data_2D54 # _model_server_result.job_id 3LBfoAAJvRIhFM1fybGXGw _model_server_result.datetime_utc '2025-03-05 01:48:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2d54 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 2D54 # _exptl.entry_id 2D54 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2D54 _cell.length_a 50.318 _cell.length_b 82.209 _cell.length_c 120.56 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2D54 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 127 A CYS 127 1_555 B ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc2 A SG CYS 130 A CYS 130 1_555 B ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc3 A SG CYS 144 A CYS 144 1_555 B ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc4 A ND1 HIS 147 A HIS 147 1_555 B ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2D54 _atom_sites.fract_transf_matrix[1][1] 0.019874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1501 501 ZN ZN2 . C 3 HOH A 1 601 601 HOH TIP . C 3 HOH A 2 602 602 HOH TIP . C 3 HOH A 3 603 603 HOH TIP . C 3 HOH A 4 604 604 HOH TIP . C 3 HOH A 5 605 605 HOH TIP . C 3 HOH A 6 606 606 HOH TIP . C 3 HOH A 7 607 607 HOH TIP . C 3 HOH A 8 608 608 HOH TIP . C 3 HOH A 9 609 609 HOH TIP . C 3 HOH A 10 610 610 HOH TIP . C 3 HOH A 11 611 611 HOH TIP . C 3 HOH A 12 612 612 HOH TIP . C 3 HOH A 13 613 613 HOH TIP . C 3 HOH A 14 614 614 HOH TIP . C 3 HOH A 15 615 615 HOH TIP . C 3 HOH A 16 616 616 HOH TIP . C 3 HOH A 17 617 617 HOH TIP . C 3 HOH A 18 618 618 HOH TIP . C 3 HOH A 19 619 619 HOH TIP . C 3 HOH A 20 620 620 HOH TIP . C 3 HOH A 21 621 621 HOH TIP . C 3 HOH A 22 622 622 HOH TIP . C 3 HOH A 23 623 623 HOH TIP . C 3 HOH A 24 624 624 HOH TIP . C 3 HOH A 25 625 625 HOH TIP . C 3 HOH A 26 626 626 HOH TIP . C 3 HOH A 27 627 627 HOH TIP . C 3 HOH A 28 628 628 HOH TIP . C 3 HOH A 29 629 629 HOH TIP . C 3 HOH A 30 630 630 HOH TIP . C 3 HOH A 31 631 631 HOH TIP . C 3 HOH A 32 632 632 HOH TIP . C 3 HOH A 33 633 633 HOH TIP . C 3 HOH A 34 634 634 HOH TIP . C 3 HOH A 35 635 635 HOH TIP . C 3 HOH A 36 636 636 HOH TIP . C 3 HOH A 37 637 637 HOH TIP . C 3 HOH A 38 638 638 HOH TIP . C 3 HOH A 39 639 639 HOH TIP . C 3 HOH A 40 640 640 HOH TIP . C 3 HOH A 41 641 641 HOH TIP . C 3 HOH A 42 642 642 HOH TIP . C 3 HOH A 43 643 643 HOH TIP . C 3 HOH A 44 644 644 HOH TIP . C 3 HOH A 45 645 645 HOH TIP . C 3 HOH A 46 646 646 HOH TIP . C 3 HOH A 47 647 647 HOH TIP . C 3 HOH A 48 648 648 HOH TIP . C 3 HOH A 49 649 649 HOH TIP . C 3 HOH A 50 650 650 HOH TIP . C 3 HOH A 51 651 651 HOH TIP . C 3 HOH A 52 652 652 HOH TIP . C 3 HOH A 53 653 653 HOH TIP . C 3 HOH A 54 654 654 HOH TIP . C 3 HOH A 55 655 655 HOH TIP . C 3 HOH A 56 656 656 HOH TIP . C 3 HOH A 57 657 657 HOH TIP . C 3 HOH A 58 658 658 HOH TIP . C 3 HOH A 59 659 659 HOH TIP . C 3 HOH A 60 660 660 HOH TIP . C 3 HOH A 61 661 661 HOH TIP . C 3 HOH A 62 662 662 HOH TIP . C 3 HOH A 63 663 663 HOH TIP . C 3 HOH A 64 664 664 HOH TIP . C 3 HOH A 65 665 665 HOH TIP . C 3 HOH A 66 666 666 HOH TIP . C 3 HOH A 67 667 667 HOH TIP . C 3 HOH A 68 668 668 HOH TIP . C 3 HOH A 69 669 669 HOH TIP . C 3 HOH A 70 670 670 HOH TIP . C 3 HOH A 71 671 671 HOH TIP . C 3 HOH A 72 672 672 HOH TIP . C 3 HOH A 73 673 673 HOH TIP . C 3 HOH A 74 674 674 HOH TIP . C 3 HOH A 75 675 675 HOH TIP . C 3 HOH A 76 676 676 HOH TIP . C 3 HOH A 77 677 677 HOH TIP . C 3 HOH A 78 678 678 HOH TIP . C 3 HOH A 79 679 679 HOH TIP . C 3 HOH A 80 680 680 HOH TIP . C 3 HOH A 81 681 681 HOH TIP . C 3 HOH A 82 682 682 HOH TIP . C 3 HOH A 83 683 683 HOH TIP . C 3 HOH A 84 684 684 HOH TIP . C 3 HOH A 85 685 685 HOH TIP . C 3 HOH A 86 686 686 HOH TIP . C 3 HOH A 87 687 687 HOH TIP . C 3 HOH A 88 688 688 HOH TIP . C 3 HOH A 89 689 689 HOH TIP . C 3 HOH A 90 690 690 HOH TIP . C 3 HOH A 91 691 691 HOH TIP . C 3 HOH A 92 692 692 HOH TIP . C 3 HOH A 93 693 693 HOH TIP . C 3 HOH A 94 694 694 HOH TIP . C 3 HOH A 95 695 695 HOH TIP . C 3 HOH A 96 696 696 HOH TIP . C 3 HOH A 97 697 697 HOH TIP . C 3 HOH A 98 698 698 HOH TIP . C 3 HOH A 99 699 699 HOH TIP . C 3 HOH A 100 700 700 HOH TIP . C 3 HOH A 101 701 701 HOH TIP . C 3 HOH A 102 702 702 HOH TIP . C 3 HOH A 103 703 703 HOH TIP . C 3 HOH A 104 704 704 HOH TIP . C 3 HOH A 105 705 705 HOH TIP . C 3 HOH A 106 706 706 HOH TIP . C 3 HOH A 107 707 707 HOH TIP . C 3 HOH A 108 708 708 HOH TIP . C 3 HOH A 109 709 709 HOH TIP . C 3 HOH A 110 710 710 HOH TIP . C 3 HOH A 111 711 711 HOH TIP . C 3 HOH A 112 712 712 HOH TIP . C 3 HOH A 113 713 713 HOH TIP . C 3 HOH A 114 714 714 HOH TIP . C 3 HOH A 115 715 715 HOH TIP . C 3 HOH A 116 716 716 HOH TIP . C 3 HOH A 117 717 717 HOH TIP . C 3 HOH A 118 718 718 HOH TIP . C 3 HOH A 119 719 719 HOH TIP . C 3 HOH A 120 720 720 HOH TIP . C 3 HOH A 121 721 721 HOH TIP . C 3 HOH A 122 722 722 HOH TIP . C 3 HOH A 123 723 723 HOH TIP . C 3 HOH A 124 724 724 HOH TIP . C 3 HOH A 125 725 725 HOH TIP . C 3 HOH A 126 726 726 HOH TIP . C 3 HOH A 127 727 727 HOH TIP . C 3 HOH A 128 728 728 HOH TIP . C 3 HOH A 129 729 729 HOH TIP . C 3 HOH A 130 730 730 HOH TIP . C 3 HOH A 131 731 731 HOH TIP . C 3 HOH A 132 732 732 HOH TIP . C 3 HOH A 133 733 733 HOH TIP . C 3 HOH A 134 734 734 HOH TIP . C 3 HOH A 135 735 735 HOH TIP . C 3 HOH A 136 736 736 HOH TIP . C 3 HOH A 137 737 737 HOH TIP . C 3 HOH A 138 738 738 HOH TIP . C 3 HOH A 139 739 739 HOH TIP . C 3 HOH A 140 740 740 HOH TIP . C 3 HOH A 141 741 741 HOH TIP . C 3 HOH A 142 742 742 HOH TIP . C 3 HOH A 143 743 743 HOH TIP . C 3 HOH A 144 744 744 HOH TIP . C 3 HOH A 145 745 745 HOH TIP . C 3 HOH A 146 746 746 HOH TIP . C 3 HOH A 147 747 747 HOH TIP . C 3 HOH A 148 748 748 HOH TIP . C 3 HOH A 149 749 749 HOH TIP . C 3 HOH A 150 750 750 HOH TIP . C 3 HOH A 151 751 751 HOH TIP . C 3 HOH A 152 752 752 HOH TIP . C 3 HOH A 153 753 753 HOH TIP . C 3 HOH A 154 754 754 HOH TIP . C 3 HOH A 155 755 755 HOH TIP . C 3 HOH A 156 756 756 HOH TIP . C 3 HOH A 157 757 757 HOH TIP . C 3 HOH A 158 758 758 HOH TIP . C 3 HOH A 159 759 759 HOH TIP . C 3 HOH A 160 760 760 HOH TIP . C 3 HOH A 161 761 761 HOH TIP . C 3 HOH A 162 762 762 HOH TIP . C 3 HOH A 163 763 763 HOH TIP . C 3 HOH A 164 764 764 HOH TIP . C 3 HOH A 165 765 765 HOH TIP . C 3 HOH A 166 766 766 HOH TIP . C 3 HOH A 167 767 767 HOH TIP . C 3 HOH A 168 768 768 HOH TIP . C 3 HOH A 169 769 769 HOH TIP . C 3 HOH A 170 770 770 HOH TIP . C 3 HOH A 171 771 771 HOH TIP . C 3 HOH A 172 772 772 HOH TIP . C 3 HOH A 173 773 773 HOH TIP . C 3 HOH A 174 774 774 HOH TIP . C 3 HOH A 175 775 775 HOH TIP . C 3 HOH A 176 776 776 HOH TIP . C 3 HOH A 177 777 777 HOH TIP . C 3 HOH A 178 778 778 HOH TIP . C 3 HOH A 179 779 779 HOH TIP . C 3 HOH A 180 780 780 HOH TIP . C 3 HOH A 181 781 781 HOH TIP . C 3 HOH A 182 782 782 HOH TIP . C 3 HOH A 183 783 783 HOH TIP . C 3 HOH A 184 784 784 HOH TIP . C 3 HOH A 185 785 785 HOH TIP . C 3 HOH A 186 786 786 HOH TIP . C 3 HOH A 187 787 787 HOH TIP . C 3 HOH A 188 788 788 HOH TIP . C 3 HOH A 189 789 789 HOH TIP . C 3 HOH A 190 790 790 HOH TIP . C 3 HOH A 191 791 791 HOH TIP . C 3 HOH A 192 792 792 HOH TIP . C 3 HOH A 193 793 793 HOH TIP . C 3 HOH A 194 794 794 HOH TIP . C 3 HOH A 195 795 795 HOH TIP . C 3 HOH A 196 796 796 HOH TIP . C 3 HOH A 197 797 797 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 44.835 _atom_site.Cartn_y 54.23 _atom_site.Cartn_z 42.11 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #