data_2D4Q # _model_server_result.job_id w8Kri4Kgtcn-xkgTI4z-4Q _model_server_result.datetime_utc '2024-11-20 03:46:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2d4q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 2D4Q # _exptl.entry_id 2D4Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 646.849 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description OXTOXYNOL-10 _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2D4Q _cell.length_a 113.5 _cell.length_b 113.5 _cell.length_c 125.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2D4Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C34 H62 O11' _chem_comp.formula_weight 646.849 _chem_comp.id OXN _chem_comp.mon_nstd_flag . _chem_comp.name OXTOXYNOL-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ALPHA-[4-(1,1,3,3-TETRAMETHYLBUTYL)PHENYL]-OMEGA-HYDROXYPOLY(OXY-1,2-ETHANEDIYL);TRITON X-100' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C1 OXN sing 237 n n C5 C6 OXN sing 238 n n C5 H51 OXN sing 239 n n C5 H52 OXN sing 240 n n C1 C3 OXN sing 241 n n C1 C4 OXN sing 242 n n C1 C2 OXN sing 243 n n C3 H31 OXN sing 244 n n C3 H32 OXN sing 245 n n C3 H33 OXN sing 246 n n C4 H41 OXN sing 247 n n C4 H42 OXN sing 248 n n C4 H43 OXN sing 249 n n C2 H21 OXN sing 250 n n C2 H22 OXN sing 251 n n C2 H23 OXN sing 252 n n C6 C9 OXN sing 253 n n C6 C8 OXN sing 254 n n C6 C7 OXN sing 255 n n C9 C10 OXN doub 256 n y C9 C14 OXN sing 257 n y C8 H81 OXN sing 258 n n C8 H82 OXN sing 259 n n C8 H83 OXN sing 260 n n C7 H71 OXN sing 261 n n C7 H72 OXN sing 262 n n C7 H73 OXN sing 263 n n C10 C11 OXN sing 264 n y C10 H10 OXN sing 265 n n C11 C12 OXN doub 266 n y C11 H11 OXN sing 267 n n C12 C13 OXN sing 268 n y C12 O15 OXN sing 269 n n C13 C14 OXN doub 270 n y C13 H13 OXN sing 271 n n C14 H14 OXN sing 272 n n O15 C16 OXN sing 273 n n C16 C17 OXN sing 274 n n C16 H161 OXN sing 275 n n C16 H162 OXN sing 276 n n C17 O18 OXN sing 277 n n C17 H171 OXN sing 278 n n C17 H172 OXN sing 279 n n O18 C19 OXN sing 280 n n C19 C20 OXN sing 281 n n C19 H191 OXN sing 282 n n C19 H192 OXN sing 283 n n C20 O21 OXN sing 284 n n C20 H201 OXN sing 285 n n C20 H202 OXN sing 286 n n O21 C22 OXN sing 287 n n C22 C23 OXN sing 288 n n C22 H221 OXN sing 289 n n C22 H222 OXN sing 290 n n C23 O24 OXN sing 291 n n C23 H231 OXN sing 292 n n C23 H232 OXN sing 293 n n O24 C25 OXN sing 294 n n C25 C26 OXN sing 295 n n C25 H251 OXN sing 296 n n C25 H252 OXN sing 297 n n C26 O27 OXN sing 298 n n C26 H261 OXN sing 299 n n C26 H262 OXN sing 300 n n O27 C28 OXN sing 301 n n C28 C29 OXN sing 302 n n C28 H281 OXN sing 303 n n C28 H282 OXN sing 304 n n C29 O30 OXN sing 305 n n C29 H291 OXN sing 306 n n C29 H292 OXN sing 307 n n O30 C31 OXN sing 308 n n C31 C32 OXN sing 309 n n C31 H311 OXN sing 310 n n C31 H312 OXN sing 311 n n C32 O33 OXN sing 312 n n C32 H321 OXN sing 313 n n C32 H322 OXN sing 314 n n O33 C34 OXN sing 315 n n C34 C35 OXN sing 316 n n C34 H341 OXN sing 317 n n C34 H342 OXN sing 318 n n C35 O36 OXN sing 319 n n C35 H351 OXN sing 320 n n C35 H352 OXN sing 321 n n O36 C37 OXN sing 322 n n C37 C38 OXN sing 323 n n C37 H371 OXN sing 324 n n C37 H372 OXN sing 325 n n C38 O39 OXN sing 326 n n C38 H381 OXN sing 327 n n C38 H382 OXN sing 328 n n O39 C40 OXN sing 329 n n C40 C41 OXN sing 330 n n C40 H401 OXN sing 331 n n C40 H402 OXN sing 332 n n C41 O42 OXN sing 333 n n C41 H411 OXN sing 334 n n C41 H412 OXN sing 335 n n O42 C43 OXN sing 336 n n C43 C44 OXN sing 337 n n C43 H431 OXN sing 338 n n C43 H432 OXN sing 339 n n C44 O45 OXN sing 340 n n C44 H441 OXN sing 341 n n C44 H442 OXN sing 342 n n O45 H45 OXN sing 343 n n # _atom_sites.entry_id 2D4Q _atom_sites.fract_transf_matrix[1][1] 0.008811 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OXN A 1 701 701 OXN OXN . D 2 OXN B 1 702 702 OXN OXN . E 3 POP B 1 601 601 POP POP . F 3 POP B 1 602 602 POP POP . G 4 HOH A 1 6 6 HOH HOH . G 4 HOH A 2 7 7 HOH HOH . G 4 HOH A 3 9 9 HOH HOH . G 4 HOH A 4 14 14 HOH HOH . G 4 HOH A 5 15 15 HOH HOH . G 4 HOH A 6 18 18 HOH HOH . G 4 HOH A 7 19 19 HOH HOH . G 4 HOH A 8 20 20 HOH HOH . G 4 HOH A 9 23 23 HOH HOH . G 4 HOH A 10 25 25 HOH HOH . G 4 HOH A 11 27 27 HOH HOH . G 4 HOH A 12 28 28 HOH HOH . G 4 HOH A 13 29 29 HOH HOH . G 4 HOH A 14 30 30 HOH HOH . G 4 HOH A 15 31 31 HOH HOH . G 4 HOH A 16 36 36 HOH HOH . G 4 HOH A 17 37 37 HOH HOH . G 4 HOH A 18 39 39 HOH HOH . G 4 HOH A 19 40 40 HOH HOH . G 4 HOH A 20 41 41 HOH HOH . G 4 HOH A 21 43 43 HOH HOH . G 4 HOH A 22 47 47 HOH HOH . G 4 HOH A 23 48 48 HOH HOH . G 4 HOH A 24 49 49 HOH HOH . G 4 HOH A 25 50 50 HOH HOH . G 4 HOH A 26 51 51 HOH HOH . G 4 HOH A 27 53 53 HOH HOH . G 4 HOH A 28 57 57 HOH HOH . G 4 HOH A 29 58 58 HOH HOH . G 4 HOH A 30 59 59 HOH HOH . G 4 HOH A 31 60 60 HOH HOH . G 4 HOH A 32 61 61 HOH HOH . G 4 HOH A 33 62 62 HOH HOH . G 4 HOH A 34 64 64 HOH HOH . G 4 HOH A 35 65 65 HOH HOH . G 4 HOH A 36 66 66 HOH HOH . G 4 HOH A 37 69 69 HOH HOH . G 4 HOH A 38 71 71 HOH HOH . G 4 HOH A 39 72 72 HOH HOH . G 4 HOH A 40 73 73 HOH HOH . G 4 HOH A 41 75 75 HOH HOH . G 4 HOH A 42 77 77 HOH HOH . G 4 HOH A 43 78 78 HOH HOH . G 4 HOH A 44 79 79 HOH HOH . G 4 HOH A 45 80 80 HOH HOH . G 4 HOH A 46 81 81 HOH HOH . G 4 HOH A 47 85 85 HOH HOH . G 4 HOH A 48 86 86 HOH HOH . G 4 HOH A 49 89 89 HOH HOH . G 4 HOH A 50 92 92 HOH HOH . G 4 HOH A 51 96 96 HOH HOH . G 4 HOH A 52 98 98 HOH HOH . G 4 HOH A 53 102 102 HOH HOH . G 4 HOH A 54 107 107 HOH HOH . G 4 HOH A 55 110 110 HOH HOH . G 4 HOH A 56 111 111 HOH HOH . G 4 HOH A 57 112 112 HOH HOH . G 4 HOH A 58 113 113 HOH HOH . H 4 HOH B 1 1 1 HOH HOH . H 4 HOH B 2 2 2 HOH HOH . H 4 HOH B 3 3 3 HOH HOH . H 4 HOH B 4 4 4 HOH HOH . H 4 HOH B 5 5 5 HOH HOH . H 4 HOH B 6 8 8 HOH HOH . H 4 HOH B 7 10 10 HOH HOH . H 4 HOH B 8 11 11 HOH HOH . H 4 HOH B 9 12 12 HOH HOH . H 4 HOH B 10 13 13 HOH HOH . H 4 HOH B 11 16 16 HOH HOH . H 4 HOH B 12 17 17 HOH HOH . H 4 HOH B 13 21 21 HOH HOH . H 4 HOH B 14 22 22 HOH HOH . H 4 HOH B 15 24 24 HOH HOH . H 4 HOH B 16 26 26 HOH HOH . H 4 HOH B 17 32 32 HOH HOH . H 4 HOH B 18 33 33 HOH HOH . H 4 HOH B 19 34 34 HOH HOH . H 4 HOH B 20 35 35 HOH HOH . H 4 HOH B 21 38 38 HOH HOH . H 4 HOH B 22 42 42 HOH HOH . H 4 HOH B 23 44 44 HOH HOH . H 4 HOH B 24 45 45 HOH HOH . H 4 HOH B 25 46 46 HOH HOH . H 4 HOH B 26 52 52 HOH HOH . H 4 HOH B 27 54 54 HOH HOH . H 4 HOH B 28 55 55 HOH HOH . H 4 HOH B 29 56 56 HOH HOH . H 4 HOH B 30 63 63 HOH HOH . H 4 HOH B 31 67 67 HOH HOH . H 4 HOH B 32 68 68 HOH HOH . H 4 HOH B 33 70 70 HOH HOH . H 4 HOH B 34 74 74 HOH HOH . H 4 HOH B 35 76 76 HOH HOH . H 4 HOH B 36 82 82 HOH HOH . H 4 HOH B 37 83 83 HOH HOH . H 4 HOH B 38 84 84 HOH HOH . H 4 HOH B 39 87 87 HOH HOH . H 4 HOH B 40 88 88 HOH HOH . H 4 HOH B 41 90 90 HOH HOH . H 4 HOH B 42 91 91 HOH HOH . H 4 HOH B 43 93 93 HOH HOH . H 4 HOH B 44 94 94 HOH HOH . H 4 HOH B 45 95 95 HOH HOH . H 4 HOH B 46 97 97 HOH HOH . H 4 HOH B 47 99 99 HOH HOH . H 4 HOH B 48 100 100 HOH HOH . H 4 HOH B 49 101 101 HOH HOH . H 4 HOH B 50 103 103 HOH HOH . H 4 HOH B 51 104 104 HOH HOH . H 4 HOH B 52 105 105 HOH HOH . H 4 HOH B 53 106 106 HOH HOH . H 4 HOH B 54 108 108 HOH HOH . H 4 HOH B 55 109 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 OXN . . . D 2 -28.169 -9.679 -29.866 1 58.63 ? C5 OXN 702 B 1 HETATM 2 C C1 OXN . . . D 2 -28.206 -8.898 -28.41 1 56.73 ? C1 OXN 702 B 1 HETATM 3 C C4 OXN . . . D 2 -28.125 -7.387 -28.366 1 52.64 ? C4 OXN 702 B 1 HETATM 4 C C2 OXN . . . D 2 -29.444 -9.123 -27.543 1 37.32 ? C2 OXN 702 B 1 HETATM 5 C C6 OXN . . . D 2 -27.303 -9.396 -31.124 1 59.61 ? C6 OXN 702 B 1 HETATM 6 C C9 OXN . . . D 2 -27.794 -8.149 -31.964 1 63.24 ? C9 OXN 702 B 1 HETATM 7 C C8 OXN . . . D 2 -25.855 -9.267 -30.601 1 58.32 ? C8 OXN 702 B 1 HETATM 8 C C7 OXN . . . D 2 -27.39 -10.584 -32.169 1 50.78 ? C7 OXN 702 B 1 HETATM 9 C C10 OXN . . . D 2 -29.046 -8.158 -32.707 1 69.36 ? C10 OXN 702 B 1 HETATM 10 C C11 OXN . . . D 2 -29.483 -7.016 -33.437 1 74.17 ? C11 OXN 702 B 1 HETATM 11 C C12 OXN . . . D 2 -28.721 -5.836 -33.463 1 69.42 ? C12 OXN 702 B 1 HETATM 12 C C13 OXN . . . D 2 -27.51 -5.805 -32.759 1 71.52 ? C13 OXN 702 B 1 HETATM 13 C C14 OXN . . . D 2 -27.046 -6.924 -32.021 1 62.77 ? C14 OXN 702 B 1 HETATM 14 O O15 OXN . . . D 2 -29.153 -4.734 -34.158 1 73.38 ? O15 OXN 702 B 1 HETATM 15 C C16 OXN . . . D 2 -28.6 -3.731 -35.042 1 56.64 ? C16 OXN 702 B 1 HETATM 16 C C17 OXN . . . D 2 -29.859 -3.123 -35.753 1 51.25 ? C17 OXN 702 B 1 HETATM 17 O O18 OXN . . . D 2 -29.698 -2.805 -37.178 1 67.45 ? O18 OXN 702 B 1 HETATM 18 C C19 OXN . . . D 2 -30.909 -3.144 -37.984 1 66.31 ? C19 OXN 702 B 1 HETATM 19 C C20 OXN . . . D 2 -30.562 -3.557 -39.459 1 68.15 ? C20 OXN 702 B 1 HETATM 20 O O21 OXN . . . D 2 -30.658 -5.011 -39.793 1 79.81 ? O21 OXN 702 B 1 HETATM 21 C C22 OXN . . . D 2 -29.568 -5.84 -40.403 1 83.15 ? C22 OXN 702 B 1 HETATM 22 C C23 OXN . . . D 2 -28.404 -6.565 -39.526 1 86.31 ? C23 OXN 702 B 1 HETATM 23 O O24 OXN . . . D 2 -28.312 -6.467 -38.012 1 86.82 ? O24 OXN 702 B 1 HETATM 24 C C25 OXN . . . D 2 -27.416 -7.26 -37.16 1 71.91 ? C25 OXN 702 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #