_555 E NA NA . N NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc11 E NA NA . N NA 406 1_555 J O HOH . N HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc12 E NA NA . N NA 406 1_555 J O HOH . N HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2D4K _atom_sites.fract_transf_matrix[1][1] 0.036742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001881 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016917 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 401 401 NA NA . D 3 CL A 1 405 405 CL CL . E 2 NA N 1 406 406 NA NA . F 3 CL N 1 409 409 CL CL . G 3 CL N 1 410 410 CL CL . H 3 CL N 1 411 411 CL CL . I 4 HOH A 1 402 402 HOH HOH . I 4 HOH A 2 403 403 HOH HOH . I 4 HOH A 3 404 404 HOH HOH . I 4 HOH A 4 413 413 HOH HOH . I 4 HOH A 5 414 414 HOH HOH . I 4 HOH A 6 416 416 HOH HOH . I 4 HOH A 7 420 420 HOH HOH . I 4 HOH A 8 422 422 HOH HOH . I 4 HOH A 9 423 423 HOH HOH . I 4 HOH A 10 430 430 HOH HOH . I 4 HOH A 11 431 431 HOH HOH . I 4 HOH A 12 436 436 HOH HOH . I 4 HOH A 13 441 441 HOH HOH . I 4 HOH A 14 443 443 HOH HOH . I 4 HOH A 15 444 444 HOH HOH . I 4 HOH A 16 447 447 HOH HOH . I 4 HOH A 17 455 455 HOH HOH . I 4 HOH A 18 457 457 HOH HOH . I 4 HOH A 19 458 458 HOH HOH . I 4 HOH A 20 460 460 HOH HOH . I 4 HOH A 21 463 463 HOH HOH . I 4 HOH A 22 464 464 HOH HOH . I 4 HOH A 23 466 466 HOH HOH . I 4 HOH A 24 473 473 HOH HOH . I 4 HOH A 25 476 476 HOH HOH . I 4 HOH A 26 478 478 HOH HOH . I 4 HOH A 27 482 482 HOH HOH . I 4 HOH A 28 484 484 HOH HOH . I 4 HOH A 29 485 485 HOH HOH . I 4 HOH A 30 486 486 HOH HOH . I 4 HOH A 31 487 487 HOH HOH . I 4 HOH A 32 489 489 HOH HOH . I 4 HOH A 33 490 490 HOH HOH . I 4 HOH A 34 491 491 HOH HOH . I 4 HOH A 35 494 494 HOH HOH . I 4 HOH A 36 496 496 HOH HOH . I 4 HOH A 37 499 499 HOH HOH . I 4 HOH A 38 502 502 HOH HOH . I 4 HOH A 39 507 507 HOH HOH . I 4 HOH A 40 513 513 HOH HOH . I 4 HOH A 41 514 514 HOH HOH . I 4 HOH A 42 515 515 HOH HOH . I 4 HOH A 43 519 519 HOH HOH . I 4 HOH A 44 520 520 HOH HOH . I 4 HOH A 45 521 521 HOH HOH . I 4 HOH A 46 522 522 HOH HOH . I 4 HOH A 47 524 524 HOH HOH . I 4 HOH A 48 526 526 HOH HOH . I 4 HOH A 49 528 528 HOH HOH . I 4 HOH A 50 529 529 HOH HOH . I 4 HOH A 51 531 531 HOH HOH . I 4 HOH A 52 532 532 HOH HOH . I 4 HOH A 53 536 536 HOH HOH . I 4 HOH A 54 545 545 HOH HOH . I 4 HOH A 55 547 547 HOH HOH . I 4 HOH A 56 554 554 HOH HOH . I 4 HOH A 57 556 556 HOH HOH . I 4 HOH A 58 560 560 HOH HOH . I 4 HOH A 59 561 561 HOH HOH . I 4 HOH A 60 564 564 HOH HOH . I 4 HOH A 61 567 567 HOH HOH . I 4 HOH A 62 568 568 HOH HOH . I 4 HOH A 63 569 569 HOH HOH . I 4 HOH A 64 573 573 HOH HOH . I 4 HOH A 65 574 574 HOH HOH . I 4 HOH A 66 576 576 HOH HOH . I 4 HOH A 67 579 579 HOH HOH . I 4 HOH A 68 580 580 HOH HOH . I 4 HOH A 69 583 583 HOH HOH . I 4 HOH A 70 584 584 HOH HOH . I 4 HOH A 71 586 586 HOH HOH . I 4 HOH A 72 590 590 HOH HOH . I 4 HOH A 73 591 591 HOH HOH . I 4 HOH A 74 592 592 HOH HOH . I 4 HOH A 75 595 595 HOH HOH . I 4 HOH A 76 596 596 HOH HOH . I 4 HOH A 77 597 597 HOH HOH . I 4 HOH A 78 599 599 HOH HOH . I 4 HOH A 79 600 600 HOH HOH . I 4 HOH A 80 605 605 HOH HOH . I 4 HOH A 81 606 606 HOH HOH . I 4 HOH A 82 611 611 HOH HOH . I 4 HOH A 83 614 614 HOH HOH . I 4 HOH A 84 617 617 HOH HOH . I 4 HOH A 85 618 618 HOH HOH . I 4 HOH A 86 619 619 HOH HOH . I 4 HOH A 87 620 620 HOH HOH . I 4 HOH A 88 621 621 HOH HOH . I 4 HOH A 89 623 623 HOH HOH . I 4 HOH A 90 627 627 HOH HOH . I 4 HOH A 91 628 628 HOH HOH . I 4 HOH A 92 630 630 HOH HOH . I 4 HOH A 93 633 633 HOH HOH . I 4 HOH A 94 634 634 HOH HOH . I 4 HOH A 95 636 636 HOH HOH . I 4 HOH A 96 637 637 HOH HOH . I 4 HOH A 97 638 638 HOH HOH . I 4 HOH A 98 641 641 HOH HOH . I 4 HOH A 99 642 642 HOH HOH . I 4 HOH A 100 646 646 HOH HOH . I 4 HOH A 101 648 648 HOH HOH . I 4 HOH A 102 652 652 HOH HOH . I 4 HOH A 103 654 654 HOH HOH . J 4 HOH N 1 407 407 HOH HOH . J 4 HOH N 2 408 408 HOH HOH . J 4 HOH N 3 412 412 HOH HOH . J 4 HOH N 4 415 415 HOH HOH . J 4 HOH N 5 417 417 HOH HOH . J 4 HOH N 6 418 418 HOH HOH . J 4 HOH N 7 419 419 HOH HOH . J 4 HOH N 8 421 421 HOH HOH . J 4 HOH N 9 424 424 HOH HOH . J 4 HOH N 10 425 425 HOH HOH . J 4 HOH N 11 426 426 HOH HOH . J 4 HOH N 12 427 427 HOH HOH . J 4 HOH N 13 428 428 HOH HOH . J 4 HOH N 14 429 429 HOH HOH . J 4 HOH N 15 432 432 HOH HOH . J 4 HOH N 16 433 433 HOH HOH . J 4 HOH N 17 434 434 HOH HOH . J 4 HOH N 18 435 435 HOH HOH . J 4 HOH N 19 437 437 HOH HOH . J 4 HOH N 20 438 438 HOH HOH . J 4 HOH N 21 439 439 HOH HOH . J 4 HOH N 22 440 440 HOH HOH . J 4 HOH N 23 442 442 HOH HOH . J 4 HOH N 24 445 445 HOH HOH . J 4 HOH N 25 446 446 HOH HOH . J 4 HOH N 26 448 448 HOH HOH . J 4 HOH N 27 449 449 HOH HOH . J 4 HOH N 28 450 450 HOH HOH . J 4 HOH N 29 451 451 HOH HOH . J 4 HOH N 30 452 452 HOH HOH . J 4 HOH N 31 453 453 HOH HOH . J 4 HOH N 32 454 454 HOH HOH . J 4 HOH N 33 456 456 HOH HOH . J 4 HOH N 34 459 459 HOH HOH . J 4 HOH N 35 461 461 HOH HOH . J 4 HOH N 36 462 462 HOH HOH . J 4 HOH N 37 465 465 HOH HOH . J 4 HOH N 38 467 467 HOH HOH . J 4 HOH N 39 468 468 HOH HOH . J 4 HOH N 40 469 469 HOH HOH . J 4 HOH N 41 470 470 HOH HOH . J 4 HOH N 42 471 471 HOH HOH . J 4 HOH N 43 472 472 HOH HOH . J 4 HOH N 44 474 474 HOH HOH . J 4 HOH N 45 475 475 HOH HOH . J 4 HOH N 46 477 477 HOH HOH . J 4 HOH N 47 479 479 HOH HOH . J 4 HOH N 48 480 480 HOH HOH . J 4 HOH N 49 481 481 HOH HOH . J 4 HOH N 50 483 483 HOH HOH . J 4 HOH N 51 488 488 HOH HOH . J 4 HOH N 52 492 492 HOH HOH . J 4 HOH N 53 493 493 HOH HOH . J 4 HOH N 54 495 495 HOH HOH . J 4 HOH N 55 497 497 HOH HOH . J 4 HOH N 56 498 498 HOH HOH . J 4 HOH N 57 500 500 HOH HOH . J 4 HOH N 58 501 501 HOH HOH . J 4 HOH N 59 503 503 HOH HOH . J 4 HOH N 60 504 504 HOH HOH . J 4 HOH N 61 505 505 HOH HOH . J 4 HOH N 62 506 506 HOH HOH . J 4 HOH N 63 508 508 HOH HOH . J 4 HOH N 64 509 509 HOH HOH . J 4 HOH N 65 510 510 HOH HOH . J 4 HOH N 66 511 511 HOH HOH . J 4 HOH N 67 512 512 HOH HOH . J 4 HOH N 68 516 516 HOH HOH . J 4 HOH N 69 517 517 HOH HOH . J 4 HOH N 70 518 518 HOH HOH . J 4 HOH N 71 523 523 HOH HOH . J 4 HOH N 72 525 525 HOH HOH . J 4 HOH N 73 527 527 HOH HOH . J 4 HOH N 74 530 530 HOH HOH . J 4 HOH N 75 533 533 HOH HOH . J 4 HOH N 76 534 534 HOH HOH . J 4 HOH N 77 535 535 HOH HOH . J 4 HOH N 78 537 537 HOH HOH . J 4 HOH N 79 538 538 HOH HOH . J 4 HOH N 80 539 539 HOH HOH . J 4 HOH N 81 540 540 HOH HOH . J 4 HOH N 82 541 541 HOH HOH . J 4 HOH N 83 542 542 HOH HOH . J 4 HOH N 84 543 543 HOH HOH . J 4 HOH N 85 544 544 HOH HOH . J 4 HOH N 86 546 546 HOH HOH . J 4 HOH N 87 548 548 HOH HOH . J 4 HOH N 88 549 549 HOH HOH . J 4 HOH N 89 550 550 HOH HOH . J 4 HOH N 90 551 551 HOH HOH . J 4 HOH N 91 552 552 HOH HOH . J 4 HOH N 92 553 553 HOH HOH . J 4 HOH N 93 555 555 HOH HOH . J 4 HOH N 94 557 557 HOH HOH . J 4 HOH N 95 558 558 HOH HOH . J 4 HOH N 96 559 559 HOH HOH . J 4 HOH N 97 562 562 HOH HOH . J 4 HOH N 98 563 563 HOH HOH . J 4 HOH N 99 565 565 HOH HOH . J 4 HOH N 100 566 566 HOH HOH . J 4 HOH N 101 570 570 HOH HOH . J 4 HOH N 102 571 571 HOH HOH . J 4 HOH N 103 572 572 HOH HOH . J 4 HOH N 104 575 575 HOH HOH . J 4 HOH N 105 577 577 HOH HOH . J 4 HOH N 106 578 578 HOH HOH . J 4 HOH N 107 581 581 HOH HOH . J 4 HOH N 108 582 582 HOH HOH . J 4 HOH N 109 585 585 HOH HOH . J 4 HOH N 110 587 587 HOH HOH . J 4 HOH N 111 588 588 HOH HOH . J 4 HOH N 112 589 589 HOH HOH . J 4 HOH N 113 593 593 HOH HOH . J 4 HOH N 114 594 594 HOH HOH . J 4 HOH N 115 598 598 HOH HOH . J 4 HOH N 116 601 601 HOH HOH . J 4 HOH N 117 602 602 HOH HOH . J 4 HOH N 118 603 603 HOH HOH . J 4 HOH N 119 604 604 HOH HOH . J 4 HOH N 120 607 607 HOH HOH . J 4 HOH N 121 608 608 HOH HOH . J 4 HOH N 122 609 609 HOH HOH . J 4 HOH N 123 610 610 HOH HOH . J 4 HOH N 124 612 612 HOH HOH . J 4 HOH N 125 613 613 HOH HOH . J 4 HOH N 126 615 615 HOH HOH . J 4 HOH N 127 616 616 HOH HOH . J 4 HOH N 128 622 622 HOH HOH . J 4 HOH N 129 624 624 HOH HOH . J 4 HOH N 130 625 625 HOH HOH . J 4 HOH N 131 626 626 HOH HOH . J 4 HOH N 132 629 629 HOH HOH . J 4 HOH N 133 631 631 HOH HOH . J 4 HOH N 134 632 632 HOH HOH . J 4 HOH N 135 635 635 HOH HOH . J 4 HOH N 136 639 639 HOH HOH . J 4 HOH N 137 640 640 HOH HOH . J 4 HOH N 138 643 643 HOH HOH . J 4 HOH N 139 644 644 HOH HOH . J 4 HOH N 140 645 645 HOH HOH . J 4 HOH N 141 647 647 HOH HOH . J 4 HOH N 142 649 649 HOH HOH . J 4 HOH N 143 650 650 HOH HOH . J 4 HOH N 144 651 651 HOH HOH . J 4 HOH N 145 653 653 HOH HOH . J 4 HOH N 146 655 655 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.676 _atom_site.Cartn_y 33.839 _atom_site.Cartn_z 21.655 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 409 _atom_site.auth_asym_id N _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #